Gene annotation
Transcriptome id Sobic.001G149000.1,Sobic.001G149000.3,Sobic.001G149000.2
Synonym FRS5
Functional annotation FAR1 family protein, expressed
UniProt Q8W0Q6 , A0A1Z5S672 , A0A1Z5S5P7 , A0A1Z5S5M8
Pfam PF04434 PF10551 PF03101
Panther DB PTHR31669 PTHR31669:SF54
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0006355regulation of transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT4G38180 : FAR1-related sequence 5
RAP-DB (Rice) LOC_Os03g45300.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) -
Brachypodium KQK13910
Barley HORVU4Hr1G002250.1 , HORVU4Hr1G002250.3 , HORVU4Hr1G002250.2 , HORVU4Hr1G002250.4
Wheat -
Populus -


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cDNA sequences
Sobic.001G149000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G077300 guanine nucleotide exchange family protein, putative, expressed K18442: ARFGEF, brefeldin A-inhibited guanine nucleotide-exchange protein
2 Sobic.008G152700 expressed protein K07541: GPI mannosyltransferase 1 subunit X
3 Sobic.003G385300 Ser/Thr protein phosphatase family protein, putative, expressed -
4 Sobic.009G046900 N-acetylglucosaminyltransferase, putative, expressed -
5 Sobic.001G384200 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
6 Sobic.009G178400 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
7 Sobic.001G280500 abscisic acid insensitive 8, putative, expressed -
8 Sobic.008G166100 glycosyl transferase family 17 protein, putative, expressed K00737: beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
9 Sobic.001G387300 exostosin family domain containing protein, expressed -
10 Sobic.003G428000 expressed protein -
11 Sobic.007G039200 MYB family transcription factor, putative, expressed -
12 Sobic.005G063200 expressed protein -
13 Sobic.006G134500 calcium-binding mitochondrial protein anon-60Da, putative, expressed K17800: LETM1, LETM1 and EF-hand domain-containing protein 1, mitochondrial
14 Sobic.003G117800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
15 Sobic.001G385000 nucleoside-triphosphatase, putative, expressed K14641: apyrase
16 Sobic.004G350700 kelch repeat protein, putative, expressed -
17 Sobic.006G265800 OsFBX154 - F-box domain containing protein, expressed -
18 Sobic.001G340800 exocyst complex component 6, putative, expressed -
19 Sobic.003G024100 MRH1, putative, expressed -
20 Sobic.001G424800 myosin heavy chain-related, putative, expressed -


Gene co-expression network
sample Sobic001G149000 Sobic001G149000 Sobic004G077300 Sobic004G077300 Sobic001G149000--Sobic004G077300 Sobic008G152700 Sobic008G152700 Sobic001G149000--Sobic008G152700 Sobic003G385300 Sobic003G385300 Sobic001G149000--Sobic003G385300 Sobic009G046900 Sobic009G046900 Sobic001G149000--Sobic009G046900 Sobic001G384200 Sobic001G384200 Sobic001G149000--Sobic001G384200 Sobic009G178400 Sobic009G178400 Sobic001G149000--Sobic009G178400 Sobic001G280500 Sobic001G280500 Sobic001G149000--Sobic001G280500 Sobic008G166100 Sobic008G166100 Sobic001G149000--Sobic008G166100 Sobic001G387300 Sobic001G387300 Sobic001G149000--Sobic001G387300 Sobic004G077300--Sobic001G149000 Sobic004G077300--Sobic003G385300 Sobic004G077300--Sobic008G152700 Sobic004G176200 Sobic004G176200 Sobic004G077300--Sobic004G176200 Sobic001G378800 Sobic001G378800 Sobic004G077300--Sobic001G378800 Sobic006G080700 Sobic006G080700 Sobic004G077300--Sobic006G080700 Sobic004G077300--Sobic001G384200 Sobic004G350700 Sobic004G350700 Sobic004G077300--Sobic004G350700 Sobic002G180800 Sobic002G180800 Sobic004G077300--Sobic002G180800 Sobic008G152700--Sobic001G149000 Sobic008G152700--Sobic003G385300 Sobic003G117800 Sobic003G117800 Sobic008G152700--Sobic003G117800 Sobic008G152700--Sobic004G077300 Sobic008G152700--Sobic009G046900 Sobic007G172700 Sobic007G172700 Sobic008G152700--Sobic007G172700 Sobic003G428000 Sobic003G428000 Sobic008G152700--Sobic003G428000 Sobic003G394500 Sobic003G394500 Sobic008G152700--Sobic003G394500 Sobic001G385000 Sobic001G385000 Sobic008G152700--Sobic001G385000 Sobic003G385300--Sobic001G149000 Sobic003G402800 Sobic003G402800 Sobic003G385300--Sobic003G402800 Sobic003G385300--Sobic004G077300 Sobic004G064200 Sobic004G064200 Sobic003G385300--Sobic004G064200 Sobic003G385300--Sobic004G176200 Sobic001G257800 Sobic001G257800 Sobic003G385300--Sobic001G257800 Sobic005G225500 Sobic005G225500 Sobic003G385300--Sobic005G225500 Sobic007G039200 Sobic007G039200 Sobic003G385300--Sobic007G039200 Sobic002G074800 Sobic002G074800 Sobic003G385300--Sobic002G074800 Sobic009G046900--Sobic001G149000 Sobic009G046900--Sobic009G178400 Sobic002G233600 Sobic002G233600 Sobic009G046900--Sobic002G233600 Sobic006G134500 Sobic006G134500 Sobic009G046900--Sobic006G134500 Sobic009G046900--Sobic002G074800 Sobic009G046900--Sobic003G385300 Sobic009G046900--Sobic001G384200 Sobic006G193400 Sobic006G193400 Sobic009G046900--Sobic006G193400 Sobic003G358600 Sobic003G358600 Sobic009G046900--Sobic003G358600 Sobic003G024100 Sobic003G024100 Sobic001G384200--Sobic003G024100 Sobic001G340800 Sobic001G340800 Sobic001G384200--Sobic001G340800 Sobic001G384200--Sobic008G166100 Sobic001G384200--Sobic009G178400 Sobic001G370400 Sobic001G370400 Sobic001G384200--Sobic001G370400 Sobic003G244400 Sobic003G244400 Sobic001G384200--Sobic003G244400 Sobic001G432200 Sobic001G432200 Sobic001G384200--Sobic001G432200 Sobic003G175350 Sobic003G175350 Sobic001G384200--Sobic003G175350 Sobic001G384200--Sobic007G039200 Sobic009G178400--Sobic001G384200 Sobic009G178400--Sobic001G340800 Sobic009G178400--Sobic002G233600 Sobic009G178400--Sobic008G166100 Sobic009G178400--Sobic007G039200 Sobic007G048101 Sobic007G048101 Sobic009G178400--Sobic007G048101 Sobic009G178400--Sobic001G432200 Sobic001G308000 Sobic001G308000 Sobic009G178400--Sobic001G308000 Sobic002G088600 Sobic002G088600 Sobic009G178400--Sobic002G088600 Sobic002G414800 Sobic002G414800 Sobic001G280500--Sobic002G414800 Sobic001G280500--Sobic001G149000 Sobic005G063200 Sobic005G063200 Sobic001G280500--Sobic005G063200 Sobic001G280500--Sobic001G384200 Sobic001G280500--Sobic008G166100 Sobic008G022400 Sobic008G022400 Sobic001G280500--Sobic008G022400 Sobic010G160300 Sobic010G160300 Sobic001G280500--Sobic010G160300 Sobic001G424800 Sobic001G424800 Sobic001G280500--Sobic001G424800 Sobic006G265800 Sobic006G265800 Sobic001G280500--Sobic006G265800 Sobic008G166100--Sobic001G384200 Sobic008G166100--Sobic007G039200 Sobic008G166100--Sobic009G178400 Sobic001G322400 Sobic001G322400 Sobic008G166100--Sobic001G322400 Sobic008G166100--Sobic003G024100 Sobic009G202000 Sobic009G202000 Sobic008G166100--Sobic009G202000 Sobic008G166100--Sobic001G340800 Sobic008G166100--Sobic001G387300 Sobic008G166100--Sobic001G432200 Sobic001G387300--Sobic001G384200 Sobic001G387300--Sobic009G178400 Sobic001G387300--Sobic008G166100 Sobic001G387300--Sobic001G322400 Sobic004G113600 Sobic004G113600 Sobic001G387300--Sobic004G113600 Sobic001G387300--Sobic009G202000 Sobic001G387300--Sobic003G244400 Sobic001G072000 Sobic001G072000 Sobic001G387300--Sobic001G072000 Sobic001G387300--Sobic001G432200
Octagon: transcription factors


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