Gene annotation
Transcriptome id Sobic.009G148600.1
Synonym Sb09g021300
Functional annotation DUF803 domain containing, putative, expressed
UniProt C5YYD0
Pfam PF05653
Panther DB PTHR12570 PTHR12570:SF18
NCBI CDD KOG2922; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0015693magnesium ion transport GO:0015095magnesium ion transmembrane transporter activity


Orthologs (automatic annotation)
TAIR AT4G38730 : Protein of unknown function (DUF803)
RAP-DB (Rice) LOC_Os05g35570.1 : DUF803 domain containing, putative, expressed
MaizeGDB (Corn) Zm00025a037324
Brachypodium KQK10832
Barley HORVU3Hr1G082230.8 , HORVU3Hr1G082230.9 , HORVU3Hr1G082230.4 , HORVU3Hr1G082230.5 , HORVU3Hr1G082230.6 , HORVU3Hr1G082230.7 , HORVU3Hr1G082230.1 , HORVU3Hr1G082230.2 , HORVU3Hr1G082230.3 , HORVU3Hr1G082230.10
Wheat TraesCS3A02G383600 , TraesCS3B02G416000 , TraesCS3A02G383600 , TraesCS3D02G376700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G193400 regulatory protein, putative, expressed -
2 Sobic.004G298200 Plant VAMP (vesicle-associated membrane protein) family protein(PubMedID : 26465154)@MSP domain containing protein, expressed -
3 Sobic.007G212500 nodulation protein-related, putative, expressed -
4 Sobic.003G024400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.8 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
5 Sobic.003G244400 OsFBK1 - F-box domain and kelch repeat containing protein, expressed -
6 Sobic.002G192800 - -
7 Sobic.006G204400 maltose excess protein 1-like, chloroplast precursor, putative, expressed -
8 Sobic.009G178400 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
9 Sobic.006G143900 transporter family protein, putative, expressed K08150: SLC2A13, MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13
10 Sobic.005G048500 serine esterase family protein, putative, expressed -
11 Sobic.001G194800 TATA-binding protein, putative, expressed K03120: TBP, transcription initiation factor TFIID TATA-box-binding protein
12 Sobic.009G229400 60S acidic ribosomal protein P0, putative, expressed K02941: RP-LP0, large subunit ribosomal protein LP0
13 Sobic.001G340800 exocyst complex component 6, putative, expressed -
14 Sobic.002G364700 ZOS7-11 - C2H2 zinc finger protein, expressed -
15 Sobic.006G115700 WRKY35, expressed K18835: WRKY transcription factor 2
16 Sobic.008G136700 expressed protein -
17 Sobic.009G242600 ATPCME, putative, expressed K15889: prenylcysteine alpha-carboxyl methylesterase
18 Sobic.001G370400 aberrant pollen transmission 1, putative, expressed -
19 Sobic.006G204500 pectinacetylesterase domain containing protein, expressed -
20 Sobic.010G003200 pleckstrin homology domain-containing protein-related taxo, putative, expressed -


Gene co-expression network
sample Sobic009G148600 Sobic009G148600 Sobic006G193400 Sobic006G193400 Sobic009G148600--Sobic006G193400 Sobic004G298200 Sobic004G298200 Sobic009G148600--Sobic004G298200 Sobic007G212500 Sobic007G212500 Sobic009G148600--Sobic007G212500 Sobic003G024400 Sobic003G024400 Sobic009G148600--Sobic003G024400 Sobic003G244400 Sobic003G244400 Sobic009G148600--Sobic003G244400 Sobic002G192800 Sobic002G192800 Sobic009G148600--Sobic002G192800 Sobic006G204400 Sobic006G204400 Sobic009G148600--Sobic006G204400 Sobic009G178400 Sobic009G178400 Sobic009G148600--Sobic009G178400 Sobic006G143900 Sobic006G143900 Sobic009G148600--Sobic006G143900 Sobic006G193400--Sobic006G204400 Sobic006G193400--Sobic007G212500 Sobic003G358600 Sobic003G358600 Sobic006G193400--Sobic003G358600 Sobic006G193400--Sobic003G244400 Sobic001G340800 Sobic001G340800 Sobic006G193400--Sobic001G340800 Sobic001G370400 Sobic001G370400 Sobic006G193400--Sobic001G370400 Sobic006G193400--Sobic009G148600 Sobic006G204500 Sobic006G204500 Sobic006G193400--Sobic006G204500 Sobic001G432200 Sobic001G432200 Sobic006G193400--Sobic001G432200 Sobic001G194800 Sobic001G194800 Sobic004G298200--Sobic001G194800 Sobic001G112600 Sobic001G112600 Sobic004G298200--Sobic001G112600 Sobic006G115700 Sobic006G115700 Sobic004G298200--Sobic006G115700 Sobic002G364700 Sobic002G364700 Sobic004G298200--Sobic002G364700 Sobic004G298200--Sobic003G244400 Sobic008G055200 Sobic008G055200 Sobic004G298200--Sobic008G055200 Sobic005G050400 Sobic005G050400 Sobic004G298200--Sobic005G050400 Sobic004G298200--Sobic002G192800 Sobic010G253600 Sobic010G253600 Sobic004G298200--Sobic010G253600 Sobic007G212500--Sobic003G244400 Sobic007G212500--Sobic001G370400 Sobic010G003200 Sobic010G003200 Sobic007G212500--Sobic010G003200 Sobic007G212500--Sobic001G432200 Sobic009G061601 Sobic009G061601 Sobic007G212500--Sobic009G061601 Sobic007G212500--Sobic006G204500 Sobic003G093100 Sobic003G093100 Sobic007G212500--Sobic003G093100 Sobic007G212500--Sobic001G340800 Sobic007G212500--Sobic002G364700 Sobic001G106800 Sobic001G106800 Sobic003G024400--Sobic001G106800 Sobic003G024400--Sobic006G204400 Sobic007G086900 Sobic007G086900 Sobic003G024400--Sobic007G086900 Sobic003G024400--Sobic006G143900 Sobic001G241401 Sobic001G241401 Sobic003G024400--Sobic001G241401 Sobic002G030300 Sobic002G030300 Sobic003G024400--Sobic002G030300 Sobic003G014200 Sobic003G014200 Sobic003G024400--Sobic003G014200 Sobic005G055700 Sobic005G055700 Sobic003G024400--Sobic005G055700 Sobic002G111100 Sobic002G111100 Sobic003G024400--Sobic002G111100 Sobic003G244400--Sobic001G370400 Sobic001G103100 Sobic001G103100 Sobic003G244400--Sobic001G103100 Sobic003G244400--Sobic008G055200 Sobic003G244400--Sobic001G432200 Sobic003G244400--Sobic006G204500 Sobic003G244400--Sobic001G340800 Sobic003G244400--Sobic002G364700 Sobic007G091400 Sobic007G091400 Sobic003G244400--Sobic007G091400 Sobic003G244400--Sobic010G003200 Sobic002G384900 Sobic002G384900 Sobic002G192800--Sobic002G384900 Sobic006G017900 Sobic006G017900 Sobic002G192800--Sobic006G017900 Sobic006G017700 Sobic006G017700 Sobic002G192800--Sobic006G017700 Sobic002G182701 Sobic002G182701 Sobic002G192800--Sobic002G182701 Sobic001G211700 Sobic001G211700 Sobic002G192800--Sobic001G211700 Sobic004G100300 Sobic004G100300 Sobic002G192800--Sobic004G100300 Sobic005G221675 Sobic005G221675 Sobic002G192800--Sobic005G221675 Sobic004G046700 Sobic004G046700 Sobic002G192800--Sobic004G046700 Sobic005G140900 Sobic005G140900 Sobic002G192800--Sobic005G140900 Sobic006G204400--Sobic001G106800 Sobic006G001100 Sobic006G001100 Sobic006G204400--Sobic006G001100 Sobic007G176900 Sobic007G176900 Sobic006G204400--Sobic007G176900 Sobic008G136601 Sobic008G136601 Sobic006G204400--Sobic008G136601 Sobic006G097400 Sobic006G097400 Sobic006G204400--Sobic006G097400 Sobic006G204400--Sobic002G111100 Sobic001G163666 Sobic001G163666 Sobic006G204400--Sobic001G163666 Sobic008G103250 Sobic008G103250 Sobic006G204400--Sobic008G103250 Sobic006G204400--Sobic001G241401 Sobic001G384200 Sobic001G384200 Sobic009G178400--Sobic001G384200 Sobic009G178400--Sobic001G340800 Sobic002G233600 Sobic002G233600 Sobic009G178400--Sobic002G233600 Sobic008G166100 Sobic008G166100 Sobic009G178400--Sobic008G166100 Sobic007G039200 Sobic007G039200 Sobic009G178400--Sobic007G039200 Sobic007G048101 Sobic007G048101 Sobic009G178400--Sobic007G048101 Sobic009G178400--Sobic001G432200 Sobic001G308000 Sobic001G308000 Sobic009G178400--Sobic001G308000 Sobic002G088600 Sobic002G088600 Sobic009G178400--Sobic002G088600 Sobic004G273600 Sobic004G273600 Sobic006G143900--Sobic004G273600 Sobic005G145400 Sobic005G145400 Sobic006G143900--Sobic005G145400 Sobic006G143900--Sobic007G176900 Sobic001G135950 Sobic001G135950 Sobic006G143900--Sobic001G135950 Sobic004G295050 Sobic004G295050 Sobic006G143900--Sobic004G295050 Sobic010G001200 Sobic010G001200 Sobic006G143900--Sobic010G001200 Sobic005G037700 Sobic005G037700 Sobic006G143900--Sobic005G037700 Sobic003G420500 Sobic003G420500 Sobic006G143900--Sobic003G420500 Sobic003G333100 Sobic003G333100 Sobic006G143900--Sobic003G333100
Octagon: transcription factors


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