Gene annotation
Transcriptome id Sobic.003G358600.1
Synonym ATPHS2, Sb03g040060, PHS2,
Functional annotation similar to Phosphorylase (PubMedID : 29862293)
SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
alpha-glucan phosphorylast isozyme, putative, expressed
UniProt C5XPV2
Pfam PF00343
Panther DB PTHR11468 PTHR11468:SF4
NCBI CDD -
KEGG Orthology K00688; PYG, glycogen phosphorylase
Gene Ontology GO:0008184; glycogen phosphorylase activity GO:0005975carbohydrate metabolic process


Orthologs (automatic annotation)
TAIR AT3G46970 : alpha-glucan phosphorylase 2
RAP-DB (Rice) LOC_Os01g63270.1 : alpha-glucan phosphorylast isozyme, putative, expressed
MaizeGDB (Corn) Zm00025a026830
Brachypodium KQK10602
Barley HORVU6Hr1G086020.2 , HORVU6Hr1G086020.3 , HORVU6Hr1G086020.4 , HORVU6Hr1G086020.5 , HORVU6Hr1G086020.6 , HORVU6Hr1G086020.7 , HORVU6Hr1G086020.8 , HORVU6Hr1G086020.9 , HORVU6Hr1G086020.23 , HORVU6Hr1G086020.22 , HORVU6Hr1G086020.21 , HORVU6Hr1G086020.20 , HORVU6Hr1G086020.27 , HORVU6Hr1G086020.26 , HORVU6Hr1G086020.25 , HORVU6Hr1G086020.24 , HORVU6Hr1G086020.29 , HORVU6Hr1G086020.28 , HORVU6Hr1G086020.30 , HORVU6Hr1G086020.31 , HORVU6Hr1G086020.32 , HORVU6Hr1G086020.33 , HORVU6Hr1G086020.34 , HORVU6Hr1G086020.35 , HORVU6Hr1G086020.36 , HORVU6Hr1G086020.37 , HORVU6Hr1G086020.38 , HORVU2Hr1G012630.5 , HORVU2Hr1G012630.6 , HORVU2Hr1G012630.1 , HORVU2Hr1G012630.2 , HORVU2Hr1G012630.3 , HORVU2Hr1G012630.4 , HORVU6Hr1G086020.39 , HORVU6Hr1G085990.1 , HORVU3Hr1G085390.1 , HORVU6Hr1G086020.18 , HORVU6Hr1G086020.19 , HORVU6Hr1G086020.12 , HORVU6Hr1G086020.13 , HORVU6Hr1G086020.10 , HORVU6Hr1G086020.11 , HORVU6Hr1G086020.16 , HORVU6Hr1G086020.17 , HORVU6Hr1G086020.14 , HORVU6Hr1G086020.15 , HORVU3Hr1G085420.8 , HORVU3Hr1G085420.9 , HORVU3Hr1G085420.4 , HORVU3Hr1G085420.5 , HORVU3Hr1G085420.6 , HORVU3Hr1G085420.7 , HORVU3Hr1G085420.1 , HORVU3Hr1G085420.2 , HORVU3Hr1G085420.3 , HORVU3Hr1G085380.11 , HORVU3Hr1G085380.10 , HORVU3Hr1G085380.12 , HORVU6Hr1G085990.2 , HORVU3Hr1G085420.12 , HORVU3Hr1G085420.13 , HORVU3Hr1G085420.10 , HORVU3Hr1G085420.11 , HORVU3Hr1G085410.1 , HORVU3Hr1G085410.3 , HORVU3Hr1G085410.2 , HORVU3Hr1G085380.1 , HORVU3Hr1G085380.3 , HORVU3Hr1G085380.2 , HORVU3Hr1G085380.5 , HORVU3Hr1G085380.4 , HORVU3Hr1G085380.7 , HORVU3Hr1G085380.6 , HORVU3Hr1G085380.9 , HORVU3Hr1G085380.8 , HORVU6Hr1G086020.41 , HORVU6Hr1G086020.40 , HORVU6Hr1G086020.43 , HORVU6Hr1G086020.42 , HORVU6Hr1G086020.45 , HORVU6Hr1G086020.44 , HORVU6Hr1G086020.47 , HORVU6Hr1G086020.46 , HORVU6Hr1G086020.49 , HORVU6Hr1G086020.48 , HORVU6Hr1G086020.54 , HORVU6Hr1G086020.55 , HORVU6Hr1G086020.52 , HORVU6Hr1G086020.53 , HORVU6Hr1G086020.50 , HORVU6Hr1G086020.51
Wheat TraesCS3A02G366400 , TraesCS3D02G359200 , TraesCS3B02G397900 , TraesCS3D02G359300 , TraesCS3B02G398000 , TraesCS3A02G366300
Populus -


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cDNA sequences
Sobic.003G358600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G308000 viral A-type inclusion protein repeat containing protein, expressed -
2 Sobic.006G193400 regulatory protein, putative, expressed -
3 Sobic.009G178400 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
4 Sobic.009G238650 - -
5 Sobic.007G048101 - -
6 Sobic.006G204400 maltose excess protein 1-like, chloroplast precursor, putative, expressed -
7 Sobic.002G088600 glucose-1-phosphate adenylyltransferase large subunit, putative, expressed K00975: glucose-1-phosphate adenylyltransferase
8 Sobic.001G340800 exocyst complex component 6, putative, expressed -
9 Sobic.003G244400 OsFBK1 - F-box domain and kelch repeat containing protein, expressed -
10 Sobic.002G233600 glycogen operon protein glgX, putative, expressed K01214: ISA, isoamylase
11 Sobic.003G093100 cyclin-related protein, putative, expressed -
12 Sobic.004G177900 - -
13 Sobic.003G407700 dnaJ domain containing protein, expressed -
14 Sobic.010G073900 expressed protein -
15 Sobic.006G239500 plant protein of unknown function domain containing protein, expressed -
16 Sobic.004G328500 expressed protein -
17 Sobic.002G372000 - -
18 Sobic.006G177700 uncharacterized mscS family protein, putative, expressed -
19 Sobic.001G294500 phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplast precursor, putative, expressed K01626: E2.5.1.54, aroF, aroG, 3-deoxy-7-phosphoheptulonate synthase
20 Sobic.001G370400 aberrant pollen transmission 1, putative, expressed -


Gene co-expression network
sample Sobic003G358600 Sobic003G358600 Sobic001G308000 Sobic001G308000 Sobic003G358600--Sobic001G308000 Sobic006G193400 Sobic006G193400 Sobic003G358600--Sobic006G193400 Sobic009G178400 Sobic009G178400 Sobic003G358600--Sobic009G178400 Sobic009G238650 Sobic009G238650 Sobic003G358600--Sobic009G238650 Sobic007G048101 Sobic007G048101 Sobic003G358600--Sobic007G048101 Sobic006G204400 Sobic006G204400 Sobic003G358600--Sobic006G204400 Sobic002G088600 Sobic002G088600 Sobic003G358600--Sobic002G088600 Sobic001G340800 Sobic001G340800 Sobic003G358600--Sobic001G340800 Sobic003G244400 Sobic003G244400 Sobic003G358600--Sobic003G244400 Sobic005G120400 Sobic005G120400 Sobic001G308000--Sobic005G120400 Sobic010G177500 Sobic010G177500 Sobic001G308000--Sobic010G177500 Sobic005G092100 Sobic005G092100 Sobic001G308000--Sobic005G092100 Sobic004G349600 Sobic004G349600 Sobic001G308000--Sobic004G349600 Sobic001G308000--Sobic009G238650 Sobic003G191350 Sobic003G191350 Sobic001G308000--Sobic003G191350 Sobic001G308000--Sobic002G088600 Sobic002G372000 Sobic002G372000 Sobic001G308000--Sobic002G372000 Sobic001G165901 Sobic001G165901 Sobic001G308000--Sobic001G165901 Sobic006G193400--Sobic006G204400 Sobic007G212500 Sobic007G212500 Sobic006G193400--Sobic007G212500 Sobic006G193400--Sobic003G358600 Sobic006G193400--Sobic003G244400 Sobic006G193400--Sobic001G340800 Sobic001G370400 Sobic001G370400 Sobic006G193400--Sobic001G370400 Sobic009G148600 Sobic009G148600 Sobic006G193400--Sobic009G148600 Sobic006G204500 Sobic006G204500 Sobic006G193400--Sobic006G204500 Sobic001G432200 Sobic001G432200 Sobic006G193400--Sobic001G432200 Sobic001G384200 Sobic001G384200 Sobic009G178400--Sobic001G384200 Sobic009G178400--Sobic001G340800 Sobic002G233600 Sobic002G233600 Sobic009G178400--Sobic002G233600 Sobic008G166100 Sobic008G166100 Sobic009G178400--Sobic008G166100 Sobic007G039200 Sobic007G039200 Sobic009G178400--Sobic007G039200 Sobic009G178400--Sobic007G048101 Sobic009G178400--Sobic001G432200 Sobic009G178400--Sobic001G308000 Sobic009G178400--Sobic002G088600 Sobic006G239500 Sobic006G239500 Sobic009G238650--Sobic006G239500 Sobic009G238650--Sobic004G349600 Sobic002G199800 Sobic002G199800 Sobic009G238650--Sobic002G199800 Sobic010G073900 Sobic010G073900 Sobic009G238650--Sobic010G073900 Sobic009G238650--Sobic002G088600 Sobic010G128350 Sobic010G128350 Sobic009G238650--Sobic010G128350 Sobic009G238650--Sobic005G120400 Sobic003G407700 Sobic003G407700 Sobic009G238650--Sobic003G407700 Sobic009G238650--Sobic007G048101 Sobic007G048101--Sobic009G238650 Sobic007G048101--Sobic002G088600 Sobic003G093100 Sobic003G093100 Sobic007G048101--Sobic003G093100 Sobic004G177900 Sobic004G177900 Sobic007G048101--Sobic004G177900 Sobic007G048101--Sobic006G239500 Sobic007G048101--Sobic004G349600 Sobic008G025400 Sobic008G025400 Sobic007G048101--Sobic008G025400 Sobic007G048101--Sobic010G073900 Sobic001G294500 Sobic001G294500 Sobic007G048101--Sobic001G294500 Sobic001G106800 Sobic001G106800 Sobic006G204400--Sobic001G106800 Sobic006G001100 Sobic006G001100 Sobic006G204400--Sobic006G001100 Sobic007G176900 Sobic007G176900 Sobic006G204400--Sobic007G176900 Sobic008G136601 Sobic008G136601 Sobic006G204400--Sobic008G136601 Sobic006G097400 Sobic006G097400 Sobic006G204400--Sobic006G097400 Sobic002G111100 Sobic002G111100 Sobic006G204400--Sobic002G111100 Sobic001G163666 Sobic001G163666 Sobic006G204400--Sobic001G163666 Sobic008G103250 Sobic008G103250 Sobic006G204400--Sobic008G103250 Sobic001G241401 Sobic001G241401 Sobic006G204400--Sobic001G241401 Sobic002G088600--Sobic004G177900 Sobic002G088600--Sobic003G093100 Sobic002G088600--Sobic001G294500 Sobic002G088600--Sobic008G025400 Sobic003G151400 Sobic003G151400 Sobic002G088600--Sobic003G151400 Sobic004G328500 Sobic004G328500 Sobic002G088600--Sobic004G328500 Sobic007G131000 Sobic007G131000 Sobic002G088600--Sobic007G131000 Sobic009G061601 Sobic009G061601 Sobic002G088600--Sobic009G061601 Sobic005G043300 Sobic005G043300 Sobic002G088600--Sobic005G043300 Sobic001G340800--Sobic001G370400 Sobic001G340800--Sobic009G061601 Sobic001G340800--Sobic008G136601 Sobic004G290600 Sobic004G290600 Sobic001G340800--Sobic004G290600 Sobic009G061500 Sobic009G061500 Sobic001G340800--Sobic009G061500 Sobic008G020800 Sobic008G020800 Sobic001G340800--Sobic008G020800 Sobic001G340800--Sobic001G294500 Sobic001G340800--Sobic007G131000 Sobic001G340800--Sobic003G093100 Sobic003G244400--Sobic001G370400 Sobic001G103100 Sobic001G103100 Sobic003G244400--Sobic001G103100 Sobic008G055200 Sobic008G055200 Sobic003G244400--Sobic008G055200 Sobic003G244400--Sobic001G432200 Sobic003G244400--Sobic006G204500 Sobic003G244400--Sobic001G340800 Sobic002G364700 Sobic002G364700 Sobic003G244400--Sobic002G364700 Sobic007G091400 Sobic007G091400 Sobic003G244400--Sobic007G091400 Sobic010G003200 Sobic010G003200 Sobic003G244400--Sobic010G003200
Octagon: transcription factors


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