Gene annotation
Transcriptome id Sobic.010G112600.1
Synonym Sb10g009750
Functional annotation integral membrane protein, putative, expressed
UniProt A0A194YIH5
Pfam PF00892
Panther DB PTHR12715 PTHR12715:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0016020membrane


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g49940.1 : integral membrane protein, putative, expressed
MaizeGDB (Corn) Zm00025a042685
Brachypodium -
Barley HORVU0Hr1G032280.20 , HORVU0Hr1G032280.21 , HORVU0Hr1G032280.22 , HORVU0Hr1G032280.23 , HORVU0Hr1G032280.24 , HORVU0Hr1G032280.25 , HORVU0Hr1G032280.26 , HORVU7Hr1G042700.24 , HORVU0Hr1G032280.28 , HORVU0Hr1G032280.29 , HORVU7Hr1G042590.66 , HORVU7Hr1G042590.67 , HORVU7Hr1G042590.61 , HORVU7Hr1G042590.62 , HORVU7Hr1G042590.63 , HORVU7Hr1G042700.20 , HORVU7Hr1G042700.27 , HORVU7Hr1G042700.26 , HORVU7Hr1G042700.32 , HORVU7Hr1G042700.25 , HORVU7Hr1G042590.65 , HORVU7Hr1G042700.29 , HORVU0Hr1G032280.15 , HORVU0Hr1G032280.14 , HORVU0Hr1G032280.17 , HORVU0Hr1G032280.16 , HORVU0Hr1G032280.11 , HORVU0Hr1G032280.10 , HORVU0Hr1G032280.13 , HORVU0Hr1G032280.12 , HORVU0Hr1G032280.19 , HORVU0Hr1G032280.18 , HORVU7Hr1G042590.51 , HORVU7Hr1G042590.53 , HORVU7Hr1G042590.52 , HORVU7Hr1G042590.55 , HORVU7Hr1G042590.54 , HORVU7Hr1G042590.57 , HORVU7Hr1G042590.56 , HORVU7Hr1G042590.59 , HORVU7Hr1G042590.58 , HORVU7Hr1G042700.34 , HORVU7Hr1G042700.22 , HORVU7Hr1G042700.18 , HORVU7Hr1G042590.46 , HORVU7Hr1G042590.47 , HORVU7Hr1G042590.44 , HORVU7Hr1G042590.45 , HORVU7Hr1G042590.42 , HORVU7Hr1G042590.40 , HORVU7Hr1G042590.41 , HORVU7Hr1G042700.36 , HORVU7Hr1G042590.48 , HORVU7Hr1G042590.49 , HORVU7Hr1G042700.21 , HORVU0Hr1G032280.3 , HORVU0Hr1G032280.2 , HORVU0Hr1G032280.5 , HORVU0Hr1G032280.4 , HORVU0Hr1G032280.7 , HORVU0Hr1G032280.6 , HORVU0Hr1G032280.9 , HORVU0Hr1G032280.8 , HORVU7Hr1G042700.37 , HORVU7Hr1G042700.10 , HORVU7Hr1G042590.33 , HORVU7Hr1G042590.32 , HORVU7Hr1G042590.31 , HORVU7Hr1G042590.30 , HORVU7Hr1G042590.37 , HORVU7Hr1G042590.36 , HORVU7Hr1G042590.35 , HORVU7Hr1G042590.34 , HORVU7Hr1G042700.12 , HORVU7Hr1G042700.13 , HORVU7Hr1G042590.39 , HORVU7Hr1G042590.38 , HORVU7Hr1G042700.16 , HORVU7Hr1G042700.17 , HORVU7Hr1G042700.14 , HORVU7Hr1G042700.15 , HORVU7Hr1G042550.31 , HORVU7Hr1G042550.30 , HORVU7Hr1G042700.33 , HORVU7Hr1G042700.11 , HORVU7Hr1G042590.20 , HORVU7Hr1G042590.21 , HORVU7Hr1G042590.22 , HORVU7Hr1G042590.23 , HORVU7Hr1G042590.24 , HORVU7Hr1G042590.25 , HORVU7Hr1G042590.26 , HORVU7Hr1G042590.27 , HORVU7Hr1G042590.28 , HORVU7Hr1G042590.29 , HORVU7Hr1G042550.28 , HORVU7Hr1G042550.29 , HORVU7Hr1G042550.24 , HORVU7Hr1G042550.25 , HORVU7Hr1G042550.26 , HORVU7Hr1G042550.27 , HORVU7Hr1G042550.20 , HORVU7Hr1G042550.21 , HORVU7Hr1G042550.22 , HORVU7Hr1G042550.23 , HORVU7Hr1G042700.23 , HORVU7Hr1G042590.15 , HORVU7Hr1G042550.4 , HORVU7Hr1G042590.17 , HORVU7Hr1G042590.16 , HORVU7Hr1G042590.11 , HORVU7Hr1G042590.10 , HORVU7Hr1G042590.13 , HORVU7Hr1G042590.12 , HORVU7Hr1G042590.19 , HORVU7Hr1G042590.18 , HORVU7Hr1G042550.3 , HORVU7Hr1G042700.19 , HORVU7Hr1G042700.1 , HORVU7Hr1G042700.2 , HORVU7Hr1G042700.3 , HORVU7Hr1G042700.4 , HORVU7Hr1G042700.5 , HORVU7Hr1G042700.6 , HORVU7Hr1G042700.7 , HORVU7Hr1G042700.8 , HORVU7Hr1G042700.9 , HORVU7Hr1G042550.5 , HORVU7Hr1G042700.31 , HORVU7Hr1G042550.7 , HORVU7Hr1G042550.6 , HORVU0Hr1G032280.42 , HORVU0Hr1G032280.40 , HORVU0Hr1G032280.41 , HORVU7Hr1G042550.1 , HORVU7Hr1G042700.35 , HORVU7Hr1G042550.11 , HORVU7Hr1G042550.10 , HORVU7Hr1G042550.13 , HORVU7Hr1G042550.12 , HORVU7Hr1G042550.15 , HORVU7Hr1G042550.14 , HORVU7Hr1G042550.17 , HORVU7Hr1G042550.16 , HORVU7Hr1G042550.19 , HORVU7Hr1G042550.18 , HORVU7Hr1G042550.2 , HORVU7Hr1G042590.1 , HORVU7Hr1G042590.2 , HORVU7Hr1G042590.4 , HORVU7Hr1G042590.7 , HORVU7Hr1G042590.6 , HORVU7Hr1G042590.9 , HORVU7Hr1G042590.8 , HORVU0Hr1G032280.33 , HORVU0Hr1G032280.32 , HORVU0Hr1G032280.31 , HORVU0Hr1G032280.30 , HORVU0Hr1G032280.37 , HORVU0Hr1G032280.36 , HORVU0Hr1G032280.35 , HORVU0Hr1G032280.34 , HORVU7Hr1G042550.9 , HORVU0Hr1G032280.39 , HORVU0Hr1G032280.38 , HORVU7Hr1G042550.8 , HORVU7Hr1G042700.30 , HORVU7Hr1G042700.28
Wheat TraesCS7A02G209000 , TraesCS7B02G116100 , TraesCS7B02G116100 , TraesCS7D02G211200 , TraesCS7D02G211200
Populus -


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cDNA sequences
Sobic.010G112600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G123400 expressed protein -
2 Sobic.003G117800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
3 Sobic.004G194400 expressed protein -
4 Sobic.010G277700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IPP transferase, putative, expressed K00791: miaA, tRNA dimethylallyltransferase
5 Sobic.003G190200 Sec1 family transport protein, putative, expressed -
6 Sobic.009G252300 expressed protein -
7 Sobic.003G394500 GPI transamidase component PIG-S-related, putative, expressed K05291: GPI-anchor transamidase subunit S
8 Sobic.006G237500 PPR repeat domain containing protein, putative, expressed -
9 Sobic.008G155400 ankyrin, putative, expressed -
10 Sobic.009G046900 N-acetylglucosaminyltransferase, putative, expressed -
11 Sobic.001G052100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide domain containing protein, putative, expressed -
12 Sobic.007G030100 galactosyltransferase family protein, putative, expressed -
13 Sobic.006G134500 calcium-binding mitochondrial protein anon-60Da, putative, expressed K17800: LETM1, LETM1 and EF-hand domain-containing protein 1, mitochondrial
14 Sobic.003G368400 sterol 3-beta-glucosyltransferase, putative, expressed K05841: sterol 3beta-glucosyltransferase
15 Sobic.010G255900 DNL zinc finger domain containing protein, putative, expressed K17808: ZIM17, DNLZ, mitochondrial protein import protein ZIM17
16 Sobic.003G428000 expressed protein -
17 Sobic.010G134650 - -
18 Sobic.006G191000 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
19 Sobic.006G071362 - K02021: putative ABC transport system ATP-binding protein
20 Sobic.010G086300 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ


Gene co-expression network
sample Sobic010G112600 Sobic010G112600 Sobic005G123400 Sobic005G123400 Sobic010G112600--Sobic005G123400 Sobic003G117800 Sobic003G117800 Sobic010G112600--Sobic003G117800 Sobic004G194400 Sobic004G194400 Sobic010G112600--Sobic004G194400 Sobic010G277700 Sobic010G277700 Sobic010G112600--Sobic010G277700 Sobic003G190200 Sobic003G190200 Sobic010G112600--Sobic003G190200 Sobic009G252300 Sobic009G252300 Sobic010G112600--Sobic009G252300 Sobic003G394500 Sobic003G394500 Sobic010G112600--Sobic003G394500 Sobic006G237500 Sobic006G237500 Sobic010G112600--Sobic006G237500 Sobic008G155400 Sobic008G155400 Sobic010G112600--Sobic008G155400 Sobic005G123400--Sobic006G237500 Sobic005G123400--Sobic010G112600 Sobic003G393200 Sobic003G393200 Sobic005G123400--Sobic003G393200 Sobic001G043200 Sobic001G043200 Sobic005G123400--Sobic001G043200 Sobic009G227100 Sobic009G227100 Sobic005G123400--Sobic009G227100 Sobic005G123400--Sobic009G252300 Sobic007G030100 Sobic007G030100 Sobic005G123400--Sobic007G030100 Sobic005G123400--Sobic003G190200 Sobic003G368400 Sobic003G368400 Sobic005G123400--Sobic003G368400 Sobic001G424800 Sobic001G424800 Sobic003G117800--Sobic001G424800 Sobic003G385300 Sobic003G385300 Sobic003G117800--Sobic003G385300 Sobic003G117800--Sobic003G394500 Sobic001G057400 Sobic001G057400 Sobic003G117800--Sobic001G057400 Sobic008G152700 Sobic008G152700 Sobic003G117800--Sobic008G152700 Sobic001G149000 Sobic001G149000 Sobic003G117800--Sobic001G149000 Sobic001G356200 Sobic001G356200 Sobic003G117800--Sobic001G356200 Sobic001G385000 Sobic001G385000 Sobic003G117800--Sobic001G385000 Sobic009G046900 Sobic009G046900 Sobic003G117800--Sobic009G046900 Sobic006G071362 Sobic006G071362 Sobic004G194400--Sobic006G071362 Sobic006G134500 Sobic006G134500 Sobic004G194400--Sobic006G134500 Sobic006G265800 Sobic006G265800 Sobic004G194400--Sobic006G265800 Sobic003G428000 Sobic003G428000 Sobic004G194400--Sobic003G428000 Sobic004G194400--Sobic010G277700 Sobic001G308500 Sobic001G308500 Sobic004G194400--Sobic001G308500 Sobic004G194400--Sobic001G149000 Sobic004G194400--Sobic003G385300 Sobic010G274800 Sobic010G274800 Sobic004G194400--Sobic010G274800 Sobic010G277700--Sobic006G071362 Sobic010G277700--Sobic004G194400 Sobic010G277700--Sobic006G134500 Sobic010G134650 Sobic010G134650 Sobic010G277700--Sobic010G134650 Sobic010G277700--Sobic009G046900 Sobic008G022400 Sobic008G022400 Sobic010G277700--Sobic008G022400 Sobic004G189000 Sobic004G189000 Sobic010G277700--Sobic004G189000 Sobic010G130601 Sobic010G130601 Sobic010G277700--Sobic010G130601 Sobic010G277700--Sobic010G112600 Sobic003G190200--Sobic007G030100 Sobic003G190200--Sobic003G394500 Sobic007G172700 Sobic007G172700 Sobic003G190200--Sobic007G172700 Sobic003G021600 Sobic003G021600 Sobic003G190200--Sobic003G021600 Sobic003G190200--Sobic009G252300 Sobic003G190200--Sobic001G424800 Sobic003G190200--Sobic003G393200 Sobic003G190200--Sobic003G428000 Sobic003G190200--Sobic001G385000 Sobic009G252300--Sobic003G428000 Sobic009G252300--Sobic003G190200 Sobic009G252300--Sobic001G149000 Sobic001G141400 Sobic001G141400 Sobic009G252300--Sobic001G141400 Sobic009G252300--Sobic005G123400 Sobic009G252300--Sobic003G117800 Sobic009G252300--Sobic010G134650 Sobic007G192400 Sobic007G192400 Sobic009G252300--Sobic007G192400 Sobic009G252300--Sobic008G152700 Sobic003G394500--Sobic003G117800 Sobic003G394500--Sobic001G385000 Sobic004G350700 Sobic004G350700 Sobic003G394500--Sobic004G350700 Sobic001G378800 Sobic001G378800 Sobic003G394500--Sobic001G378800 Sobic007G118500 Sobic007G118500 Sobic003G394500--Sobic007G118500 Sobic003G394500--Sobic003G190200 Sobic006G232800 Sobic006G232800 Sobic003G394500--Sobic006G232800 Sobic003G394500--Sobic007G030100 Sobic003G394500--Sobic001G424800 Sobic006G237500--Sobic005G123400 Sobic006G237500--Sobic003G393200 Sobic006G237500--Sobic007G030100 Sobic006G237500--Sobic010G112600 Sobic004G353300 Sobic004G353300 Sobic006G237500--Sobic004G353300 Sobic001G052100 Sobic001G052100 Sobic006G237500--Sobic001G052100 Sobic001G051400 Sobic001G051400 Sobic006G237500--Sobic001G051400 Sobic003G194800 Sobic003G194800 Sobic006G237500--Sobic003G194800 Sobic004G215600 Sobic004G215600 Sobic006G237500--Sobic004G215600 Sobic002G158300 Sobic002G158300 Sobic008G155400--Sobic002G158300 Sobic003G342500 Sobic003G342500 Sobic008G155400--Sobic003G342500 Sobic005G171700 Sobic005G171700 Sobic008G155400--Sobic005G171700 Sobic004G140400 Sobic004G140400 Sobic008G155400--Sobic004G140400 Sobic002G102300 Sobic002G102300 Sobic008G155400--Sobic002G102300 Sobic008G036600 Sobic008G036600 Sobic008G155400--Sobic008G036600 Sobic001G270700 Sobic001G270700 Sobic008G155400--Sobic001G270700 Sobic003G213000 Sobic003G213000 Sobic008G155400--Sobic003G213000 Sobic002G108100 Sobic002G108100 Sobic008G155400--Sobic002G108100
Octagon: transcription factors


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