Gene annotation
Transcriptome id Sobic.009G229400.1
Synonym Sb09g028230
Functional annotation 60S acidic ribosomal protein P0, putative, expressed
UniProt C5YVH3
Pfam PF00428 PF00466
Panther DB PTHR21141 PTHR21141:SF3
NCBI CDD KOG0815; 60S acidic ribosomal protein P0
KEGG Orthology K02941; RP-LP0, large subunit ribosomal protein LP0
Gene Ontology GO:0005622; intracellular


Orthologs (automatic annotation)
TAIR AT2G40010 : Ribosomal protein L10 family protein
RAP-DB (Rice) LOC_Os08g03640.1 : 60S acidic ribosomal protein P0, putative, expressed
MaizeGDB (Corn) Zm00025a030170 , Zm00025a040397
Brachypodium KQJ83585 , KQJ94958 , PNT66996
Barley HORVU0Hr1G038820.3 , HORVU0Hr1G038820.2 , HORVU0Hr1G038820.1 , HORVU0Hr1G038820.5 , HORVU0Hr1G038820.4 , HORVU7Hr1G073720.8 , HORVU7Hr1G073720.9 , HORVU7Hr1G073720.2 , HORVU7Hr1G073720.3 , HORVU7Hr1G073720.1 , HORVU7Hr1G073720.6 , HORVU7Hr1G073720.7 , HORVU7Hr1G073720.4 , HORVU7Hr1G073720.5 , HORVU7Hr1G073720.10 , HORVU7Hr1G073720.11 , HORVU7Hr1G073720.12
Wheat TraesCS4D02G106300 , TraesCS7B02G209900 , TraesCS7B02G209900 , TraesCS7B02G218300 , TraesCS4B02G109200 , TraesCS7A02G309900 , TraesCS7D02G306600
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G029800 expressed protein -
2 Sobic.010G266600 calcium-dependent protein kinase CPK1 adapter protein 2, putative, expressed -
3 Sobic.010G038300 OsFBDUF33 - F-box and DUF domain containing protein, expressed -
4 Sobic.002G192800 - -
5 Sobic.006G204400 maltose excess protein 1-like, chloroplast precursor, putative, expressed -
6 Sobic.008G071800 - -
7 Sobic.005G174750 - -
8 Sobic.006G070032 - K01193: INV, beta-fructofuranosidase
9 Sobic.002G060101 - -
10 Sobic.006G204500 pectinacetylesterase domain containing protein, expressed -
11 Sobic.001G106800 DUF221 domain containing protein, expressed -
12 Sobic.004G014200 serpin domain containing protein, putative, expressed K13963: serpin B
13 Sobic.008G020800 GASR10 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
14 Sobic.002G307400 MATH domain containing protein, expressed -
15 Sobic.004G100300 plastocyanin-like domain containing protein, putative, expressed -
16 Sobic.007G063800 - -
17 Sobic.006G266400 B3 DNA binding domain containing protein, expressed -
18 Sobic.005G221675 - -
19 Sobic.002G384900 expressed protein -
20 Sobic.002G015900 OsFBLD4 - F-box, LRR and FBD domain containing protein, expressed -


Gene co-expression network
sample Sobic009G229400 Sobic009G229400 Sobic008G029800 Sobic008G029800 Sobic009G229400--Sobic008G029800 Sobic010G266600 Sobic010G266600 Sobic009G229400--Sobic010G266600 Sobic010G038300 Sobic010G038300 Sobic009G229400--Sobic010G038300 Sobic002G192800 Sobic002G192800 Sobic009G229400--Sobic002G192800 Sobic006G204400 Sobic006G204400 Sobic009G229400--Sobic006G204400 Sobic008G071800 Sobic008G071800 Sobic009G229400--Sobic008G071800 Sobic005G174750 Sobic005G174750 Sobic009G229400--Sobic005G174750 Sobic006G070032 Sobic006G070032 Sobic009G229400--Sobic006G070032 Sobic002G060101 Sobic002G060101 Sobic009G229400--Sobic002G060101 Sobic009G060100 Sobic009G060100 Sobic008G029800--Sobic009G060100 Sobic008G029800--Sobic006G070032 Sobic002G070100 Sobic002G070100 Sobic008G029800--Sobic002G070100 Sobic006G017900 Sobic006G017900 Sobic008G029800--Sobic006G017900 Sobic007G082100 Sobic007G082100 Sobic008G029800--Sobic007G082100 Sobic004G046700 Sobic004G046700 Sobic008G029800--Sobic004G046700 Sobic001G211700 Sobic001G211700 Sobic008G029800--Sobic001G211700 Sobic010G123800 Sobic010G123800 Sobic008G029800--Sobic010G123800 Sobic006G017700 Sobic006G017700 Sobic008G029800--Sobic006G017700 Sobic002G307400 Sobic002G307400 Sobic010G266600--Sobic002G307400 Sobic005G221675 Sobic005G221675 Sobic010G266600--Sobic005G221675 Sobic004G100300 Sobic004G100300 Sobic010G266600--Sobic004G100300 Sobic010G266600--Sobic006G070032 Sobic010G266600--Sobic008G029800 Sobic002G384900 Sobic002G384900 Sobic010G266600--Sobic002G384900 Sobic006G200300 Sobic006G200300 Sobic010G266600--Sobic006G200300 Sobic007G081800 Sobic007G081800 Sobic010G266600--Sobic007G081800 Sobic007G198900 Sobic007G198900 Sobic010G266600--Sobic007G198900 Sobic007G063800 Sobic007G063800 Sobic010G038300--Sobic007G063800 Sobic005G202901 Sobic005G202901 Sobic010G038300--Sobic005G202901 Sobic004G014200 Sobic004G014200 Sobic010G038300--Sobic004G014200 Sobic010G038300--Sobic002G060101 Sobic010G038300--Sobic006G070032 Sobic010G038300--Sobic008G029800 Sobic010G038300--Sobic010G266600 Sobic006G204500 Sobic006G204500 Sobic010G038300--Sobic006G204500 Sobic008G020800 Sobic008G020800 Sobic010G038300--Sobic008G020800 Sobic002G192800--Sobic002G384900 Sobic002G192800--Sobic006G017900 Sobic002G192800--Sobic006G017700 Sobic002G182701 Sobic002G182701 Sobic002G192800--Sobic002G182701 Sobic002G192800--Sobic001G211700 Sobic002G192800--Sobic004G100300 Sobic002G192800--Sobic005G221675 Sobic002G192800--Sobic004G046700 Sobic005G140900 Sobic005G140900 Sobic002G192800--Sobic005G140900 Sobic001G106800 Sobic001G106800 Sobic006G204400--Sobic001G106800 Sobic006G001100 Sobic006G001100 Sobic006G204400--Sobic006G001100 Sobic007G176900 Sobic007G176900 Sobic006G204400--Sobic007G176900 Sobic008G136601 Sobic008G136601 Sobic006G204400--Sobic008G136601 Sobic006G097400 Sobic006G097400 Sobic006G204400--Sobic006G097400 Sobic002G111100 Sobic002G111100 Sobic006G204400--Sobic002G111100 Sobic001G163666 Sobic001G163666 Sobic006G204400--Sobic001G163666 Sobic008G103250 Sobic008G103250 Sobic006G204400--Sobic008G103250 Sobic001G241401 Sobic001G241401 Sobic006G204400--Sobic001G241401 Sobic004G168200 Sobic004G168200 Sobic008G071800--Sobic004G168200 Sobic008G071800--Sobic007G081800 Sobic008G071800--Sobic004G046700 Sobic005G058300 Sobic005G058300 Sobic008G071800--Sobic005G058300 Sobic008G071800--Sobic010G123800 Sobic008G071800--Sobic007G082100 Sobic008G071800--Sobic002G307400 Sobic008G071800--Sobic001G211700 Sobic008G071800--Sobic002G384900 Sobic005G174750--Sobic009G229400 Sobic007G128000 Sobic007G128000 Sobic005G174750--Sobic007G128000 Sobic004G228300 Sobic004G228300 Sobic005G174750--Sobic004G228300 Sobic001G417700 Sobic001G417700 Sobic005G174750--Sobic001G417700 Sobic006G266400 Sobic006G266400 Sobic005G174750--Sobic006G266400 Sobic002G189500 Sobic002G189500 Sobic005G174750--Sobic002G189500 Sobic005G174750--Sobic006G204400 Sobic005G174750--Sobic002G060101 Sobic001G240600 Sobic001G240600 Sobic005G174750--Sobic001G240600 Sobic002G156400 Sobic002G156400 Sobic006G070032--Sobic002G156400 Sobic008G138400 Sobic008G138400 Sobic006G070032--Sobic008G138400 Sobic006G070032--Sobic008G020800 Sobic002G097300 Sobic002G097300 Sobic006G070032--Sobic002G097300 Sobic005G189100 Sobic005G189100 Sobic006G070032--Sobic005G189100 Sobic001G240700 Sobic001G240700 Sobic006G070032--Sobic001G240700 Sobic006G070032--Sobic005G140900 Sobic001G089300 Sobic001G089300 Sobic006G070032--Sobic001G089300 Sobic002G006200 Sobic002G006200 Sobic006G070032--Sobic002G006200 Sobic005G037600 Sobic005G037600 Sobic002G060101--Sobic005G037600 Sobic002G060101--Sobic006G266400 Sobic002G333001 Sobic002G333001 Sobic002G060101--Sobic002G333001 Sobic003G070400 Sobic003G070400 Sobic002G060101--Sobic003G070400 Sobic009G068400 Sobic009G068400 Sobic002G060101--Sobic009G068400 Sobic007G081100 Sobic007G081100 Sobic002G060101--Sobic007G081100 Sobic002G015900 Sobic002G015900 Sobic002G060101--Sobic002G015900 Sobic002G101600 Sobic002G101600 Sobic002G060101--Sobic002G101600 Sobic002G060101--Sobic005G140900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.