Gene annotation
Transcriptome id Sobic.010G277700.3,Sobic.010G277700.5,Sobic.010G277700.8,Sobic.010G277700.1,Sobic.010G277700.7,Sobic.010G277700.6,Sobic.010G277700.4
Synonym Sb10g031125, ATIPT9, IPT9
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
IPP transferase, putative, expressed
UniProt A0A194YLX2 , A0A194YLW0
Pfam PF01745
Panther DB PTHR11088 PTHR11088:SF31
NCBI CDD KOG1384; tRNA delta(2)-isopentenylpyrophosphate transferase
KEGG Orthology K00791; miaA, tRNA dimethylallyltransferase
Gene Ontology GO:0009058; biosynthetic process GO:0004161dimethylallyltranstransferase activity


Orthologs (automatic annotation)
TAIR AT5G20040 : isopentenyltransferase 9
RAP-DB (Rice) LOC_Os06g51350.1 : IPP transferase, putative, expressed
MaizeGDB (Corn) Zm00025a041678
Brachypodium PNT75280
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G071362 - K02021: putative ABC transport system ATP-binding protein
2 Sobic.004G194400 expressed protein -
3 Sobic.006G134500 calcium-binding mitochondrial protein anon-60Da, putative, expressed K17800: LETM1, LETM1 and EF-hand domain-containing protein 1, mitochondrial
4 Sobic.010G134650 - -
5 Sobic.009G046900 N-acetylglucosaminyltransferase, putative, expressed -
6 Sobic.008G022400 EMB2748, putative, expressed -
7 Sobic.004G189000 - -
8 Sobic.010G130601 - -
9 Sobic.010G112600 integral membrane protein, putative, expressed -
10 Sobic.006G265800 OsFBX154 - F-box domain containing protein, expressed -
11 Sobic.010G274800 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
12 Sobic.003G358600 similar to Phosphorylase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@alpha-glucan phosphorylast isozyme, putative, expressed K00688: PYG, glycogen phosphorylase
13 Sobic.009G156800 expressed protein -
14 Sobic.006G117700 - -
15 Sobic.002G414800 PPR repeat domain containing protein, putative, expressed -
16 Sobic.003G428000 expressed protein -
17 Sobic.003G385300 Ser/Thr protein phosphatase family protein, putative, expressed -
18 Sobic.002G213900 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
19 Sobic.002G233600 glycogen operon protein glgX, putative, expressed K01214: ISA, isoamylase
20 Sobic.006G162400 expressed protein -


Gene co-expression network
sample Sobic010G277700 Sobic010G277700 Sobic006G071362 Sobic006G071362 Sobic010G277700--Sobic006G071362 Sobic004G194400 Sobic004G194400 Sobic010G277700--Sobic004G194400 Sobic006G134500 Sobic006G134500 Sobic010G277700--Sobic006G134500 Sobic010G134650 Sobic010G134650 Sobic010G277700--Sobic010G134650 Sobic009G046900 Sobic009G046900 Sobic010G277700--Sobic009G046900 Sobic008G022400 Sobic008G022400 Sobic010G277700--Sobic008G022400 Sobic004G189000 Sobic004G189000 Sobic010G277700--Sobic004G189000 Sobic010G130601 Sobic010G130601 Sobic010G277700--Sobic010G130601 Sobic010G112600 Sobic010G112600 Sobic010G277700--Sobic010G112600 Sobic006G071362--Sobic004G194400 Sobic003G358600 Sobic003G358600 Sobic006G071362--Sobic003G358600 Sobic001G340800 Sobic001G340800 Sobic006G071362--Sobic001G340800 Sobic006G071362--Sobic006G134500 Sobic006G117700 Sobic006G117700 Sobic006G071362--Sobic006G117700 Sobic002G233600 Sobic002G233600 Sobic006G071362--Sobic002G233600 Sobic006G071362--Sobic010G134650 Sobic003G024100 Sobic003G024100 Sobic006G071362--Sobic003G024100 Sobic006G265800 Sobic006G265800 Sobic006G071362--Sobic006G265800 Sobic004G194400--Sobic006G071362 Sobic004G194400--Sobic006G134500 Sobic004G194400--Sobic006G265800 Sobic003G428000 Sobic003G428000 Sobic004G194400--Sobic003G428000 Sobic004G194400--Sobic010G277700 Sobic001G308500 Sobic001G308500 Sobic004G194400--Sobic001G308500 Sobic001G149000 Sobic001G149000 Sobic004G194400--Sobic001G149000 Sobic003G385300 Sobic003G385300 Sobic004G194400--Sobic003G385300 Sobic010G274800 Sobic010G274800 Sobic004G194400--Sobic010G274800 Sobic006G134500--Sobic006G265800 Sobic001G384200 Sobic001G384200 Sobic006G134500--Sobic001G384200 Sobic006G134500--Sobic003G024100 Sobic006G134500--Sobic004G194400 Sobic001G400000 Sobic001G400000 Sobic006G134500--Sobic001G400000 Sobic004G113600 Sobic004G113600 Sobic006G134500--Sobic004G113600 Sobic006G134500--Sobic001G340800 Sobic003G175350 Sobic003G175350 Sobic006G134500--Sobic003G175350 Sobic006G134500--Sobic006G071362 Sobic010G134650--Sobic006G071362 Sobic001G257800 Sobic001G257800 Sobic010G134650--Sobic001G257800 Sobic010G134650--Sobic003G385300 Sobic007G039200 Sobic007G039200 Sobic010G134650--Sobic007G039200 Sobic010G134650--Sobic009G046900 Sobic008G159701 Sobic008G159701 Sobic010G134650--Sobic008G159701 Sobic003G236000 Sobic003G236000 Sobic010G134650--Sobic003G236000 Sobic010G134650--Sobic006G117700 Sobic010G202200 Sobic010G202200 Sobic010G134650--Sobic010G202200 Sobic009G046900--Sobic001G149000 Sobic009G178400 Sobic009G178400 Sobic009G046900--Sobic009G178400 Sobic009G046900--Sobic002G233600 Sobic009G046900--Sobic006G134500 Sobic002G074800 Sobic002G074800 Sobic009G046900--Sobic002G074800 Sobic009G046900--Sobic003G385300 Sobic009G046900--Sobic001G384200 Sobic006G193400 Sobic006G193400 Sobic009G046900--Sobic006G193400 Sobic009G046900--Sobic003G358600 Sobic001G280500 Sobic001G280500 Sobic008G022400--Sobic001G280500 Sobic002G414800 Sobic002G414800 Sobic008G022400--Sobic002G414800 Sobic002G213900 Sobic002G213900 Sobic008G022400--Sobic002G213900 Sobic010G086300 Sobic010G086300 Sobic008G022400--Sobic010G086300 Sobic010G153400 Sobic010G153400 Sobic008G022400--Sobic010G153400 Sobic008G022400--Sobic001G384200 Sobic001G387300 Sobic001G387300 Sobic008G022400--Sobic001G387300 Sobic008G022400--Sobic006G265800 Sobic008G166100 Sobic008G166100 Sobic008G022400--Sobic008G166100 Sobic004G189000--Sobic006G117700 Sobic004G189000--Sobic006G071362 Sobic003G156900 Sobic003G156900 Sobic004G189000--Sobic003G156900 Sobic009G061500 Sobic009G061500 Sobic004G189000--Sobic009G061500 Sobic004G140400 Sobic004G140400 Sobic004G189000--Sobic004G140400 Sobic006G093600 Sobic006G093600 Sobic004G189000--Sobic006G093600 Sobic004G189000--Sobic001G340800 Sobic001G232600 Sobic001G232600 Sobic004G189000--Sobic001G232600 Sobic004G189000--Sobic010G130601 Sobic010G124900 Sobic010G124900 Sobic010G130601--Sobic010G124900 Sobic010G130601--Sobic006G117700 Sobic001G405100 Sobic001G405100 Sobic010G130601--Sobic001G405100 Sobic002G111100 Sobic002G111100 Sobic010G130601--Sobic002G111100 Sobic001G167600 Sobic001G167600 Sobic010G130601--Sobic001G167600 Sobic006G177700 Sobic006G177700 Sobic010G130601--Sobic006G177700 Sobic010G130601--Sobic003G024100 Sobic008G136601 Sobic008G136601 Sobic010G130601--Sobic008G136601 Sobic006G001100 Sobic006G001100 Sobic010G130601--Sobic006G001100 Sobic005G123400 Sobic005G123400 Sobic010G112600--Sobic005G123400 Sobic003G117800 Sobic003G117800 Sobic010G112600--Sobic003G117800 Sobic010G112600--Sobic004G194400 Sobic010G112600--Sobic010G277700 Sobic003G190200 Sobic003G190200 Sobic010G112600--Sobic003G190200 Sobic009G252300 Sobic009G252300 Sobic010G112600--Sobic009G252300 Sobic003G394500 Sobic003G394500 Sobic010G112600--Sobic003G394500 Sobic006G237500 Sobic006G237500 Sobic010G112600--Sobic006G237500 Sobic008G155400 Sobic008G155400 Sobic010G112600--Sobic008G155400
Octagon: transcription factors


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