Gene annotation
Transcriptome id Sobic.006G193400.2
Synonym Sb06g026610
Functional annotation regulatory protein, putative, expressed
UniProt A0A1Z5REQ4
Pfam PF03407
Panther DB PTHR24015 PTHR24015:SF684
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G14590 : Nucleotide-diphospho-sugar transferase family protein
RAP-DB (Rice) LOC_Os04g49590.1 : regulatory protein, putative, expressed
MaizeGDB (Corn) Zm00025a010051
Brachypodium PNT61724 , PNT61723
Barley -
Wheat TraesCS2A02G455000 , TraesCS2A02G455000 , TraesCS2B02G477100 , TraesCS2B02G477100 , TraesCS2D02G455400
Populus -


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cDNA sequences
Sobic.006G193400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G204400 maltose excess protein 1-like, chloroplast precursor, putative, expressed -
2 Sobic.007G212500 nodulation protein-related, putative, expressed -
3 Sobic.003G358600 similar to Phosphorylase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@alpha-glucan phosphorylast isozyme, putative, expressed K00688: PYG, glycogen phosphorylase
4 Sobic.003G244400 OsFBK1 - F-box domain and kelch repeat containing protein, expressed -
5 Sobic.001G340800 exocyst complex component 6, putative, expressed -
6 Sobic.001G370400 aberrant pollen transmission 1, putative, expressed -
7 Sobic.009G148600 DUF803 domain containing, putative, expressed -
8 Sobic.006G204500 pectinacetylesterase domain containing protein, expressed -
9 Sobic.001G432200 pleckstrin homology domain-containing protein-related taxo, putative, expressed -
10 Sobic.009G178400 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
11 Sobic.002G364700 ZOS7-11 - C2H2 zinc finger protein, expressed -
12 Sobic.008G029800 expressed protein -
13 Sobic.001G308000 viral A-type inclusion protein repeat containing protein, expressed -
14 Sobic.008G055200 dirigent, putative, expressed -
15 Sobic.004G328500 expressed protein -
16 Sobic.009G061601 - -
17 Sobic.008G071800 - -
18 Sobic.006G143900 transporter family protein, putative, expressed K08150: SLC2A13, MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13
19 Sobic.009G229400 60S acidic ribosomal protein P0, putative, expressed K02941: RP-LP0, large subunit ribosomal protein LP0
20 Sobic.001G194800 TATA-binding protein, putative, expressed K03120: TBP, transcription initiation factor TFIID TATA-box-binding protein


Gene co-expression network
sample Sobic006G193400 Sobic006G193400 Sobic006G204400 Sobic006G204400 Sobic006G193400--Sobic006G204400 Sobic007G212500 Sobic007G212500 Sobic006G193400--Sobic007G212500 Sobic003G358600 Sobic003G358600 Sobic006G193400--Sobic003G358600 Sobic003G244400 Sobic003G244400 Sobic006G193400--Sobic003G244400 Sobic001G340800 Sobic001G340800 Sobic006G193400--Sobic001G340800 Sobic001G370400 Sobic001G370400 Sobic006G193400--Sobic001G370400 Sobic009G148600 Sobic009G148600 Sobic006G193400--Sobic009G148600 Sobic006G204500 Sobic006G204500 Sobic006G193400--Sobic006G204500 Sobic001G432200 Sobic001G432200 Sobic006G193400--Sobic001G432200 Sobic001G106800 Sobic001G106800 Sobic006G204400--Sobic001G106800 Sobic006G001100 Sobic006G001100 Sobic006G204400--Sobic006G001100 Sobic007G176900 Sobic007G176900 Sobic006G204400--Sobic007G176900 Sobic008G136601 Sobic008G136601 Sobic006G204400--Sobic008G136601 Sobic006G097400 Sobic006G097400 Sobic006G204400--Sobic006G097400 Sobic002G111100 Sobic002G111100 Sobic006G204400--Sobic002G111100 Sobic001G163666 Sobic001G163666 Sobic006G204400--Sobic001G163666 Sobic008G103250 Sobic008G103250 Sobic006G204400--Sobic008G103250 Sobic001G241401 Sobic001G241401 Sobic006G204400--Sobic001G241401 Sobic007G212500--Sobic003G244400 Sobic007G212500--Sobic001G370400 Sobic010G003200 Sobic010G003200 Sobic007G212500--Sobic010G003200 Sobic007G212500--Sobic001G432200 Sobic009G061601 Sobic009G061601 Sobic007G212500--Sobic009G061601 Sobic007G212500--Sobic006G204500 Sobic003G093100 Sobic003G093100 Sobic007G212500--Sobic003G093100 Sobic007G212500--Sobic001G340800 Sobic002G364700 Sobic002G364700 Sobic007G212500--Sobic002G364700 Sobic001G308000 Sobic001G308000 Sobic003G358600--Sobic001G308000 Sobic003G358600--Sobic006G193400 Sobic009G178400 Sobic009G178400 Sobic003G358600--Sobic009G178400 Sobic009G238650 Sobic009G238650 Sobic003G358600--Sobic009G238650 Sobic007G048101 Sobic007G048101 Sobic003G358600--Sobic007G048101 Sobic003G358600--Sobic006G204400 Sobic002G088600 Sobic002G088600 Sobic003G358600--Sobic002G088600 Sobic003G358600--Sobic001G340800 Sobic003G358600--Sobic003G244400 Sobic003G244400--Sobic001G370400 Sobic001G103100 Sobic001G103100 Sobic003G244400--Sobic001G103100 Sobic008G055200 Sobic008G055200 Sobic003G244400--Sobic008G055200 Sobic003G244400--Sobic001G432200 Sobic003G244400--Sobic006G204500 Sobic003G244400--Sobic001G340800 Sobic003G244400--Sobic002G364700 Sobic007G091400 Sobic007G091400 Sobic003G244400--Sobic007G091400 Sobic003G244400--Sobic010G003200 Sobic001G340800--Sobic001G370400 Sobic001G340800--Sobic009G061601 Sobic001G340800--Sobic008G136601 Sobic004G290600 Sobic004G290600 Sobic001G340800--Sobic004G290600 Sobic009G061500 Sobic009G061500 Sobic001G340800--Sobic009G061500 Sobic008G020800 Sobic008G020800 Sobic001G340800--Sobic008G020800 Sobic001G294500 Sobic001G294500 Sobic001G340800--Sobic001G294500 Sobic007G131000 Sobic007G131000 Sobic001G340800--Sobic007G131000 Sobic001G340800--Sobic003G093100 Sobic001G370400--Sobic009G061601 Sobic003G297100 Sobic003G297100 Sobic001G370400--Sobic003G297100 Sobic001G063300 Sobic001G063300 Sobic001G370400--Sobic001G063300 Sobic006G205400 Sobic006G205400 Sobic001G370400--Sobic006G205400 Sobic001G370400--Sobic007G131000 Sobic003G151400 Sobic003G151400 Sobic001G370400--Sobic003G151400 Sobic007G215200 Sobic007G215200 Sobic001G370400--Sobic007G215200 Sobic002G015900 Sobic002G015900 Sobic001G370400--Sobic002G015900 Sobic001G370400--Sobic001G294500 Sobic009G148600--Sobic006G193400 Sobic004G298200 Sobic004G298200 Sobic009G148600--Sobic004G298200 Sobic009G148600--Sobic007G212500 Sobic003G024400 Sobic003G024400 Sobic009G148600--Sobic003G024400 Sobic009G148600--Sobic003G244400 Sobic002G192800 Sobic002G192800 Sobic009G148600--Sobic002G192800 Sobic009G148600--Sobic006G204400 Sobic009G148600--Sobic009G178400 Sobic006G143900 Sobic006G143900 Sobic009G148600--Sobic006G143900 Sobic006G204500--Sobic009G061601 Sobic004G273600 Sobic004G273600 Sobic006G204500--Sobic004G273600 Sobic006G204500--Sobic008G020800 Sobic001G402900 Sobic001G402900 Sobic006G204500--Sobic001G402900 Sobic006G204500--Sobic010G003200 Sobic002G372000 Sobic002G372000 Sobic006G204500--Sobic002G372000 Sobic007G197000 Sobic007G197000 Sobic006G204500--Sobic007G197000 Sobic006G204500--Sobic002G364700 Sobic004G014200 Sobic004G014200 Sobic006G204500--Sobic004G014200 Sobic001G432200--Sobic003G093100 Sobic001G432200--Sobic001G370400 Sobic001G432200--Sobic003G297100 Sobic001G432200--Sobic009G061601 Sobic001G432200--Sobic003G151400 Sobic001G432200--Sobic002G088600 Sobic001G432200--Sobic004G290600 Sobic001G432200--Sobic006G204500 Sobic001G432200--Sobic001G294500
Octagon: transcription factors


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