Gene annotation
Transcriptome id Sobic.010G255900.1
Synonym Sb10g029320
Functional annotation DNL zinc finger domain containing protein, putative, expressed
UniProt C5Z9A5
Pfam PF05180
Panther DB PTHR20922 PTHR20922:SF17
NCBI CDD KOG3277; Uncharacterized conserved protein
KEGG Orthology K17808; ZIM17, DNLZ, mitochondrial protein import protein ZIM17
Gene Ontology GO:0008270; zinc ion binding


Orthologs (automatic annotation)
TAIR AT1G68730 : Zim17-type zinc finger protein
RAP-DB (Rice) LOC_Os01g42050.1 : DNL zinc finger domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a028638
Brachypodium KQK08629 , KQK18823
Barley HORVU1Hr1G013160.10 , HORVU1Hr1G013160.11 , HORVU1Hr1G013160.4 , HORVU1Hr1G013160.5 , HORVU1Hr1G013160.6 , HORVU1Hr1G013160.7 , HORVU1Hr1G013160.1 , HORVU1Hr1G013160.2 , HORVU1Hr1G013160.3 , HORVU1Hr1G013160.8 , HORVU1Hr1G013160.9 , HORVU3Hr1G052890.5 , HORVU3Hr1G052890.4 , HORVU3Hr1G052890.6 , HORVU3Hr1G052890.3 , HORVU3Hr1G052890.2
Wheat TraesCS1B02G081400 , TraesCS1A02G063500 , TraesCS1D02G064000 , TraesCS3D02G218000 , TraesCS1D02G064000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G185500 - -
2 Sobic.006G162400 expressed protein -
3 Sobic.001G356200 nucleoside-triphosphatase, putative, expressed K01510: ENTPD1_3_8, apyrase
4 Sobic.003G385300 Ser/Thr protein phosphatase family protein, putative, expressed -
5 Sobic.001G504500 expressed protein -
6 Sobic.001G149000 FAR1 family protein, expressed -
7 Sobic.003G117800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
8 Sobic.003G353700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
9 Sobic.003G428000 expressed protein -
10 Sobic.002G074800 - -
11 Sobic.008G152700 expressed protein K07541: GPI mannosyltransferase 1 subunit X
12 Sobic.002G389600 transcription regulator, putative, expressed -
13 Sobic.001G057400 expressed protein -
14 Sobic.004G194400 expressed protein -
15 Sobic.008G036600 expressed protein -
16 Sobic.009G046900 N-acetylglucosaminyltransferase, putative, expressed -
17 Sobic.004G004100 nucleic acid binding protein, putative, expressed -
18 Sobic.004G189000 - -
19 Sobic.007G039200 MYB family transcription factor, putative, expressed -
20 Sobic.004G077300 guanine nucleotide exchange family protein, putative, expressed K18442: ARFGEF, brefeldin A-inhibited guanine nucleotide-exchange protein


Gene co-expression network
sample Sobic010G255900 Sobic010G255900 Sobic005G185500 Sobic005G185500 Sobic010G255900--Sobic005G185500 Sobic006G162400 Sobic006G162400 Sobic010G255900--Sobic006G162400 Sobic001G356200 Sobic001G356200 Sobic010G255900--Sobic001G356200 Sobic003G385300 Sobic003G385300 Sobic010G255900--Sobic003G385300 Sobic001G504500 Sobic001G504500 Sobic010G255900--Sobic001G504500 Sobic001G149000 Sobic001G149000 Sobic010G255900--Sobic001G149000 Sobic003G117800 Sobic003G117800 Sobic010G255900--Sobic003G117800 Sobic003G353700 Sobic003G353700 Sobic010G255900--Sobic003G353700 Sobic003G428000 Sobic003G428000 Sobic010G255900--Sobic003G428000 Sobic002G389600 Sobic002G389600 Sobic005G185500--Sobic002G389600 Sobic005G185500--Sobic003G385300 Sobic006G093600 Sobic006G093600 Sobic005G185500--Sobic006G093600 Sobic007G039200 Sobic007G039200 Sobic005G185500--Sobic007G039200 Sobic006G001100 Sobic006G001100 Sobic005G185500--Sobic006G001100 Sobic005G225500 Sobic005G225500 Sobic005G185500--Sobic005G225500 Sobic002G102300 Sobic002G102300 Sobic005G185500--Sobic002G102300 Sobic006G162500 Sobic006G162500 Sobic005G185500--Sobic006G162500 Sobic003G402800 Sobic003G402800 Sobic005G185500--Sobic003G402800 Sobic001G453600 Sobic001G453600 Sobic006G162400--Sobic001G453600 Sobic004G046800 Sobic004G046800 Sobic006G162400--Sobic004G046800 Sobic006G134500 Sobic006G134500 Sobic006G162400--Sobic006G134500 Sobic006G162400--Sobic001G356200 Sobic009G046900 Sobic009G046900 Sobic006G162400--Sobic009G046900 Sobic006G162400--Sobic010G255900 Sobic004G113600 Sobic004G113600 Sobic006G162400--Sobic004G113600 Sobic001G387300 Sobic001G387300 Sobic006G162400--Sobic001G387300 Sobic010G130601 Sobic010G130601 Sobic006G162400--Sobic010G130601 Sobic001G356200--Sobic004G113600 Sobic001G400000 Sobic001G400000 Sobic001G356200--Sobic001G400000 Sobic001G356200--Sobic003G385300 Sobic001G356200--Sobic007G039200 Sobic001G424800 Sobic001G424800 Sobic001G356200--Sobic001G424800 Sobic004G107100 Sobic004G107100 Sobic001G356200--Sobic004G107100 Sobic003G089100 Sobic003G089100 Sobic001G356200--Sobic003G089100 Sobic001G356200--Sobic003G117800 Sobic001G356200--Sobic006G134500 Sobic003G385300--Sobic001G149000 Sobic003G385300--Sobic003G402800 Sobic004G077300 Sobic004G077300 Sobic003G385300--Sobic004G077300 Sobic004G064200 Sobic004G064200 Sobic003G385300--Sobic004G064200 Sobic004G176200 Sobic004G176200 Sobic003G385300--Sobic004G176200 Sobic001G257800 Sobic001G257800 Sobic003G385300--Sobic001G257800 Sobic003G385300--Sobic005G225500 Sobic003G385300--Sobic007G039200 Sobic002G074800 Sobic002G074800 Sobic003G385300--Sobic002G074800 Sobic001G504500--Sobic001G453600 Sobic001G504500--Sobic002G389600 Sobic001G024400 Sobic001G024400 Sobic001G504500--Sobic001G024400 Sobic004G349450 Sobic004G349450 Sobic001G504500--Sobic004G349450 Sobic010G202200 Sobic010G202200 Sobic001G504500--Sobic010G202200 Sobic003G024100 Sobic003G024100 Sobic001G504500--Sobic003G024100 Sobic001G133400 Sobic001G133400 Sobic001G504500--Sobic001G133400 Sobic002G414800 Sobic002G414800 Sobic001G504500--Sobic002G414800 Sobic001G504500--Sobic007G039200 Sobic001G149000--Sobic004G077300 Sobic008G152700 Sobic008G152700 Sobic001G149000--Sobic008G152700 Sobic001G149000--Sobic003G385300 Sobic001G149000--Sobic009G046900 Sobic001G384200 Sobic001G384200 Sobic001G149000--Sobic001G384200 Sobic009G178400 Sobic009G178400 Sobic001G149000--Sobic009G178400 Sobic001G280500 Sobic001G280500 Sobic001G149000--Sobic001G280500 Sobic008G166100 Sobic008G166100 Sobic001G149000--Sobic008G166100 Sobic001G149000--Sobic001G387300 Sobic003G117800--Sobic001G424800 Sobic003G117800--Sobic003G385300 Sobic003G394500 Sobic003G394500 Sobic003G117800--Sobic003G394500 Sobic001G057400 Sobic001G057400 Sobic003G117800--Sobic001G057400 Sobic003G117800--Sobic008G152700 Sobic003G117800--Sobic001G149000 Sobic003G117800--Sobic001G356200 Sobic001G385000 Sobic001G385000 Sobic003G117800--Sobic001G385000 Sobic003G117800--Sobic009G046900 Sobic007G192400 Sobic007G192400 Sobic003G353700--Sobic007G192400 Sobic008G036600 Sobic008G036600 Sobic003G353700--Sobic008G036600 Sobic005G063200 Sobic005G063200 Sobic003G353700--Sobic005G063200 Sobic003G353700--Sobic001G024400 Sobic003G353700--Sobic007G039200 Sobic010G181600 Sobic010G181600 Sobic003G353700--Sobic010G181600 Sobic003G236000 Sobic003G236000 Sobic003G353700--Sobic003G236000 Sobic004G074600 Sobic004G074600 Sobic003G353700--Sobic004G074600 Sobic008G006000 Sobic008G006000 Sobic003G353700--Sobic008G006000 Sobic003G428000--Sobic001G149000 Sobic003G428000--Sobic009G046900 Sobic004G194400 Sobic004G194400 Sobic003G428000--Sobic004G194400 Sobic003G428000--Sobic008G152700 Sobic010G274800 Sobic010G274800 Sobic003G428000--Sobic010G274800 Sobic009G252300 Sobic009G252300 Sobic003G428000--Sobic009G252300 Sobic003G428000--Sobic003G385300 Sobic004G082800 Sobic004G082800 Sobic003G428000--Sobic004G082800 Sobic003G428000--Sobic002G074800
Octagon: transcription factors


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