Gene annotation
Transcriptome id Sobic.002G103800.1
Synonym AT-GDI1, Sb02g008810, ATGDI1, GDI1
Functional annotation rab GDP dissociation inhibitor alpha, putative, expressed
UniProt C5X3H7
Pfam PF00996
Panther DB PTHR11787 PTHR11787:SF11
NCBI CDD -
KEGG Orthology K17255; Rab GDP dissociation inhibitor
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G44100 : guanosine nucleotide diphosphate dissociation inhibitor 1
RAP-DB (Rice) LOC_Os07g16970.1 : rab GDP dissociation inhibitor alpha, putative, expressed
MaizeGDB (Corn) Zm00025a013641 , Zm00025a037400 , Zm00025a039131 , Zm00025a043715 , Zm00025a015631 , Zm00025a037399
Brachypodium PNT76764 , KQK06220 , KQK22323 , KQK06219 , KQK20184
Barley HORVU1Hr1G064490.13 , HORVU4Hr1G059240.2 , HORVU1Hr1G064490.8 , HORVU4Hr1G059240.1 , HORVU4Hr1G059240.6 , HORVU4Hr1G059240.7 , HORVU4Hr1G059240.4 , HORVU1Hr1G064490.2 , HORVU4Hr1G059240.9 , HORVU1Hr1G064490.6 , HORVU1Hr1G064490.7 , HORVU1Hr1G064490.4 , HORVU1Hr1G064490.5 , HORVU5Hr1G009840.12 , HORVU5Hr1G009840.10 , HORVU5Hr1G009840.11 , HORVU5Hr1G009840.16 , HORVU4Hr1G059240.20 , HORVU5Hr1G009840.14 , HORVU5Hr1G009840.15 , HORVU5Hr1G009840.18 , HORVU1Hr1G064490.1 , HORVU1Hr1G064490.14 , HORVU1Hr1G064480.1 , HORVU1Hr1G064480.3 , HORVU1Hr1G064480.2 , HORVU1Hr1G064490.15 , HORVU1Hr1G064490.11 , HORVU1Hr1G064490.12 , HORVU5Hr1G009840.17 , HORVU4Hr1G059240.11 , HORVU4Hr1G059240.12 , HORVU4Hr1G059240.13 , HORVU4Hr1G059240.14 , HORVU4Hr1G059240.15 , HORVU4Hr1G059240.17 , HORVU4Hr1G059240.18 , HORVU4Hr1G059240.19 , HORVU4Hr1G059230.2 , HORVU5Hr1G009840.8 , HORVU5Hr1G009840.9 , HORVU4Hr1G059230.1 , HORVU1Hr1G064490.10 , HORVU5Hr1G009840.1 , HORVU5Hr1G009840.2 , HORVU5Hr1G009840.3 , HORVU5Hr1G009840.4 , HORVU5Hr1G009840.5 , HORVU5Hr1G009840.6 , HORVU5Hr1G009840.7
Wheat TraesCS1B02G271800 , TraesCS1B02G271800 , TraesCS5A02G041100 , TraesCS1B02G271700 , TraesCS1B02G271700 , TraesCS4B02G205900 , TraesCS1D02G260900 , TraesCS1D02G260900 , TraesCS4A02G098400 , TraesCS4A02G098400 , TraesCS1A02G261000 , TraesCS1A02G261000 , TraesCS4D02G206900 , TraesCS1A02G260900 , TraesCS1A02G260900 , TraesCS5B02G042400 , TraesCS5D02G048100 , TraesCS1D02G261000
Populus PNT28910


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cDNA sequences
Sobic.002G103800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G114200 katanin p60 ATPase-containing subunit, putative, expressed -
2 Sobic.006G150300 expressed protein -
3 Sobic.001G241401 - -
4 Sobic.007G112500 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
5 Sobic.005G135100 expressed protein -
6 Sobic.004G064200 STE_PAK_Ste20_STLK.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
7 Sobic.007G176900 beta-galactosidase precursor, putative, expressed -
8 Sobic.004G042501 - -
9 Sobic.006G097400 phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
10 Sobic.007G070900 OsFBL43 - F-box domain and LRR containing protein, expressed -
11 Sobic.009G206100 expressed protein -
12 Sobic.003G333100 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
13 Sobic.005G003700 - -
14 Sobic.006G143900 transporter family protein, putative, expressed K08150: SLC2A13, MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13
15 Sobic.005G054401 - -
16 Sobic.009G152000 Yip1 domain containing protein, expressed -
17 Sobic.002G106600 OsFBLD5 - F-box, LRR and FBD domain containing protein, expressed -
18 Sobic.001G225800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@CCT motif family protein, expressed -
19 Sobic.002G060000 OsFBX237 - F-box domain containing protein, expressed -
20 Sobic.005G110460 - -


Gene co-expression network
sample Sobic002G103800 Sobic002G103800 Sobic010G114200 Sobic010G114200 Sobic002G103800--Sobic010G114200 Sobic006G150300 Sobic006G150300 Sobic002G103800--Sobic006G150300 Sobic001G241401 Sobic001G241401 Sobic002G103800--Sobic001G241401 Sobic007G112500 Sobic007G112500 Sobic002G103800--Sobic007G112500 Sobic005G135100 Sobic005G135100 Sobic002G103800--Sobic005G135100 Sobic004G064200 Sobic004G064200 Sobic002G103800--Sobic004G064200 Sobic007G176900 Sobic007G176900 Sobic002G103800--Sobic007G176900 Sobic004G042501 Sobic004G042501 Sobic002G103800--Sobic004G042501 Sobic006G097400 Sobic006G097400 Sobic002G103800--Sobic006G097400 Sobic005G055700 Sobic005G055700 Sobic010G114200--Sobic005G055700 Sobic003G014200 Sobic003G014200 Sobic010G114200--Sobic003G014200 Sobic010G114200--Sobic006G150300 Sobic010G114200--Sobic001G241401 Sobic001G225800 Sobic001G225800 Sobic010G114200--Sobic001G225800 Sobic002G060000 Sobic002G060000 Sobic010G114200--Sobic002G060000 Sobic007G133800 Sobic007G133800 Sobic010G114200--Sobic007G133800 Sobic002G126400 Sobic002G126400 Sobic010G114200--Sobic002G126400 Sobic006G143900 Sobic006G143900 Sobic010G114200--Sobic006G143900 Sobic003G333100 Sobic003G333100 Sobic006G150300--Sobic003G333100 Sobic001G333700 Sobic001G333700 Sobic006G150300--Sobic001G333700 Sobic002G106600 Sobic002G106600 Sobic006G150300--Sobic002G106600 Sobic004G290600 Sobic004G290600 Sobic006G150300--Sobic004G290600 Sobic006G150300--Sobic007G176900 Sobic006G150300--Sobic001G241401 Sobic006G205400 Sobic006G205400 Sobic006G150300--Sobic006G205400 Sobic008G176500 Sobic008G176500 Sobic006G150300--Sobic008G176500 Sobic005G114201 Sobic005G114201 Sobic006G150300--Sobic005G114201 Sobic001G241401--Sobic003G333100 Sobic003G111000 Sobic003G111000 Sobic001G241401--Sobic003G111000 Sobic001G412900 Sobic001G412900 Sobic001G241401--Sobic001G412900 Sobic006G236300 Sobic006G236300 Sobic001G241401--Sobic006G236300 Sobic010G162700 Sobic010G162700 Sobic001G241401--Sobic010G162700 Sobic006G195000 Sobic006G195000 Sobic001G241401--Sobic006G195000 Sobic007G112400 Sobic007G112400 Sobic001G241401--Sobic007G112400 Sobic005G110120 Sobic005G110120 Sobic001G241401--Sobic005G110120 Sobic009G169500 Sobic009G169500 Sobic001G241401--Sobic009G169500 Sobic005G043300 Sobic005G043300 Sobic007G112500--Sobic005G043300 Sobic003G351100 Sobic003G351100 Sobic007G112500--Sobic003G351100 Sobic007G035200 Sobic007G035200 Sobic007G112500--Sobic007G035200 Sobic006G020400 Sobic006G020400 Sobic007G112500--Sobic006G020400 Sobic005G006400 Sobic005G006400 Sobic007G112500--Sobic005G006400 Sobic008G125801 Sobic008G125801 Sobic007G112500--Sobic008G125801 Sobic002G194300 Sobic002G194300 Sobic007G112500--Sobic002G194300 Sobic010G240300 Sobic010G240300 Sobic007G112500--Sobic010G240300 Sobic003G007650 Sobic003G007650 Sobic007G112500--Sobic003G007650 Sobic005G135100--Sobic002G106600 Sobic002G257001 Sobic002G257001 Sobic005G135100--Sobic002G257001 Sobic005G135100--Sobic007G176900 Sobic005G135100--Sobic004G042501 Sobic007G070900 Sobic007G070900 Sobic005G135100--Sobic007G070900 Sobic005G135100--Sobic007G112500 Sobic005G135100--Sobic001G333700 Sobic005G003700 Sobic005G003700 Sobic005G135100--Sobic005G003700 Sobic004G308800 Sobic004G308800 Sobic005G135100--Sobic004G308800 Sobic004G064200--Sobic010G114200 Sobic004G064200--Sobic003G014200 Sobic004G064200--Sobic006G143900 Sobic010G179600 Sobic010G179600 Sobic004G064200--Sobic010G179600 Sobic009G068400 Sobic009G068400 Sobic004G064200--Sobic009G068400 Sobic001G117100 Sobic001G117100 Sobic004G064200--Sobic001G117100 Sobic004G064200--Sobic001G225800 Sobic009G152000 Sobic009G152000 Sobic004G064200--Sobic009G152000 Sobic008G036100 Sobic008G036100 Sobic004G064200--Sobic008G036100 Sobic007G176900--Sobic006G205400 Sobic007G176900--Sobic003G333100 Sobic001G212500 Sobic001G212500 Sobic007G176900--Sobic001G212500 Sobic010G144700 Sobic010G144700 Sobic007G176900--Sobic010G144700 Sobic007G176900--Sobic001G333700 Sobic001G093100 Sobic001G093100 Sobic007G176900--Sobic001G093100 Sobic005G040700 Sobic005G040700 Sobic007G176900--Sobic005G040700 Sobic010G051000 Sobic010G051000 Sobic007G176900--Sobic010G051000 Sobic001G288400 Sobic001G288400 Sobic007G176900--Sobic001G288400 Sobic001G488950 Sobic001G488950 Sobic004G042501--Sobic001G488950 Sobic004G042501--Sobic001G333700 Sobic001G094700 Sobic001G094700 Sobic004G042501--Sobic001G094700 Sobic007G129800 Sobic007G129800 Sobic006G097400--Sobic007G129800 Sobic010G107800 Sobic010G107800 Sobic006G097400--Sobic010G107800 Sobic002G414300 Sobic002G414300 Sobic006G097400--Sobic002G414300 Sobic005G054401 Sobic005G054401 Sobic006G097400--Sobic005G054401 Sobic001G269700 Sobic001G269700 Sobic006G097400--Sobic001G269700 Sobic001G269600 Sobic001G269600 Sobic006G097400--Sobic001G269600 Sobic001G269200 Sobic001G269200 Sobic006G097400--Sobic001G269200 Sobic001G269400 Sobic001G269400 Sobic006G097400--Sobic001G269400 Sobic006G097400--Sobic001G094700
Octagon: transcription factors


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