Gene annotation
Transcriptome id Sobic.001G194800.1
Synonym Sb01g017130, ATTBP2, TBP2
Functional annotation TATA-binding protein, putative, expressed
UniProt A0A1B6QJU3
Pfam PF00352
Panther DB PTHR10126 PTHR10126:SF23
NCBI CDD KOG3302; TATA-box binding protein (TBP), component of TFIID and TFIIIB
KEGG Orthology K03120; TBP, transcription initiation factor TFIID TATA-box-binding protein
Gene Ontology GO:0006352; DNA-templated transcription, initiation GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT1G55520 : TATA binding protein 2
RAP-DB (Rice) LOC_Os03g45410.1 : TATA-binding protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G055200 dirigent, putative, expressed -
2 Sobic.005G176700 methyltransferase, putative, expressed -
3 Sobic.005G000900 OsFBX103 - F-box domain containing protein, expressed -
4 Sobic.004G050900 OsFBX248 - F-box domain containing protein, expressed -
5 Sobic.006G017700 expressed protein -
6 Sobic.002G364700 ZOS7-11 - C2H2 zinc finger protein, expressed -
7 Sobic.009G182100 cysteine proteinase inhibitor precursor protein, putative, expressed -
8 Sobic.006G017900 DEFL55 - Defensin and Defensin-like DEFL family, expressed -
9 Sobic.002G182701 - -
10 Sobic.001G211700 MBTB33 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
11 Sobic.002G156400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@MDR-like ABC transporter, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
12 Sobic.002G384900 expressed protein -
13 Sobic.005G140900 OsFBX230 - F-box domain containing protein, expressed -
14 Sobic.008G138400 expressed protein -
15 Sobic.002G381500 uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed K01087: trehalose 6-phosphate phosphatase
16 Sobic.002G097300 OsFBLD5 - F-box, LRR and FBD domain containing protein, expressed -
17 Sobic.009G110600 OsFBX422 - F-box domain containing protein, expressed -
18 Sobic.010G121700 plastocyanin-like domain containing protein, putative, expressed -
19 Sobic.008G036100 expressed protein -
20 Sobic.004G046700 OsFBLD3 - F-box, LRR and FBD domain containing protein, expressed -


Gene co-expression network
sample Sobic001G194800 Sobic001G194800 Sobic008G055200 Sobic008G055200 Sobic001G194800--Sobic008G055200 Sobic005G176700 Sobic005G176700 Sobic001G194800--Sobic005G176700 Sobic005G000900 Sobic005G000900 Sobic001G194800--Sobic005G000900 Sobic004G050900 Sobic004G050900 Sobic001G194800--Sobic004G050900 Sobic006G017700 Sobic006G017700 Sobic001G194800--Sobic006G017700 Sobic002G364700 Sobic002G364700 Sobic001G194800--Sobic002G364700 Sobic009G182100 Sobic009G182100 Sobic001G194800--Sobic009G182100 Sobic006G017900 Sobic006G017900 Sobic001G194800--Sobic006G017900 Sobic002G182701 Sobic002G182701 Sobic001G194800--Sobic002G182701 Sobic008G055200--Sobic005G176700 Sobic005G148000 Sobic005G148000 Sobic008G055200--Sobic005G148000 Sobic005G040100 Sobic005G040100 Sobic008G055200--Sobic005G040100 Sobic001G192300 Sobic001G192300 Sobic008G055200--Sobic001G192300 Sobic004G094400 Sobic004G094400 Sobic008G055200--Sobic004G094400 Sobic001G143700 Sobic001G143700 Sobic008G055200--Sobic001G143700 Sobic002G006200 Sobic002G006200 Sobic008G055200--Sobic002G006200 Sobic002G097300 Sobic002G097300 Sobic008G055200--Sobic002G097300 Sobic008G138400 Sobic008G138400 Sobic008G055200--Sobic008G138400 Sobic010G121700 Sobic010G121700 Sobic005G176700--Sobic010G121700 Sobic008G020800 Sobic008G020800 Sobic005G176700--Sobic008G020800 Sobic008G024200 Sobic008G024200 Sobic005G176700--Sobic008G024200 Sobic005G189100 Sobic005G189100 Sobic005G176700--Sobic005G189100 Sobic009G234900 Sobic009G234900 Sobic005G176700--Sobic009G234900 Sobic005G176700--Sobic002G006200 Sobic001G089300 Sobic001G089300 Sobic005G176700--Sobic001G089300 Sobic001G167300 Sobic001G167300 Sobic005G176700--Sobic001G167300 Sobic005G176700--Sobic001G143700 Sobic005G000900--Sobic006G017700 Sobic005G000900--Sobic002G182701 Sobic005G000900--Sobic006G017900 Sobic002G156400 Sobic002G156400 Sobic005G000900--Sobic002G156400 Sobic002G384900 Sobic002G384900 Sobic005G000900--Sobic002G384900 Sobic001G211700 Sobic001G211700 Sobic005G000900--Sobic001G211700 Sobic005G000900--Sobic009G182100 Sobic005G140900 Sobic005G140900 Sobic005G000900--Sobic005G140900 Sobic004G100300 Sobic004G100300 Sobic005G000900--Sobic004G100300 Sobic004G050900--Sobic005G000900 Sobic009G047100 Sobic009G047100 Sobic004G050900--Sobic009G047100 Sobic004G050900--Sobic005G140900 Sobic004G050900--Sobic002G156400 Sobic004G050900--Sobic009G182100 Sobic004G050900--Sobic006G017700 Sobic004G050900--Sobic008G138400 Sobic004G050900--Sobic002G097300 Sobic004G050900--Sobic008G024200 Sobic006G017700--Sobic002G182701 Sobic006G017700--Sobic006G017900 Sobic006G017700--Sobic001G211700 Sobic006G017700--Sobic002G384900 Sobic006G017700--Sobic005G000900 Sobic006G017700--Sobic005G140900 Sobic006G017700--Sobic002G156400 Sobic006G017700--Sobic009G182100 Sobic006G017700--Sobic008G138400 Sobic006G204500 Sobic006G204500 Sobic002G364700--Sobic006G204500 Sobic002G364700--Sobic005G176700 Sobic001G370400 Sobic001G370400 Sobic002G364700--Sobic001G370400 Sobic006G115700 Sobic006G115700 Sobic002G364700--Sobic006G115700 Sobic002G364700--Sobic008G020800 Sobic002G307400 Sobic002G307400 Sobic002G364700--Sobic002G307400 Sobic002G364700--Sobic004G100300 Sobic003G070400 Sobic003G070400 Sobic002G364700--Sobic003G070400 Sobic006G070032 Sobic006G070032 Sobic002G364700--Sobic006G070032 Sobic009G182100--Sobic002G182701 Sobic009G182100--Sobic006G017700 Sobic009G182100--Sobic005G000900 Sobic009G182100--Sobic006G017900 Sobic009G182100--Sobic002G156400 Sobic009G182100--Sobic001G211700 Sobic009G182100--Sobic005G140900 Sobic009G182100--Sobic002G384900 Sobic009G182100--Sobic008G138400 Sobic006G017900--Sobic001G211700 Sobic006G017900--Sobic006G017700 Sobic006G017900--Sobic002G182701 Sobic006G017900--Sobic002G384900 Sobic004G046700 Sobic004G046700 Sobic006G017900--Sobic004G046700 Sobic006G017900--Sobic005G000900 Sobic010G123800 Sobic010G123800 Sobic006G017900--Sobic010G123800 Sobic007G082100 Sobic007G082100 Sobic006G017900--Sobic007G082100 Sobic006G017900--Sobic004G100300 Sobic002G182701--Sobic006G017700 Sobic002G182701--Sobic006G017900 Sobic002G182701--Sobic001G211700 Sobic002G182701--Sobic002G384900 Sobic002G182701--Sobic005G000900 Sobic002G182701--Sobic004G100300 Sobic002G182701--Sobic009G182100 Sobic002G182701--Sobic002G156400 Sobic002G182701--Sobic005G140900
Octagon: transcription factors


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