Gene annotation
Transcriptome id Sobic.008G022400.1
Synonym Sb08g002000
Functional annotation EMB2748, putative, expressed
UniProt A0A1B6PAS4
Pfam -
Panther DB PTHR24015 PTHR24015:SF716
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G04590 : -
RAP-DB (Rice) LOC_Os12g02950.1 : EMB2748, putative, expressed
MaizeGDB (Corn) Zm00025a053754
Brachypodium KQJ89493
Barley HORVU4Hr1G023670.18 , HORVU4Hr1G023670.19 , HORVU4Hr1G023670.14 , HORVU4Hr1G023670.15 , HORVU4Hr1G023670.16 , HORVU4Hr1G023670.17 , HORVU4Hr1G023670.10 , HORVU4Hr1G023670.11 , HORVU4Hr1G023670.12 , HORVU4Hr1G023670.13 , HORVU4Hr1G023670.6 , HORVU4Hr1G023670.7 , HORVU4Hr1G023670.4 , HORVU4Hr1G023670.5 , HORVU4Hr1G023670.2 , HORVU4Hr1G023670.3 , HORVU4Hr1G023670.1 , HORVU4Hr1G023670.8 , HORVU4Hr1G023670.9 , HORVU4Hr1G023670.20
Wheat TraesCS4D02G122300 , TraesCS4D02G122300 , TraesCS4B02G124400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G280500 abscisic acid insensitive 8, putative, expressed -
2 Sobic.002G414800 PPR repeat domain containing protein, putative, expressed -
3 Sobic.002G213900 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
4 Sobic.010G086300 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
5 Sobic.010G153400 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
6 Sobic.001G384200 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
7 Sobic.001G387300 exostosin family domain containing protein, expressed -
8 Sobic.006G265800 OsFBX154 - F-box domain containing protein, expressed -
9 Sobic.008G166100 glycosyl transferase family 17 protein, putative, expressed K00737: beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
10 Sobic.002G348400 adenylyl-sulfate kinase, putative, expressed K00860: adenylylsulfate kinase
11 Sobic.009G046900 N-acetylglucosaminyltransferase, putative, expressed -
12 Sobic.003G004800 ATP binding protein, putative, expressed -
13 Sobic.003G349900 50S ribosomal protein L17, putative, expressed K02879: RP-L17, MRPL17, large subunit ribosomal protein L17
14 Sobic.002G362500 expressed protein -
15 Sobic.010G277700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IPP transferase, putative, expressed K00791: miaA, tRNA dimethylallyltransferase
16 Sobic.006G134500 calcium-binding mitochondrial protein anon-60Da, putative, expressed K17800: LETM1, LETM1 and EF-hand domain-containing protein 1, mitochondrial
17 Sobic.001G149000 FAR1 family protein, expressed -
18 Sobic.009G178400 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
19 Sobic.006G232800 expressed protein K17785: IMMT, FCJ1, mitofilin
20 Sobic.001G400000 NAD dependent epimerase/dehydratase family protein, putative, expressed K12448: UXE, UDP-arabinose 4-epimerase


Gene co-expression network
sample Sobic008G022400 Sobic008G022400 Sobic001G280500 Sobic001G280500 Sobic008G022400--Sobic001G280500 Sobic002G414800 Sobic002G414800 Sobic008G022400--Sobic002G414800 Sobic002G213900 Sobic002G213900 Sobic008G022400--Sobic002G213900 Sobic010G086300 Sobic010G086300 Sobic008G022400--Sobic010G086300 Sobic010G153400 Sobic010G153400 Sobic008G022400--Sobic010G153400 Sobic001G384200 Sobic001G384200 Sobic008G022400--Sobic001G384200 Sobic001G387300 Sobic001G387300 Sobic008G022400--Sobic001G387300 Sobic006G265800 Sobic006G265800 Sobic008G022400--Sobic006G265800 Sobic008G166100 Sobic008G166100 Sobic008G022400--Sobic008G166100 Sobic001G280500--Sobic002G414800 Sobic001G149000 Sobic001G149000 Sobic001G280500--Sobic001G149000 Sobic005G063200 Sobic005G063200 Sobic001G280500--Sobic005G063200 Sobic001G280500--Sobic001G384200 Sobic001G280500--Sobic008G166100 Sobic001G280500--Sobic008G022400 Sobic010G160300 Sobic010G160300 Sobic001G280500--Sobic010G160300 Sobic001G424800 Sobic001G424800 Sobic001G280500--Sobic001G424800 Sobic001G280500--Sobic006G265800 Sobic002G414800--Sobic001G384200 Sobic002G414800--Sobic008G166100 Sobic002G414800--Sobic001G280500 Sobic002G414800--Sobic006G265800 Sobic006G134500 Sobic006G134500 Sobic002G414800--Sobic006G134500 Sobic001G400000 Sobic001G400000 Sobic002G414800--Sobic001G400000 Sobic004G007400 Sobic004G007400 Sobic002G414800--Sobic004G007400 Sobic002G414800--Sobic001G387300 Sobic002G362500 Sobic002G362500 Sobic002G414800--Sobic002G362500 Sobic002G213900--Sobic006G134500 Sobic002G213900--Sobic001G384200 Sobic009G178400 Sobic009G178400 Sobic002G213900--Sobic009G178400 Sobic003G385300 Sobic003G385300 Sobic002G213900--Sobic003G385300 Sobic004G113600 Sobic004G113600 Sobic002G213900--Sobic004G113600 Sobic002G213900--Sobic001G387300 Sobic002G213900--Sobic008G166100 Sobic002G389600 Sobic002G389600 Sobic002G213900--Sobic002G389600 Sobic002G213900--Sobic006G265800 Sobic001G385000 Sobic001G385000 Sobic010G086300--Sobic001G385000 Sobic006G232800 Sobic006G232800 Sobic010G086300--Sobic006G232800 Sobic003G394500 Sobic003G394500 Sobic010G086300--Sobic003G394500 Sobic010G086300--Sobic001G149000 Sobic010G086300--Sobic008G022400 Sobic009G025700 Sobic009G025700 Sobic010G086300--Sobic009G025700 Sobic010G086300--Sobic002G362500 Sobic006G191000 Sobic006G191000 Sobic010G086300--Sobic006G191000 Sobic009G046900 Sobic009G046900 Sobic010G086300--Sobic009G046900 Sobic002G348400 Sobic002G348400 Sobic010G153400--Sobic002G348400 Sobic003G004800 Sobic003G004800 Sobic010G153400--Sobic003G004800 Sobic002G392400 Sobic002G392400 Sobic010G153400--Sobic002G392400 Sobic010G153400--Sobic008G022400 Sobic001G131900 Sobic001G131900 Sobic010G153400--Sobic001G131900 Sobic003G293400 Sobic003G293400 Sobic010G153400--Sobic003G293400 Sobic010G153400--Sobic006G265800 Sobic001G117900 Sobic001G117900 Sobic010G153400--Sobic001G117900 Sobic004G328100 Sobic004G328100 Sobic010G153400--Sobic004G328100 Sobic003G024100 Sobic003G024100 Sobic001G384200--Sobic003G024100 Sobic001G340800 Sobic001G340800 Sobic001G384200--Sobic001G340800 Sobic001G384200--Sobic008G166100 Sobic001G384200--Sobic009G178400 Sobic001G370400 Sobic001G370400 Sobic001G384200--Sobic001G370400 Sobic003G244400 Sobic003G244400 Sobic001G384200--Sobic003G244400 Sobic001G432200 Sobic001G432200 Sobic001G384200--Sobic001G432200 Sobic003G175350 Sobic003G175350 Sobic001G384200--Sobic003G175350 Sobic007G039200 Sobic007G039200 Sobic001G384200--Sobic007G039200 Sobic001G387300--Sobic001G384200 Sobic001G387300--Sobic009G178400 Sobic001G387300--Sobic008G166100 Sobic001G322400 Sobic001G322400 Sobic001G387300--Sobic001G322400 Sobic001G387300--Sobic004G113600 Sobic009G202000 Sobic009G202000 Sobic001G387300--Sobic009G202000 Sobic001G387300--Sobic003G244400 Sobic001G072000 Sobic001G072000 Sobic001G387300--Sobic001G072000 Sobic001G387300--Sobic001G432200 Sobic006G265800--Sobic001G384200 Sobic006G265800--Sobic006G134500 Sobic006G265800--Sobic001G400000 Sobic009G163100 Sobic009G163100 Sobic006G265800--Sobic009G163100 Sobic009G201000 Sobic009G201000 Sobic006G265800--Sobic009G201000 Sobic006G265800--Sobic003G024100 Sobic008G156600 Sobic008G156600 Sobic006G265800--Sobic008G156600 Sobic006G265800--Sobic003G244400 Sobic008G007600 Sobic008G007600 Sobic006G265800--Sobic008G007600 Sobic008G166100--Sobic001G384200 Sobic008G166100--Sobic007G039200 Sobic008G166100--Sobic009G178400 Sobic008G166100--Sobic001G322400 Sobic008G166100--Sobic003G024100 Sobic008G166100--Sobic009G202000 Sobic008G166100--Sobic001G340800 Sobic008G166100--Sobic001G387300 Sobic008G166100--Sobic001G432200
Octagon: transcription factors


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