Gene annotation
Transcriptome id Sobic.003G024400.1
Synonym SnRK3.6, PKS18, Sb03g002340, SbCIPK20,CBL-interacting protein kinases, CIPK20
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
Interacting factor of CBLs (PubMedID : 19860013)
CAMK_KIN1/SNF1/Nim1_like.8 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt C4P7S9
Pfam PF14531 PF03822
Panther DB PTHR24347 PTHR24347:SF212
NCBI CDD KOG0583; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0007165; signal transduction


Orthologs (automatic annotation)
TAIR AT5G45820 : CBL-interacting protein kinase 20
RAP-DB (Rice) LOC_Os01g10890.1 : CAMK_KIN1/SNF1/Nim1_like.8 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a035877 , Zm00025a035878 , Zm00025a025296
Brachypodium PNT68191 , KQK03246 , KQK14076
Barley HORVU3Hr1G029350.11 , HORVU3Hr1G029350.8 , HORVU3Hr1G029350.9 , HORVU3Hr1G029350.2 , HORVU3Hr1G029350.3 , HORVU3Hr1G029350.4 , HORVU3Hr1G029350.5 , HORVU3Hr1G029350.6 , HORVU3Hr1G029350.7 , HORVU3Hr1G029350.12 , HORVU3Hr1G029350.13 , HORVU3Hr1G029350.10 , HORVU3Hr1G029350.14 , HORVU3Hr1G029350.15 , HORVU5Hr1G093660.1
Wheat TraesCS3B02G330600
Populus -


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cDNA sequences
Sobic.003G024400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G106800 DUF221 domain containing protein, expressed -
2 Sobic.006G204400 maltose excess protein 1-like, chloroplast precursor, putative, expressed -
3 Sobic.007G086900 zinc finger, C3HC4 type domain containing protein, expressed -
4 Sobic.006G143900 transporter family protein, putative, expressed K08150: SLC2A13, MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13
5 Sobic.001G241401 - -
6 Sobic.002G030300 - -
7 Sobic.003G014200 protein kinase domain containing protein, expressed K08818: cell division cycle 2-like
8 Sobic.005G055700 - -
9 Sobic.002G111100 expressed protein -
10 Sobic.003G333100 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
11 Sobic.002G192800 - -
12 Sobic.003G042800 - -
13 Sobic.003G073540 - -
14 Sobic.007G176900 beta-galactosidase precursor, putative, expressed -
15 Sobic.002G295800 STRUBBELIG-RECEPTOR FAMILY 5 precursor, putative, expressed -
16 Sobic.006G097400 phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
17 Sobic.004G295050 - -
18 Sobic.006G026200 gamma-thionin family domain containing protein, expressed -
19 Sobic.008G056700 - -
20 Sobic.002G073600 transporter family protein, putative, expressed -


Gene co-expression network
sample Sobic003G024400 Sobic003G024400 Sobic001G106800 Sobic001G106800 Sobic003G024400--Sobic001G106800 Sobic006G204400 Sobic006G204400 Sobic003G024400--Sobic006G204400 Sobic007G086900 Sobic007G086900 Sobic003G024400--Sobic007G086900 Sobic006G143900 Sobic006G143900 Sobic003G024400--Sobic006G143900 Sobic001G241401 Sobic001G241401 Sobic003G024400--Sobic001G241401 Sobic002G030300 Sobic002G030300 Sobic003G024400--Sobic002G030300 Sobic003G014200 Sobic003G014200 Sobic003G024400--Sobic003G014200 Sobic005G055700 Sobic005G055700 Sobic003G024400--Sobic005G055700 Sobic002G111100 Sobic002G111100 Sobic003G024400--Sobic002G111100 Sobic001G106800--Sobic002G030300 Sobic001G106800--Sobic002G111100 Sobic002G011300 Sobic002G011300 Sobic001G106800--Sobic002G011300 Sobic009G060000 Sobic009G060000 Sobic001G106800--Sobic009G060000 Sobic003G290500 Sobic003G290500 Sobic001G106800--Sobic003G290500 Sobic001G409000 Sobic001G409000 Sobic001G106800--Sobic001G409000 Sobic007G001800 Sobic007G001800 Sobic001G106800--Sobic007G001800 Sobic004G217200 Sobic004G217200 Sobic001G106800--Sobic004G217200 Sobic004G049300 Sobic004G049300 Sobic001G106800--Sobic004G049300 Sobic006G204400--Sobic001G106800 Sobic006G001100 Sobic006G001100 Sobic006G204400--Sobic006G001100 Sobic007G176900 Sobic007G176900 Sobic006G204400--Sobic007G176900 Sobic008G136601 Sobic008G136601 Sobic006G204400--Sobic008G136601 Sobic006G097400 Sobic006G097400 Sobic006G204400--Sobic006G097400 Sobic006G204400--Sobic002G111100 Sobic001G163666 Sobic001G163666 Sobic006G204400--Sobic001G163666 Sobic008G103250 Sobic008G103250 Sobic006G204400--Sobic008G103250 Sobic006G204400--Sobic001G241401 Sobic003G042800 Sobic003G042800 Sobic007G086900--Sobic003G042800 Sobic007G086900--Sobic006G143900 Sobic004G295050 Sobic004G295050 Sobic007G086900--Sobic004G295050 Sobic004G134000 Sobic004G134000 Sobic007G086900--Sobic004G134000 Sobic003G333100 Sobic003G333100 Sobic007G086900--Sobic003G333100 Sobic007G086900--Sobic007G176900 Sobic004G099200 Sobic004G099200 Sobic007G086900--Sobic004G099200 Sobic009G158400 Sobic009G158400 Sobic007G086900--Sobic009G158400 Sobic006G259100 Sobic006G259100 Sobic007G086900--Sobic006G259100 Sobic004G273600 Sobic004G273600 Sobic006G143900--Sobic004G273600 Sobic005G145400 Sobic005G145400 Sobic006G143900--Sobic005G145400 Sobic006G143900--Sobic007G176900 Sobic001G135950 Sobic001G135950 Sobic006G143900--Sobic001G135950 Sobic006G143900--Sobic004G295050 Sobic010G001200 Sobic010G001200 Sobic006G143900--Sobic010G001200 Sobic005G037700 Sobic005G037700 Sobic006G143900--Sobic005G037700 Sobic003G420500 Sobic003G420500 Sobic006G143900--Sobic003G420500 Sobic006G143900--Sobic003G333100 Sobic001G241401--Sobic003G333100 Sobic003G111000 Sobic003G111000 Sobic001G241401--Sobic003G111000 Sobic001G412900 Sobic001G412900 Sobic001G241401--Sobic001G412900 Sobic006G236300 Sobic006G236300 Sobic001G241401--Sobic006G236300 Sobic010G162700 Sobic010G162700 Sobic001G241401--Sobic010G162700 Sobic006G195000 Sobic006G195000 Sobic001G241401--Sobic006G195000 Sobic007G112400 Sobic007G112400 Sobic001G241401--Sobic007G112400 Sobic005G110120 Sobic005G110120 Sobic001G241401--Sobic005G110120 Sobic009G169500 Sobic009G169500 Sobic001G241401--Sobic009G169500 Sobic001G228000 Sobic001G228000 Sobic002G030300--Sobic001G228000 Sobic002G197900 Sobic002G197900 Sobic002G030300--Sobic002G197900 Sobic003G164700 Sobic003G164700 Sobic002G030300--Sobic003G164700 Sobic007G057600 Sobic007G057600 Sobic002G030300--Sobic007G057600 Sobic008G119501 Sobic008G119501 Sobic002G030300--Sobic008G119501 Sobic006G237700 Sobic006G237700 Sobic002G030300--Sobic006G237700 Sobic003G335200 Sobic003G335200 Sobic002G030300--Sobic003G335200 Sobic002G030300--Sobic004G134000 Sobic003G073540 Sobic003G073540 Sobic002G030300--Sobic003G073540 Sobic002G073600 Sobic002G073600 Sobic003G014200--Sobic002G073600 Sobic009G256601 Sobic009G256601 Sobic003G014200--Sobic009G256601 Sobic005G054401 Sobic005G054401 Sobic003G014200--Sobic005G054401 Sobic003G133000 Sobic003G133000 Sobic003G014200--Sobic003G133000 Sobic001G269100 Sobic001G269100 Sobic003G014200--Sobic001G269100 Sobic003G351100 Sobic003G351100 Sobic003G014200--Sobic003G351100 Sobic010G240300 Sobic010G240300 Sobic003G014200--Sobic010G240300 Sobic006G005300 Sobic006G005300 Sobic003G014200--Sobic006G005300 Sobic007G160501 Sobic007G160501 Sobic003G014200--Sobic007G160501 Sobic001G094700 Sobic001G094700 Sobic005G055700--Sobic001G094700 Sobic002G111100--Sobic001G106800 Sobic002G111100--Sobic002G030300 Sobic002G372000 Sobic002G372000 Sobic002G111100--Sobic002G372000 Sobic001G254000 Sobic001G254000 Sobic002G111100--Sobic001G254000 Sobic002G384500 Sobic002G384500 Sobic002G111100--Sobic002G384500 Sobic008G056700 Sobic008G056700 Sobic002G111100--Sobic008G056700 Sobic010G124900 Sobic010G124900 Sobic002G111100--Sobic010G124900 Sobic003G243300 Sobic003G243300 Sobic002G111100--Sobic003G243300 Sobic002G295800 Sobic002G295800 Sobic002G111100--Sobic002G295800
Octagon: transcription factors


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