Gene annotation
Transcriptome id Sobic.009G252300.1,Sobic.009G252300.6,Sobic.009G252300.3,Sobic.009G252300.5,Sobic.009G252300.4,Sobic.009G252300.2
Synonym Sb09g030300
Functional annotation expressed protein
UniProt A0A1Z5R416 , A0A1Z5R419 , A0A1Z5R4Z4 , C5YWK6 , A0A1Z5R4P1
Pfam -
Panther DB PTHR14000 PTHR14000:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G53440 : Homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os01g40000.1 : expressed protein
MaizeGDB (Corn) Zm00025a036760 , Zm00025a036763 , Zm00025a044782
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G428000 expressed protein -
2 Sobic.003G190200 Sec1 family transport protein, putative, expressed -
3 Sobic.001G149000 FAR1 family protein, expressed -
4 Sobic.001G141400 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
5 Sobic.005G123400 expressed protein -
6 Sobic.003G117800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
7 Sobic.010G134650 - -
8 Sobic.007G192400 zinc ion binding protein, putative, expressed K15196: BRF1, transcription factor IIIB 90 kDa subunit
9 Sobic.008G152700 expressed protein K07541: GPI mannosyltransferase 1 subunit X
10 Sobic.009G046900 N-acetylglucosaminyltransferase, putative, expressed -
11 Sobic.001G280500 abscisic acid insensitive 8, putative, expressed -
12 Sobic.003G021600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K13117: ATP-dependent RNA helicase DDX35
13 Sobic.001G057400 expressed protein -
14 Sobic.007G030100 galactosyltransferase family protein, putative, expressed -
15 Sobic.005G063200 expressed protein -
16 Sobic.010G112600 integral membrane protein, putative, expressed -
17 Sobic.003G385300 Ser/Thr protein phosphatase family protein, putative, expressed -
18 Sobic.003G402800 DUF647 domain containing protein, putative, expressed -
19 Sobic.010G274800 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
20 Sobic.004G004100 nucleic acid binding protein, putative, expressed -


Gene co-expression network
sample Sobic009G252300 Sobic009G252300 Sobic003G428000 Sobic003G428000 Sobic009G252300--Sobic003G428000 Sobic003G190200 Sobic003G190200 Sobic009G252300--Sobic003G190200 Sobic001G149000 Sobic001G149000 Sobic009G252300--Sobic001G149000 Sobic001G141400 Sobic001G141400 Sobic009G252300--Sobic001G141400 Sobic005G123400 Sobic005G123400 Sobic009G252300--Sobic005G123400 Sobic003G117800 Sobic003G117800 Sobic009G252300--Sobic003G117800 Sobic010G134650 Sobic010G134650 Sobic009G252300--Sobic010G134650 Sobic007G192400 Sobic007G192400 Sobic009G252300--Sobic007G192400 Sobic008G152700 Sobic008G152700 Sobic009G252300--Sobic008G152700 Sobic003G428000--Sobic001G149000 Sobic009G046900 Sobic009G046900 Sobic003G428000--Sobic009G046900 Sobic004G194400 Sobic004G194400 Sobic003G428000--Sobic004G194400 Sobic003G428000--Sobic008G152700 Sobic010G274800 Sobic010G274800 Sobic003G428000--Sobic010G274800 Sobic003G428000--Sobic009G252300 Sobic003G385300 Sobic003G385300 Sobic003G428000--Sobic003G385300 Sobic004G082800 Sobic004G082800 Sobic003G428000--Sobic004G082800 Sobic002G074800 Sobic002G074800 Sobic003G428000--Sobic002G074800 Sobic007G030100 Sobic007G030100 Sobic003G190200--Sobic007G030100 Sobic003G394500 Sobic003G394500 Sobic003G190200--Sobic003G394500 Sobic007G172700 Sobic007G172700 Sobic003G190200--Sobic007G172700 Sobic003G021600 Sobic003G021600 Sobic003G190200--Sobic003G021600 Sobic003G190200--Sobic009G252300 Sobic001G424800 Sobic001G424800 Sobic003G190200--Sobic001G424800 Sobic003G393200 Sobic003G393200 Sobic003G190200--Sobic003G393200 Sobic003G190200--Sobic003G428000 Sobic001G385000 Sobic001G385000 Sobic003G190200--Sobic001G385000 Sobic004G077300 Sobic004G077300 Sobic001G149000--Sobic004G077300 Sobic001G149000--Sobic008G152700 Sobic001G149000--Sobic003G385300 Sobic001G149000--Sobic009G046900 Sobic001G384200 Sobic001G384200 Sobic001G149000--Sobic001G384200 Sobic009G178400 Sobic009G178400 Sobic001G149000--Sobic009G178400 Sobic001G280500 Sobic001G280500 Sobic001G149000--Sobic001G280500 Sobic008G166100 Sobic008G166100 Sobic001G149000--Sobic008G166100 Sobic001G387300 Sobic001G387300 Sobic001G149000--Sobic001G387300 Sobic001G475300 Sobic001G475300 Sobic001G141400--Sobic001G475300 Sobic001G141400--Sobic009G252300 Sobic003G250400 Sobic003G250400 Sobic001G141400--Sobic003G250400 Sobic009G194000 Sobic009G194000 Sobic001G141400--Sobic009G194000 Sobic001G141400--Sobic003G190200 Sobic001G141400--Sobic007G172700 Sobic001G490900 Sobic001G490900 Sobic001G141400--Sobic001G490900 Sobic002G200000 Sobic002G200000 Sobic001G141400--Sobic002G200000 Sobic003G039900 Sobic003G039900 Sobic001G141400--Sobic003G039900 Sobic006G237500 Sobic006G237500 Sobic005G123400--Sobic006G237500 Sobic010G112600 Sobic010G112600 Sobic005G123400--Sobic010G112600 Sobic005G123400--Sobic003G393200 Sobic001G043200 Sobic001G043200 Sobic005G123400--Sobic001G043200 Sobic009G227100 Sobic009G227100 Sobic005G123400--Sobic009G227100 Sobic005G123400--Sobic009G252300 Sobic005G123400--Sobic007G030100 Sobic005G123400--Sobic003G190200 Sobic003G368400 Sobic003G368400 Sobic005G123400--Sobic003G368400 Sobic003G117800--Sobic001G424800 Sobic003G117800--Sobic003G385300 Sobic003G117800--Sobic003G394500 Sobic001G057400 Sobic001G057400 Sobic003G117800--Sobic001G057400 Sobic003G117800--Sobic008G152700 Sobic003G117800--Sobic001G149000 Sobic001G356200 Sobic001G356200 Sobic003G117800--Sobic001G356200 Sobic003G117800--Sobic001G385000 Sobic003G117800--Sobic009G046900 Sobic006G071362 Sobic006G071362 Sobic010G134650--Sobic006G071362 Sobic001G257800 Sobic001G257800 Sobic010G134650--Sobic001G257800 Sobic010G134650--Sobic003G385300 Sobic007G039200 Sobic007G039200 Sobic010G134650--Sobic007G039200 Sobic010G134650--Sobic009G046900 Sobic008G159701 Sobic008G159701 Sobic010G134650--Sobic008G159701 Sobic003G236000 Sobic003G236000 Sobic010G134650--Sobic003G236000 Sobic006G117700 Sobic006G117700 Sobic010G134650--Sobic006G117700 Sobic010G202200 Sobic010G202200 Sobic010G134650--Sobic010G202200 Sobic003G353700 Sobic003G353700 Sobic007G192400--Sobic003G353700 Sobic008G006000 Sobic008G006000 Sobic007G192400--Sobic008G006000 Sobic007G077532 Sobic007G077532 Sobic007G192400--Sobic007G077532 Sobic010G181600 Sobic010G181600 Sobic007G192400--Sobic010G181600 Sobic007G192400--Sobic009G252300 Sobic004G259300 Sobic004G259300 Sobic007G192400--Sobic004G259300 Sobic002G203600 Sobic002G203600 Sobic007G192400--Sobic002G203600 Sobic008G036600 Sobic008G036600 Sobic007G192400--Sobic008G036600 Sobic004G141400 Sobic004G141400 Sobic007G192400--Sobic004G141400 Sobic008G152700--Sobic001G149000 Sobic008G152700--Sobic003G385300 Sobic008G152700--Sobic003G117800 Sobic008G152700--Sobic004G077300 Sobic008G152700--Sobic009G046900 Sobic008G152700--Sobic007G172700 Sobic008G152700--Sobic003G428000 Sobic008G152700--Sobic003G394500 Sobic008G152700--Sobic001G385000
Octagon: transcription factors


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