Gene annotation
Transcriptome id Sobic.004G194400.1
Synonym Sb04g024190
Functional annotation expressed protein
UniProt C5XWB7
Pfam PF01535 PF13041
Panther DB PTHR24015 PTHR24015:SF408
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G65560 : Pentatricopeptide repeat (PPR) superfamily protein
RAP-DB (Rice) LOC_Os02g37140.2 : expressed protein
MaizeGDB (Corn) Zm00025a031771
Brachypodium PNT68927
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G071362 - K02021: putative ABC transport system ATP-binding protein
2 Sobic.006G134500 calcium-binding mitochondrial protein anon-60Da, putative, expressed K17800: LETM1, LETM1 and EF-hand domain-containing protein 1, mitochondrial
3 Sobic.006G265800 OsFBX154 - F-box domain containing protein, expressed -
4 Sobic.003G428000 expressed protein -
5 Sobic.010G277700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IPP transferase, putative, expressed K00791: miaA, tRNA dimethylallyltransferase
6 Sobic.001G308500 glycosyltransferase family protein 1, putative, expressed -
7 Sobic.001G149000 FAR1 family protein, expressed -
8 Sobic.003G385300 Ser/Thr protein phosphatase family protein, putative, expressed -
9 Sobic.010G274800 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
10 Sobic.009G046900 N-acetylglucosaminyltransferase, putative, expressed -
11 Sobic.006G162400 expressed protein -
12 Sobic.008G095900 ATP binding protein, putative, expressed K17592: sacsin
13 Sobic.004G189000 - -
14 Sobic.002G213900 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
15 Sobic.010G134650 - -
16 Sobic.006G191000 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
17 Sobic.001G384200 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
18 Sobic.001G356200 nucleoside-triphosphatase, putative, expressed K01510: ENTPD1_3_8, apyrase
19 Sobic.009G156800 expressed protein -
20 Sobic.006G117700 - -


Gene co-expression network
sample Sobic004G194400 Sobic004G194400 Sobic006G071362 Sobic006G071362 Sobic004G194400--Sobic006G071362 Sobic006G134500 Sobic006G134500 Sobic004G194400--Sobic006G134500 Sobic006G265800 Sobic006G265800 Sobic004G194400--Sobic006G265800 Sobic003G428000 Sobic003G428000 Sobic004G194400--Sobic003G428000 Sobic010G277700 Sobic010G277700 Sobic004G194400--Sobic010G277700 Sobic001G308500 Sobic001G308500 Sobic004G194400--Sobic001G308500 Sobic001G149000 Sobic001G149000 Sobic004G194400--Sobic001G149000 Sobic003G385300 Sobic003G385300 Sobic004G194400--Sobic003G385300 Sobic010G274800 Sobic010G274800 Sobic004G194400--Sobic010G274800 Sobic006G071362--Sobic004G194400 Sobic003G358600 Sobic003G358600 Sobic006G071362--Sobic003G358600 Sobic001G340800 Sobic001G340800 Sobic006G071362--Sobic001G340800 Sobic006G071362--Sobic006G134500 Sobic006G117700 Sobic006G117700 Sobic006G071362--Sobic006G117700 Sobic002G233600 Sobic002G233600 Sobic006G071362--Sobic002G233600 Sobic010G134650 Sobic010G134650 Sobic006G071362--Sobic010G134650 Sobic003G024100 Sobic003G024100 Sobic006G071362--Sobic003G024100 Sobic006G071362--Sobic006G265800 Sobic006G134500--Sobic006G265800 Sobic001G384200 Sobic001G384200 Sobic006G134500--Sobic001G384200 Sobic006G134500--Sobic003G024100 Sobic006G134500--Sobic004G194400 Sobic001G400000 Sobic001G400000 Sobic006G134500--Sobic001G400000 Sobic004G113600 Sobic004G113600 Sobic006G134500--Sobic004G113600 Sobic006G134500--Sobic001G340800 Sobic003G175350 Sobic003G175350 Sobic006G134500--Sobic003G175350 Sobic006G134500--Sobic006G071362 Sobic006G265800--Sobic001G384200 Sobic006G265800--Sobic006G134500 Sobic006G265800--Sobic001G400000 Sobic009G163100 Sobic009G163100 Sobic006G265800--Sobic009G163100 Sobic009G201000 Sobic009G201000 Sobic006G265800--Sobic009G201000 Sobic006G265800--Sobic003G024100 Sobic008G156600 Sobic008G156600 Sobic006G265800--Sobic008G156600 Sobic003G244400 Sobic003G244400 Sobic006G265800--Sobic003G244400 Sobic008G007600 Sobic008G007600 Sobic006G265800--Sobic008G007600 Sobic003G428000--Sobic001G149000 Sobic009G046900 Sobic009G046900 Sobic003G428000--Sobic009G046900 Sobic003G428000--Sobic004G194400 Sobic008G152700 Sobic008G152700 Sobic003G428000--Sobic008G152700 Sobic003G428000--Sobic010G274800 Sobic009G252300 Sobic009G252300 Sobic003G428000--Sobic009G252300 Sobic003G428000--Sobic003G385300 Sobic004G082800 Sobic004G082800 Sobic003G428000--Sobic004G082800 Sobic002G074800 Sobic002G074800 Sobic003G428000--Sobic002G074800 Sobic010G277700--Sobic006G071362 Sobic010G277700--Sobic004G194400 Sobic010G277700--Sobic006G134500 Sobic010G277700--Sobic010G134650 Sobic010G277700--Sobic009G046900 Sobic008G022400 Sobic008G022400 Sobic010G277700--Sobic008G022400 Sobic004G189000 Sobic004G189000 Sobic010G277700--Sobic004G189000 Sobic010G130601 Sobic010G130601 Sobic010G277700--Sobic010G130601 Sobic010G112600 Sobic010G112600 Sobic010G277700--Sobic010G112600 Sobic001G308500--Sobic006G265800 Sobic008G085950 Sobic008G085950 Sobic001G308500--Sobic008G085950 Sobic001G385300 Sobic001G385300 Sobic001G308500--Sobic001G385300 Sobic001G308500--Sobic009G201000 Sobic003G352900 Sobic003G352900 Sobic001G308500--Sobic003G352900 Sobic001G308500--Sobic010G274800 Sobic001G308500--Sobic009G163100 Sobic004G298600 Sobic004G298600 Sobic001G308500--Sobic004G298600 Sobic008G166100 Sobic008G166100 Sobic001G308500--Sobic008G166100 Sobic004G077300 Sobic004G077300 Sobic001G149000--Sobic004G077300 Sobic001G149000--Sobic008G152700 Sobic001G149000--Sobic003G385300 Sobic001G149000--Sobic009G046900 Sobic001G149000--Sobic001G384200 Sobic009G178400 Sobic009G178400 Sobic001G149000--Sobic009G178400 Sobic001G280500 Sobic001G280500 Sobic001G149000--Sobic001G280500 Sobic001G149000--Sobic008G166100 Sobic001G387300 Sobic001G387300 Sobic001G149000--Sobic001G387300 Sobic003G385300--Sobic001G149000 Sobic003G402800 Sobic003G402800 Sobic003G385300--Sobic003G402800 Sobic003G385300--Sobic004G077300 Sobic004G064200 Sobic004G064200 Sobic003G385300--Sobic004G064200 Sobic004G176200 Sobic004G176200 Sobic003G385300--Sobic004G176200 Sobic001G257800 Sobic001G257800 Sobic003G385300--Sobic001G257800 Sobic005G225500 Sobic005G225500 Sobic003G385300--Sobic005G225500 Sobic007G039200 Sobic007G039200 Sobic003G385300--Sobic007G039200 Sobic003G385300--Sobic002G074800 Sobic010G274800--Sobic001G308500 Sobic010G274800--Sobic009G046900 Sobic010G274800--Sobic001G149000 Sobic010G274800--Sobic003G428000 Sobic010G274800--Sobic004G194400 Sobic010G274800--Sobic006G265800 Sobic010G274800--Sobic006G071362 Sobic010G086300 Sobic010G086300 Sobic010G274800--Sobic010G086300 Sobic010G274800--Sobic006G134500
Octagon: transcription factors


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