Gene annotation
Transcriptome id Sobic.002G213900.2,Sobic.002G213900.3,Sobic.002G213900.1
Synonym ATMFDX2, MFDX2
Functional annotation 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed
UniProt A0A1W0W574 , A0A1W0W5E1 , A0A1B6QCR2
Pfam PF00111
Panther DB PTHR23426 PTHR23426:SF31
NCBI CDD KOG3309; Ferredoxin
KEGG Orthology -
Gene Ontology GO:0009055; electron transfer activity


Orthologs (automatic annotation)
TAIR AT4G21090 : MITOCHONDRIAL FERREDOXIN 2
RAP-DB (Rice) LOC_Os09g26650.1 : 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a049677 , Zm00025a042441
Brachypodium KQJ90370
Barley HORVU5Hr1G062530.7 , HORVU5Hr1G062530.6 , HORVU5Hr1G062530.5 , HORVU5Hr1G062530.4 , HORVU5Hr1G062530.3 , HORVU5Hr1G062530.2 , HORVU5Hr1G062530.1 , HORVU5Hr1G062530.9 , HORVU5Hr1G062530.8
Wheat TraesCS5B02G212200 , TraesCS5D02G222200 , TraesCS5A02G211700
Populus -


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cDNA sequences
Sobic.002G213900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G134500 calcium-binding mitochondrial protein anon-60Da, putative, expressed K17800: LETM1, LETM1 and EF-hand domain-containing protein 1, mitochondrial
2 Sobic.001G384200 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
3 Sobic.009G178400 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
4 Sobic.003G385300 Ser/Thr protein phosphatase family protein, putative, expressed -
5 Sobic.004G113600 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
6 Sobic.001G387300 exostosin family domain containing protein, expressed -
7 Sobic.008G166100 glycosyl transferase family 17 protein, putative, expressed K00737: beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
8 Sobic.002G389600 transcription regulator, putative, expressed -
9 Sobic.006G265800 OsFBX154 - F-box domain containing protein, expressed -
10 Sobic.003G024100 MRH1, putative, expressed -
11 Sobic.001G340800 exocyst complex component 6, putative, expressed -
12 Sobic.001G149000 FAR1 family protein, expressed -
13 Sobic.009G046900 N-acetylglucosaminyltransferase, putative, expressed -
14 Sobic.009G201000 hydrolase, acting on carbon-nitrogen, putative, expressed -
15 Sobic.005G185500 - -
16 Sobic.009G156800 expressed protein -
17 Sobic.001G280500 abscisic acid insensitive 8, putative, expressed -
18 Sobic.006G001100 ELMO/CED-12 family protein, putative, expressed -
19 Sobic.007G039200 MYB family transcription factor, putative, expressed -
20 Sobic.009G242600 ATPCME, putative, expressed K15889: prenylcysteine alpha-carboxyl methylesterase


Gene co-expression network
sample Sobic002G213900 Sobic002G213900 Sobic006G134500 Sobic006G134500 Sobic002G213900--Sobic006G134500 Sobic001G384200 Sobic001G384200 Sobic002G213900--Sobic001G384200 Sobic009G178400 Sobic009G178400 Sobic002G213900--Sobic009G178400 Sobic003G385300 Sobic003G385300 Sobic002G213900--Sobic003G385300 Sobic004G113600 Sobic004G113600 Sobic002G213900--Sobic004G113600 Sobic001G387300 Sobic001G387300 Sobic002G213900--Sobic001G387300 Sobic008G166100 Sobic008G166100 Sobic002G213900--Sobic008G166100 Sobic002G389600 Sobic002G389600 Sobic002G213900--Sobic002G389600 Sobic006G265800 Sobic006G265800 Sobic002G213900--Sobic006G265800 Sobic006G134500--Sobic006G265800 Sobic006G134500--Sobic001G384200 Sobic003G024100 Sobic003G024100 Sobic006G134500--Sobic003G024100 Sobic004G194400 Sobic004G194400 Sobic006G134500--Sobic004G194400 Sobic001G400000 Sobic001G400000 Sobic006G134500--Sobic001G400000 Sobic006G134500--Sobic004G113600 Sobic001G340800 Sobic001G340800 Sobic006G134500--Sobic001G340800 Sobic003G175350 Sobic003G175350 Sobic006G134500--Sobic003G175350 Sobic006G071362 Sobic006G071362 Sobic006G134500--Sobic006G071362 Sobic001G384200--Sobic003G024100 Sobic001G384200--Sobic001G340800 Sobic001G384200--Sobic008G166100 Sobic001G384200--Sobic009G178400 Sobic001G370400 Sobic001G370400 Sobic001G384200--Sobic001G370400 Sobic003G244400 Sobic003G244400 Sobic001G384200--Sobic003G244400 Sobic001G432200 Sobic001G432200 Sobic001G384200--Sobic001G432200 Sobic001G384200--Sobic003G175350 Sobic007G039200 Sobic007G039200 Sobic001G384200--Sobic007G039200 Sobic009G178400--Sobic001G384200 Sobic009G178400--Sobic001G340800 Sobic002G233600 Sobic002G233600 Sobic009G178400--Sobic002G233600 Sobic009G178400--Sobic008G166100 Sobic009G178400--Sobic007G039200 Sobic007G048101 Sobic007G048101 Sobic009G178400--Sobic007G048101 Sobic009G178400--Sobic001G432200 Sobic001G308000 Sobic001G308000 Sobic009G178400--Sobic001G308000 Sobic002G088600 Sobic002G088600 Sobic009G178400--Sobic002G088600 Sobic001G149000 Sobic001G149000 Sobic003G385300--Sobic001G149000 Sobic003G402800 Sobic003G402800 Sobic003G385300--Sobic003G402800 Sobic004G077300 Sobic004G077300 Sobic003G385300--Sobic004G077300 Sobic004G064200 Sobic004G064200 Sobic003G385300--Sobic004G064200 Sobic004G176200 Sobic004G176200 Sobic003G385300--Sobic004G176200 Sobic001G257800 Sobic001G257800 Sobic003G385300--Sobic001G257800 Sobic005G225500 Sobic005G225500 Sobic003G385300--Sobic005G225500 Sobic003G385300--Sobic007G039200 Sobic002G074800 Sobic002G074800 Sobic003G385300--Sobic002G074800 Sobic001G112600 Sobic001G112600 Sobic004G113600--Sobic001G112600 Sobic004G113600--Sobic003G244400 Sobic004G358000 Sobic004G358000 Sobic004G113600--Sobic004G358000 Sobic009G242200 Sobic009G242200 Sobic004G113600--Sobic009G242200 Sobic002G170100 Sobic002G170100 Sobic004G113600--Sobic002G170100 Sobic005G050400 Sobic005G050400 Sobic004G113600--Sobic005G050400 Sobic004G113600--Sobic001G384200 Sobic004G113600--Sobic001G400000 Sobic005G054150 Sobic005G054150 Sobic004G113600--Sobic005G054150 Sobic001G387300--Sobic001G384200 Sobic001G387300--Sobic009G178400 Sobic001G387300--Sobic008G166100 Sobic001G322400 Sobic001G322400 Sobic001G387300--Sobic001G322400 Sobic001G387300--Sobic004G113600 Sobic009G202000 Sobic009G202000 Sobic001G387300--Sobic009G202000 Sobic001G387300--Sobic003G244400 Sobic001G072000 Sobic001G072000 Sobic001G387300--Sobic001G072000 Sobic001G387300--Sobic001G432200 Sobic008G166100--Sobic001G384200 Sobic008G166100--Sobic007G039200 Sobic008G166100--Sobic009G178400 Sobic008G166100--Sobic001G322400 Sobic008G166100--Sobic003G024100 Sobic008G166100--Sobic009G202000 Sobic008G166100--Sobic001G340800 Sobic008G166100--Sobic001G387300 Sobic008G166100--Sobic001G432200 Sobic008G136601 Sobic008G136601 Sobic002G389600--Sobic008G136601 Sobic008G148600 Sobic008G148600 Sobic002G389600--Sobic008G148600 Sobic006G069766 Sobic006G069766 Sobic002G389600--Sobic006G069766 Sobic009G061500 Sobic009G061500 Sobic002G389600--Sobic009G061500 Sobic002G389600--Sobic001G340800 Sobic003G304600 Sobic003G304600 Sobic002G389600--Sobic003G304600 Sobic006G105100 Sobic006G105100 Sobic002G389600--Sobic006G105100 Sobic002G389600--Sobic004G358000 Sobic002G380300 Sobic002G380300 Sobic002G389600--Sobic002G380300 Sobic006G265800--Sobic001G384200 Sobic006G265800--Sobic006G134500 Sobic006G265800--Sobic001G400000 Sobic009G163100 Sobic009G163100 Sobic006G265800--Sobic009G163100 Sobic009G201000 Sobic009G201000 Sobic006G265800--Sobic009G201000 Sobic006G265800--Sobic003G024100 Sobic008G156600 Sobic008G156600 Sobic006G265800--Sobic008G156600 Sobic006G265800--Sobic003G244400 Sobic008G007600 Sobic008G007600 Sobic006G265800--Sobic008G007600
Octagon: transcription factors


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