Gene annotation
Transcriptome id Sobic.002G074800.1
Synonym
Functional annotation -
UniProt A0A1B6Q9W1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G064200 STE_PAK_Ste20_STLK.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
2 Sobic.006G001100 ELMO/CED-12 family protein, putative, expressed -
3 Sobic.006G204400 maltose excess protein 1-like, chloroplast precursor, putative, expressed -
4 Sobic.008G136601 - -
5 Sobic.010G114200 katanin p60 ATPase-containing subunit, putative, expressed -
6 Sobic.006G143900 transporter family protein, putative, expressed K08150: SLC2A13, MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13
7 Sobic.004G228300 C2 domain containing protein, putative, expressed -
8 Sobic.005G048500 serine esterase family protein, putative, expressed -
9 Sobic.008G136700 expressed protein -
10 Sobic.001G340800 exocyst complex component 6, putative, expressed -
11 Sobic.009G229400 60S acidic ribosomal protein P0, putative, expressed K02941: RP-LP0, large subunit ribosomal protein LP0
12 Sobic.003G402800 DUF647 domain containing protein, putative, expressed -
13 Sobic.002G180800 puromycin-sensitive aminopeptidase, putative, expressed K08776: puromycin-sensitive aminopeptidase
14 Sobic.007G176900 beta-galactosidase precursor, putative, expressed -
15 Sobic.001G257200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
16 Sobic.003G385300 Ser/Thr protein phosphatase family protein, putative, expressed -
17 Sobic.002G389600 transcription regulator, putative, expressed -
18 Sobic.005G135100 expressed protein -
19 Sobic.003G024400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.8 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
20 Sobic.006G027601 - -


Gene co-expression network
sample Sobic002G074800 Sobic002G074800 Sobic004G064200 Sobic004G064200 Sobic002G074800--Sobic004G064200 Sobic006G001100 Sobic006G001100 Sobic002G074800--Sobic006G001100 Sobic006G204400 Sobic006G204400 Sobic002G074800--Sobic006G204400 Sobic008G136601 Sobic008G136601 Sobic002G074800--Sobic008G136601 Sobic010G114200 Sobic010G114200 Sobic002G074800--Sobic010G114200 Sobic006G143900 Sobic006G143900 Sobic002G074800--Sobic006G143900 Sobic004G228300 Sobic004G228300 Sobic002G074800--Sobic004G228300 Sobic005G048500 Sobic005G048500 Sobic002G074800--Sobic005G048500 Sobic008G136700 Sobic008G136700 Sobic002G074800--Sobic008G136700 Sobic004G064200--Sobic010G114200 Sobic003G014200 Sobic003G014200 Sobic004G064200--Sobic003G014200 Sobic004G064200--Sobic006G143900 Sobic010G179600 Sobic010G179600 Sobic004G064200--Sobic010G179600 Sobic009G068400 Sobic009G068400 Sobic004G064200--Sobic009G068400 Sobic001G117100 Sobic001G117100 Sobic004G064200--Sobic001G117100 Sobic001G225800 Sobic001G225800 Sobic004G064200--Sobic001G225800 Sobic009G152000 Sobic009G152000 Sobic004G064200--Sobic009G152000 Sobic008G036100 Sobic008G036100 Sobic004G064200--Sobic008G036100 Sobic006G001100--Sobic008G136601 Sobic007G176900 Sobic007G176900 Sobic006G001100--Sobic007G176900 Sobic006G027601 Sobic006G027601 Sobic006G001100--Sobic006G027601 Sobic003G333100 Sobic003G333100 Sobic006G001100--Sobic003G333100 Sobic009G061601 Sobic009G061601 Sobic006G001100--Sobic009G061601 Sobic006G205400 Sobic006G205400 Sobic006G001100--Sobic006G205400 Sobic002G295800 Sobic002G295800 Sobic006G001100--Sobic002G295800 Sobic003G175000 Sobic003G175000 Sobic006G001100--Sobic003G175000 Sobic002G254700 Sobic002G254700 Sobic006G001100--Sobic002G254700 Sobic001G106800 Sobic001G106800 Sobic006G204400--Sobic001G106800 Sobic006G204400--Sobic006G001100 Sobic006G204400--Sobic007G176900 Sobic006G204400--Sobic008G136601 Sobic006G097400 Sobic006G097400 Sobic006G204400--Sobic006G097400 Sobic002G111100 Sobic002G111100 Sobic006G204400--Sobic002G111100 Sobic001G163666 Sobic001G163666 Sobic006G204400--Sobic001G163666 Sobic008G103250 Sobic008G103250 Sobic006G204400--Sobic008G103250 Sobic001G241401 Sobic001G241401 Sobic006G204400--Sobic001G241401 Sobic008G136601--Sobic006G001100 Sobic006G269101 Sobic006G269101 Sobic008G136601--Sobic006G269101 Sobic008G136601--Sobic009G061601 Sobic001G212500 Sobic001G212500 Sobic008G136601--Sobic001G212500 Sobic005G043300 Sobic005G043300 Sobic008G136601--Sobic005G043300 Sobic001G165700 Sobic001G165700 Sobic008G136601--Sobic001G165700 Sobic002G126400 Sobic002G126400 Sobic008G136601--Sobic002G126400 Sobic007G131000 Sobic007G131000 Sobic008G136601--Sobic007G131000 Sobic003G445300 Sobic003G445300 Sobic008G136601--Sobic003G445300 Sobic005G055700 Sobic005G055700 Sobic010G114200--Sobic005G055700 Sobic010G114200--Sobic003G014200 Sobic006G150300 Sobic006G150300 Sobic010G114200--Sobic006G150300 Sobic010G114200--Sobic001G241401 Sobic010G114200--Sobic001G225800 Sobic002G060000 Sobic002G060000 Sobic010G114200--Sobic002G060000 Sobic007G133800 Sobic007G133800 Sobic010G114200--Sobic007G133800 Sobic010G114200--Sobic002G126400 Sobic010G114200--Sobic006G143900 Sobic004G273600 Sobic004G273600 Sobic006G143900--Sobic004G273600 Sobic005G145400 Sobic005G145400 Sobic006G143900--Sobic005G145400 Sobic006G143900--Sobic007G176900 Sobic001G135950 Sobic001G135950 Sobic006G143900--Sobic001G135950 Sobic004G295050 Sobic004G295050 Sobic006G143900--Sobic004G295050 Sobic010G001200 Sobic010G001200 Sobic006G143900--Sobic010G001200 Sobic005G037700 Sobic005G037700 Sobic006G143900--Sobic005G037700 Sobic003G420500 Sobic003G420500 Sobic006G143900--Sobic003G420500 Sobic006G143900--Sobic003G333100 Sobic004G228300--Sobic006G143900 Sobic005G214700 Sobic005G214700 Sobic004G228300--Sobic005G214700 Sobic002G104801 Sobic002G104801 Sobic004G228300--Sobic002G104801 Sobic010G190500 Sobic010G190500 Sobic004G228300--Sobic010G190500 Sobic002G157900 Sobic002G157900 Sobic004G228300--Sobic002G157900 Sobic003G145300 Sobic003G145300 Sobic004G228300--Sobic003G145300 Sobic009G090400 Sobic009G090400 Sobic004G228300--Sobic009G090400 Sobic001G332200 Sobic001G332200 Sobic004G228300--Sobic001G332200 Sobic007G222200 Sobic007G222200 Sobic004G228300--Sobic007G222200 Sobic009G206100 Sobic009G206100 Sobic005G048500--Sobic009G206100 Sobic005G048500--Sobic006G150300 Sobic005G048500--Sobic006G001100 Sobic009G229400 Sobic009G229400 Sobic005G048500--Sobic009G229400 Sobic006G193400 Sobic006G193400 Sobic005G048500--Sobic006G193400 Sobic005G048500--Sobic002G074800 Sobic005G048500--Sobic006G143900 Sobic005G048500--Sobic006G204400 Sobic005G048500--Sobic010G114200 Sobic008G136700--Sobic006G204400 Sobic006G028600 Sobic006G028600 Sobic008G136700--Sobic006G028600 Sobic004G002300 Sobic004G002300 Sobic008G136700--Sobic004G002300 Sobic008G136700--Sobic006G143900 Sobic008G136700--Sobic008G136601 Sobic008G136700--Sobic006G001100 Sobic008G136700--Sobic009G229400 Sobic001G315000 Sobic001G315000 Sobic008G136700--Sobic001G315000 Sobic008G136700--Sobic001G106800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.