Gene annotation
Transcriptome id Sobic.001G280500.1
Synonym ELD1, Sb01g027600, ABI8, KOB1
Functional annotation abscisic acid insensitive 8, putative, expressed
UniProt C5WQK8
Pfam -
Panther DB PTHR10774 PTHR10774:SF95
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G08550 : elongation defective 1 protein / ELD1 protein
RAP-DB (Rice) LOC_Os01g13200.1 : abscisic acid insensitive 8, putative, expressed
MaizeGDB (Corn) Zm00025a003596
Brachypodium KQK08098
Barley HORVU1Hr1G000270.10 , HORVU1Hr1G007730.8 , HORVU1Hr1G007730.9 , HORVU1Hr1G007730.4 , HORVU1Hr1G007730.5 , HORVU1Hr1G007730.6 , HORVU1Hr1G007730.7 , HORVU1Hr1G007730.1 , HORVU1Hr1G007730.2 , HORVU1Hr1G007730.3 , HORVU1Hr1G000270.12 , HORVU1Hr1G007730.18 , HORVU1Hr1G000270.11 , HORVU1Hr1G007730.16 , HORVU1Hr1G007730.17 , HORVU1Hr1G007730.14 , HORVU1Hr1G007730.15 , HORVU1Hr1G007730.12 , HORVU1Hr1G007730.13 , HORVU1Hr1G007730.10 , HORVU1Hr1G007730.11 , HORVU1Hr1G000270.4 , HORVU1Hr1G000270.2 , HORVU1Hr1G000270.3 , HORVU1Hr1G000270.8 , HORVU1Hr1G000270.9 , HORVU1Hr1G007730.44 , HORVU1Hr1G007730.41 , HORVU1Hr1G007730.40 , HORVU1Hr1G007730.43 , HORVU1Hr1G007730.42 , HORVU1Hr1G007730.26 , HORVU1Hr1G007730.25 , HORVU1Hr1G007730.24 , HORVU1Hr1G007730.23 , HORVU1Hr1G007730.22 , HORVU1Hr1G007730.21 , HORVU1Hr1G007730.20 , HORVU1Hr1G007730.29 , HORVU1Hr1G007730.28 , HORVU1Hr1G000270.5 , HORVU1Hr1G000270.6 , HORVU1Hr1G000270.7 , HORVU1Hr1G000270.1 , HORVU1Hr1G007730.34 , HORVU1Hr1G007730.35 , HORVU1Hr1G007730.36 , HORVU1Hr1G007730.37 , HORVU1Hr1G007730.30 , HORVU1Hr1G007730.31 , HORVU1Hr1G007730.32 , HORVU1Hr1G007730.33 , HORVU1Hr1G007730.38 , HORVU1Hr1G007730.39
Wheat TraesCS1B02G002100 , TraesCSU02G143200 , TraesCS1D02G005200
Populus -


JBrowse

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cDNA sequences
Sobic.001G280500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G414800 PPR repeat domain containing protein, putative, expressed -
2 Sobic.001G149000 FAR1 family protein, expressed -
3 Sobic.005G063200 expressed protein -
4 Sobic.001G384200 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
5 Sobic.008G166100 glycosyl transferase family 17 protein, putative, expressed K00737: beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
6 Sobic.008G022400 EMB2748, putative, expressed -
7 Sobic.010G160300 RNA recognition motif containing protein, putative, expressed -
8 Sobic.001G424800 myosin heavy chain-related, putative, expressed -
9 Sobic.006G265800 OsFBX154 - F-box domain containing protein, expressed -
10 Sobic.009G252200 expressed protein K11644: paired amphipathic helix protein Sin3a
11 Sobic.003G385300 Ser/Thr protein phosphatase family protein, putative, expressed -
12 Sobic.001G387300 exostosin family domain containing protein, expressed -
13 Sobic.009G201000 hydrolase, acting on carbon-nitrogen, putative, expressed -
14 Sobic.002G304700 RFT1, putative, expressed K06316: oligosaccharide translocation protein RFT1
15 Sobic.002G213900 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
16 Sobic.005G185500 - -
17 Sobic.003G349900 50S ribosomal protein L17, putative, expressed K02879: RP-L17, MRPL17, large subunit ribosomal protein L17
18 Sobic.009G046900 N-acetylglucosaminyltransferase, putative, expressed -
19 Sobic.004G350700 kelch repeat protein, putative, expressed -
20 Sobic.006G232800 expressed protein K17785: IMMT, FCJ1, mitofilin


Gene co-expression network
sample Sobic001G280500 Sobic001G280500 Sobic002G414800 Sobic002G414800 Sobic001G280500--Sobic002G414800 Sobic001G149000 Sobic001G149000 Sobic001G280500--Sobic001G149000 Sobic005G063200 Sobic005G063200 Sobic001G280500--Sobic005G063200 Sobic001G384200 Sobic001G384200 Sobic001G280500--Sobic001G384200 Sobic008G166100 Sobic008G166100 Sobic001G280500--Sobic008G166100 Sobic008G022400 Sobic008G022400 Sobic001G280500--Sobic008G022400 Sobic010G160300 Sobic010G160300 Sobic001G280500--Sobic010G160300 Sobic001G424800 Sobic001G424800 Sobic001G280500--Sobic001G424800 Sobic006G265800 Sobic006G265800 Sobic001G280500--Sobic006G265800 Sobic002G414800--Sobic001G384200 Sobic002G414800--Sobic008G166100 Sobic002G414800--Sobic001G280500 Sobic002G414800--Sobic006G265800 Sobic006G134500 Sobic006G134500 Sobic002G414800--Sobic006G134500 Sobic001G400000 Sobic001G400000 Sobic002G414800--Sobic001G400000 Sobic004G007400 Sobic004G007400 Sobic002G414800--Sobic004G007400 Sobic001G387300 Sobic001G387300 Sobic002G414800--Sobic001G387300 Sobic002G362500 Sobic002G362500 Sobic002G414800--Sobic002G362500 Sobic004G077300 Sobic004G077300 Sobic001G149000--Sobic004G077300 Sobic008G152700 Sobic008G152700 Sobic001G149000--Sobic008G152700 Sobic003G385300 Sobic003G385300 Sobic001G149000--Sobic003G385300 Sobic009G046900 Sobic009G046900 Sobic001G149000--Sobic009G046900 Sobic001G149000--Sobic001G384200 Sobic009G178400 Sobic009G178400 Sobic001G149000--Sobic009G178400 Sobic001G149000--Sobic001G280500 Sobic001G149000--Sobic008G166100 Sobic001G149000--Sobic001G387300 Sobic005G063200--Sobic001G384200 Sobic005G063200--Sobic001G280500 Sobic005G063200--Sobic008G166100 Sobic003G211800 Sobic003G211800 Sobic005G063200--Sobic003G211800 Sobic005G063200--Sobic001G149000 Sobic001G076600 Sobic001G076600 Sobic005G063200--Sobic001G076600 Sobic002G097200 Sobic002G097200 Sobic005G063200--Sobic002G097200 Sobic005G063200--Sobic003G385300 Sobic009G106700 Sobic009G106700 Sobic005G063200--Sobic009G106700 Sobic003G024100 Sobic003G024100 Sobic001G384200--Sobic003G024100 Sobic001G340800 Sobic001G340800 Sobic001G384200--Sobic001G340800 Sobic001G384200--Sobic008G166100 Sobic001G384200--Sobic009G178400 Sobic001G370400 Sobic001G370400 Sobic001G384200--Sobic001G370400 Sobic003G244400 Sobic003G244400 Sobic001G384200--Sobic003G244400 Sobic001G432200 Sobic001G432200 Sobic001G384200--Sobic001G432200 Sobic003G175350 Sobic003G175350 Sobic001G384200--Sobic003G175350 Sobic007G039200 Sobic007G039200 Sobic001G384200--Sobic007G039200 Sobic008G166100--Sobic001G384200 Sobic008G166100--Sobic007G039200 Sobic008G166100--Sobic009G178400 Sobic001G322400 Sobic001G322400 Sobic008G166100--Sobic001G322400 Sobic008G166100--Sobic003G024100 Sobic009G202000 Sobic009G202000 Sobic008G166100--Sobic009G202000 Sobic008G166100--Sobic001G340800 Sobic008G166100--Sobic001G387300 Sobic008G166100--Sobic001G432200 Sobic008G022400--Sobic001G280500 Sobic008G022400--Sobic002G414800 Sobic002G213900 Sobic002G213900 Sobic008G022400--Sobic002G213900 Sobic010G086300 Sobic010G086300 Sobic008G022400--Sobic010G086300 Sobic010G153400 Sobic010G153400 Sobic008G022400--Sobic010G153400 Sobic008G022400--Sobic001G384200 Sobic008G022400--Sobic001G387300 Sobic008G022400--Sobic006G265800 Sobic008G022400--Sobic008G166100 Sobic002G304700 Sobic002G304700 Sobic010G160300--Sobic002G304700 Sobic010G160300--Sobic001G280500 Sobic010G160300--Sobic005G063200 Sobic001G114200 Sobic001G114200 Sobic010G160300--Sobic001G114200 Sobic001G501900 Sobic001G501900 Sobic010G160300--Sobic001G501900 Sobic004G350700 Sobic004G350700 Sobic010G160300--Sobic004G350700 Sobic002G007800 Sobic002G007800 Sobic010G160300--Sobic002G007800 Sobic003G117800 Sobic003G117800 Sobic010G160300--Sobic003G117800 Sobic010G160300--Sobic001G149000 Sobic001G424800--Sobic003G117800 Sobic003G058500 Sobic003G058500 Sobic001G424800--Sobic003G058500 Sobic001G424800--Sobic004G350700 Sobic001G356200 Sobic001G356200 Sobic001G424800--Sobic001G356200 Sobic001G424800--Sobic001G149000 Sobic001G424800--Sobic001G280500 Sobic003G394500 Sobic003G394500 Sobic001G424800--Sobic003G394500 Sobic001G424800--Sobic003G385300 Sobic001G378800 Sobic001G378800 Sobic001G424800--Sobic001G378800 Sobic006G265800--Sobic001G384200 Sobic006G265800--Sobic006G134500 Sobic006G265800--Sobic001G400000 Sobic009G163100 Sobic009G163100 Sobic006G265800--Sobic009G163100 Sobic009G201000 Sobic009G201000 Sobic006G265800--Sobic009G201000 Sobic006G265800--Sobic003G024100 Sobic008G156600 Sobic008G156600 Sobic006G265800--Sobic008G156600 Sobic006G265800--Sobic003G244400 Sobic008G007600 Sobic008G007600 Sobic006G265800--Sobic008G007600
Octagon: transcription factors


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