Gene annotation
Transcriptome id Sobic.006G071362.1
Synonym -
Functional annotation -
UniProt C6JS57 , A0A1Z5RCM6 , A0A109NDC5
Pfam PF00664 PF00005
Panther DB PTHR24221 PTHR24221:SF112
NCBI CDD KOG0057; Mitochondrial Fe/S cluster exporter, ABC superfamily
KEGG Orthology K02021; putative ABC transport system ATP-binding protein
Gene Ontology GO:0016021; integral component of membrane GO:0006810transport GO:0005524ATP binding GO:0016887ATPase activity


Orthologs (automatic annotation)
TAIR AT5G03910 : ABC2 homolog 12
RAP-DB (Rice) LOC_Os04g33700.1 : ABC transmembrane transporter domain containing protein, expressed
MaizeGDB (Corn) Zm00025a011508
Brachypodium PNT61034 , PNT61035 , PNT61032 , PNT61033
Barley HORVU2Hr1G073100.7 , HORVU2Hr1G073100.6 , HORVU2Hr1G073100.5 , HORVU2Hr1G073100.4 , HORVU2Hr1G073100.3 , HORVU2Hr1G073100.2 , HORVU2Hr1G073100.9 , HORVU2Hr1G073100.8 , HORVU2Hr1G073100.17 , HORVU2Hr1G073100.16 , HORVU2Hr1G073100.15 , HORVU2Hr1G073100.14 , HORVU2Hr1G073100.13 , HORVU2Hr1G073100.12 , HORVU2Hr1G073100.11 , HORVU2Hr1G073100.10
Wheat TraesCS2A02G295200 , TraesCS2B02G311700 , TraesCS2B02G311700 , TraesCS2B02G311700 , TraesCS2B02G311700 , TraesCS2D02G293000 , TraesCS2D02G293000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G194400 expressed protein -
2 Sobic.003G358600 similar to Phosphorylase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@alpha-glucan phosphorylast isozyme, putative, expressed K00688: PYG, glycogen phosphorylase
3 Sobic.001G340800 exocyst complex component 6, putative, expressed -
4 Sobic.006G134500 calcium-binding mitochondrial protein anon-60Da, putative, expressed K17800: LETM1, LETM1 and EF-hand domain-containing protein 1, mitochondrial
5 Sobic.006G117700 - -
6 Sobic.002G233600 glycogen operon protein glgX, putative, expressed K01214: ISA, isoamylase
7 Sobic.010G134650 - -
8 Sobic.003G024100 MRH1, putative, expressed -
9 Sobic.006G265800 OsFBX154 - F-box domain containing protein, expressed -
10 Sobic.003G175350 - -
11 Sobic.010G202200 - -
12 Sobic.007G039200 MYB family transcription factor, putative, expressed -
13 Sobic.006G001100 ELMO/CED-12 family protein, putative, expressed -
14 Sobic.008G071800 - -
15 Sobic.009G178400 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
16 Sobic.008G136601 - -
17 Sobic.001G384200 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
18 Sobic.008G159701 - -
19 Sobic.010G277700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IPP transferase, putative, expressed K00791: miaA, tRNA dimethylallyltransferase
20 Sobic.009G061500 - -


Gene co-expression network
sample Sobic006G071362 Sobic006G071362 Sobic004G194400 Sobic004G194400 Sobic006G071362--Sobic004G194400 Sobic003G358600 Sobic003G358600 Sobic006G071362--Sobic003G358600 Sobic001G340800 Sobic001G340800 Sobic006G071362--Sobic001G340800 Sobic006G134500 Sobic006G134500 Sobic006G071362--Sobic006G134500 Sobic006G117700 Sobic006G117700 Sobic006G071362--Sobic006G117700 Sobic002G233600 Sobic002G233600 Sobic006G071362--Sobic002G233600 Sobic010G134650 Sobic010G134650 Sobic006G071362--Sobic010G134650 Sobic003G024100 Sobic003G024100 Sobic006G071362--Sobic003G024100 Sobic006G265800 Sobic006G265800 Sobic006G071362--Sobic006G265800 Sobic004G194400--Sobic006G071362 Sobic004G194400--Sobic006G134500 Sobic004G194400--Sobic006G265800 Sobic003G428000 Sobic003G428000 Sobic004G194400--Sobic003G428000 Sobic010G277700 Sobic010G277700 Sobic004G194400--Sobic010G277700 Sobic001G308500 Sobic001G308500 Sobic004G194400--Sobic001G308500 Sobic001G149000 Sobic001G149000 Sobic004G194400--Sobic001G149000 Sobic003G385300 Sobic003G385300 Sobic004G194400--Sobic003G385300 Sobic010G274800 Sobic010G274800 Sobic004G194400--Sobic010G274800 Sobic001G308000 Sobic001G308000 Sobic003G358600--Sobic001G308000 Sobic006G193400 Sobic006G193400 Sobic003G358600--Sobic006G193400 Sobic009G178400 Sobic009G178400 Sobic003G358600--Sobic009G178400 Sobic009G238650 Sobic009G238650 Sobic003G358600--Sobic009G238650 Sobic007G048101 Sobic007G048101 Sobic003G358600--Sobic007G048101 Sobic006G204400 Sobic006G204400 Sobic003G358600--Sobic006G204400 Sobic002G088600 Sobic002G088600 Sobic003G358600--Sobic002G088600 Sobic003G358600--Sobic001G340800 Sobic003G244400 Sobic003G244400 Sobic003G358600--Sobic003G244400 Sobic001G370400 Sobic001G370400 Sobic001G340800--Sobic001G370400 Sobic009G061601 Sobic009G061601 Sobic001G340800--Sobic009G061601 Sobic008G136601 Sobic008G136601 Sobic001G340800--Sobic008G136601 Sobic004G290600 Sobic004G290600 Sobic001G340800--Sobic004G290600 Sobic009G061500 Sobic009G061500 Sobic001G340800--Sobic009G061500 Sobic008G020800 Sobic008G020800 Sobic001G340800--Sobic008G020800 Sobic001G294500 Sobic001G294500 Sobic001G340800--Sobic001G294500 Sobic007G131000 Sobic007G131000 Sobic001G340800--Sobic007G131000 Sobic003G093100 Sobic003G093100 Sobic001G340800--Sobic003G093100 Sobic006G134500--Sobic006G265800 Sobic001G384200 Sobic001G384200 Sobic006G134500--Sobic001G384200 Sobic006G134500--Sobic003G024100 Sobic006G134500--Sobic004G194400 Sobic001G400000 Sobic001G400000 Sobic006G134500--Sobic001G400000 Sobic004G113600 Sobic004G113600 Sobic006G134500--Sobic004G113600 Sobic006G134500--Sobic001G340800 Sobic003G175350 Sobic003G175350 Sobic006G134500--Sobic003G175350 Sobic006G134500--Sobic006G071362 Sobic004G082800 Sobic004G082800 Sobic006G117700--Sobic004G082800 Sobic010G202200 Sobic010G202200 Sobic006G117700--Sobic010G202200 Sobic001G405100 Sobic001G405100 Sobic006G117700--Sobic001G405100 Sobic003G156900 Sobic003G156900 Sobic006G117700--Sobic003G156900 Sobic006G027601 Sobic006G027601 Sobic006G117700--Sobic006G027601 Sobic005G110424 Sobic005G110424 Sobic006G117700--Sobic005G110424 Sobic006G001100 Sobic006G001100 Sobic006G117700--Sobic006G001100 Sobic006G117700--Sobic001G340800 Sobic006G117700--Sobic009G061500 Sobic002G233600--Sobic009G178400 Sobic002G233600--Sobic001G308000 Sobic009G230800 Sobic009G230800 Sobic002G233600--Sobic009G230800 Sobic007G039200 Sobic007G039200 Sobic002G233600--Sobic007G039200 Sobic002G233600--Sobic007G048101 Sobic002G233600--Sobic009G238650 Sobic002G233600--Sobic001G340800 Sobic002G233600--Sobic006G001100 Sobic002G233600--Sobic003G358600 Sobic010G134650--Sobic006G071362 Sobic001G257800 Sobic001G257800 Sobic010G134650--Sobic001G257800 Sobic010G134650--Sobic003G385300 Sobic010G134650--Sobic007G039200 Sobic009G046900 Sobic009G046900 Sobic010G134650--Sobic009G046900 Sobic008G159701 Sobic008G159701 Sobic010G134650--Sobic008G159701 Sobic003G236000 Sobic003G236000 Sobic010G134650--Sobic003G236000 Sobic010G134650--Sobic006G117700 Sobic010G134650--Sobic010G202200 Sobic003G024100--Sobic001G340800 Sobic003G024100--Sobic001G384200 Sobic003G024100--Sobic001G370400 Sobic003G024100--Sobic009G061500 Sobic003G024100--Sobic008G136601 Sobic003G024100--Sobic006G001100 Sobic007G091400 Sobic007G091400 Sobic003G024100--Sobic007G091400 Sobic010G003200 Sobic010G003200 Sobic003G024100--Sobic010G003200 Sobic003G024100--Sobic009G061601 Sobic006G265800--Sobic001G384200 Sobic006G265800--Sobic006G134500 Sobic006G265800--Sobic001G400000 Sobic009G163100 Sobic009G163100 Sobic006G265800--Sobic009G163100 Sobic009G201000 Sobic009G201000 Sobic006G265800--Sobic009G201000 Sobic006G265800--Sobic003G024100 Sobic008G156600 Sobic008G156600 Sobic006G265800--Sobic008G156600 Sobic006G265800--Sobic003G244400 Sobic008G007600 Sobic008G007600 Sobic006G265800--Sobic008G007600
Octagon: transcription factors


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