Gene annotation
Transcriptome id Sobic.005G123400.1,Sobic.005G123400.8,Sobic.005G123400.5,Sobic.005G123400.7,Sobic.005G123400.6,Sobic.005G123400.4,Sobic.005G123400.2,Sobic.005G123400.3
Synonym Sb05g018100
Functional annotation expressed protein
UniProt A0A1Z5RIB4 , A0A1Z5RIW3 , A0A1Z5RI96 , A0A1Z5RI88 , A0A1B6PRZ6 , A0A1Z5RIQ2 , A0A1Z5RI81 , A0A1Z5RIB7
Pfam -
Panther DB PTHR35736 PTHR35736:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G26950 : -
RAP-DB (Rice) LOC_Os11g31110.1 : expressed protein
MaizeGDB (Corn) Zm00025a029783
Brachypodium PNT69741 , KQJ88482
Barley HORVU7Hr1G101050.30 , HORVU7Hr1G101050.2 , HORVU7Hr1G101050.3 , HORVU7Hr1G101050.6 , HORVU7Hr1G101050.7 , HORVU7Hr1G101050.5 , HORVU7Hr1G101050.9 , HORVU7Hr1G101050.27 , HORVU7Hr1G101050.10 , HORVU7Hr1G101050.13 , HORVU7Hr1G101050.14 , HORVU7Hr1G101050.15 , HORVU7Hr1G101050.17 , HORVU7Hr1G101050.18 , HORVU7Hr1G101050.19 , HORVU7Hr1G101050.22 , HORVU7Hr1G101050.25 , HORVU7Hr1G101050.26 , HORVU7Hr1G101050.21 , HORVU7Hr1G101050.20 , HORVU7Hr1G101050.28
Wheat TraesCS7A02G445400 , TraesCS7B02G344900 , TraesCS7D02G434000
Populus -


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cDNA sequences
Sobic.005G123400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G237500 PPR repeat domain containing protein, putative, expressed -
2 Sobic.010G112600 integral membrane protein, putative, expressed -
3 Sobic.003G393200 expressed protein -
4 Sobic.001G043200 expressed protein -
5 Sobic.009G227100 expressed protein -
6 Sobic.009G252300 expressed protein -
7 Sobic.007G030100 galactosyltransferase family protein, putative, expressed -
8 Sobic.003G190200 Sec1 family transport protein, putative, expressed -
9 Sobic.003G368400 sterol 3-beta-glucosyltransferase, putative, expressed K05841: sterol 3beta-glucosyltransferase
10 Sobic.002G203600 protein binding protein, putative, expressed K11975: E3 ubiquitin-protein ligase RNF144
11 Sobic.001G052100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide domain containing protein, putative, expressed -
12 Sobic.003G194800 EF hand family protein, putative, expressed -
13 Sobic.001G305900 GTP binding protein, putative, expressed -
14 Sobic.006G220400 exonuclease, putative, expressed -
15 Sobic.001G385000 nucleoside-triphosphatase, putative, expressed K14641: apyrase
16 Sobic.002G147200 esterase/lipase/thioesterase, putative, expressed -
17 Sobic.001G051400 aminoacyl-tRNA synthetase, putative, expressed -
18 Sobic.002G342300 exostosin family domain containing protein, expressed -
19 Sobic.007G192400 zinc ion binding protein, putative, expressed K15196: BRF1, transcription factor IIIB 90 kDa subunit
20 Sobic.006G170900 growth regulator related protein, putative, expressed -


Gene co-expression network
sample Sobic005G123400 Sobic005G123400 Sobic006G237500 Sobic006G237500 Sobic005G123400--Sobic006G237500 Sobic010G112600 Sobic010G112600 Sobic005G123400--Sobic010G112600 Sobic003G393200 Sobic003G393200 Sobic005G123400--Sobic003G393200 Sobic001G043200 Sobic001G043200 Sobic005G123400--Sobic001G043200 Sobic009G227100 Sobic009G227100 Sobic005G123400--Sobic009G227100 Sobic009G252300 Sobic009G252300 Sobic005G123400--Sobic009G252300 Sobic007G030100 Sobic007G030100 Sobic005G123400--Sobic007G030100 Sobic003G190200 Sobic003G190200 Sobic005G123400--Sobic003G190200 Sobic003G368400 Sobic003G368400 Sobic005G123400--Sobic003G368400 Sobic006G237500--Sobic005G123400 Sobic006G237500--Sobic003G393200 Sobic006G237500--Sobic007G030100 Sobic006G237500--Sobic010G112600 Sobic004G353300 Sobic004G353300 Sobic006G237500--Sobic004G353300 Sobic001G052100 Sobic001G052100 Sobic006G237500--Sobic001G052100 Sobic001G051400 Sobic001G051400 Sobic006G237500--Sobic001G051400 Sobic003G194800 Sobic003G194800 Sobic006G237500--Sobic003G194800 Sobic004G215600 Sobic004G215600 Sobic006G237500--Sobic004G215600 Sobic010G112600--Sobic005G123400 Sobic003G117800 Sobic003G117800 Sobic010G112600--Sobic003G117800 Sobic004G194400 Sobic004G194400 Sobic010G112600--Sobic004G194400 Sobic010G277700 Sobic010G277700 Sobic010G112600--Sobic010G277700 Sobic010G112600--Sobic003G190200 Sobic010G112600--Sobic009G252300 Sobic003G394500 Sobic003G394500 Sobic010G112600--Sobic003G394500 Sobic010G112600--Sobic006G237500 Sobic008G155400 Sobic008G155400 Sobic010G112600--Sobic008G155400 Sobic003G393200--Sobic003G190200 Sobic003G393200--Sobic005G123400 Sobic003G393200--Sobic001G051400 Sobic003G393200--Sobic006G237500 Sobic002G066800 Sobic002G066800 Sobic003G393200--Sobic002G066800 Sobic005G087300 Sobic005G087300 Sobic003G393200--Sobic005G087300 Sobic003G393200--Sobic001G043200 Sobic001G343000 Sobic001G343000 Sobic003G393200--Sobic001G343000 Sobic009G059400 Sobic009G059400 Sobic003G393200--Sobic009G059400 Sobic001G043200--Sobic005G123400 Sobic001G043200--Sobic003G190200 Sobic003G021600 Sobic003G021600 Sobic001G043200--Sobic003G021600 Sobic001G043200--Sobic003G394500 Sobic009G122500 Sobic009G122500 Sobic001G043200--Sobic009G122500 Sobic001G043200--Sobic007G030100 Sobic004G122900 Sobic004G122900 Sobic001G043200--Sobic004G122900 Sobic009G154900 Sobic009G154900 Sobic001G043200--Sobic009G154900 Sobic001G043200--Sobic003G194800 Sobic009G227100--Sobic005G123400 Sobic009G227100--Sobic001G043200 Sobic009G199500 Sobic009G199500 Sobic009G227100--Sobic009G199500 Sobic006G220400 Sobic006G220400 Sobic009G227100--Sobic006G220400 Sobic009G227100--Sobic009G252300 Sobic009G227100--Sobic001G052100 Sobic004G334200 Sobic004G334200 Sobic009G227100--Sobic004G334200 Sobic009G227100--Sobic003G190200 Sobic009G227100--Sobic010G112600 Sobic003G428000 Sobic003G428000 Sobic009G252300--Sobic003G428000 Sobic009G252300--Sobic003G190200 Sobic001G149000 Sobic001G149000 Sobic009G252300--Sobic001G149000 Sobic001G141400 Sobic001G141400 Sobic009G252300--Sobic001G141400 Sobic009G252300--Sobic005G123400 Sobic009G252300--Sobic003G117800 Sobic010G134650 Sobic010G134650 Sobic009G252300--Sobic010G134650 Sobic007G192400 Sobic007G192400 Sobic009G252300--Sobic007G192400 Sobic008G152700 Sobic008G152700 Sobic009G252300--Sobic008G152700 Sobic007G030100--Sobic003G190200 Sobic002G147200 Sobic002G147200 Sobic007G030100--Sobic002G147200 Sobic007G030100--Sobic003G394500 Sobic007G030100--Sobic003G117800 Sobic001G385000 Sobic001G385000 Sobic007G030100--Sobic001G385000 Sobic007G172700 Sobic007G172700 Sobic007G030100--Sobic007G172700 Sobic001G424800 Sobic001G424800 Sobic007G030100--Sobic001G424800 Sobic006G232800 Sobic006G232800 Sobic007G030100--Sobic006G232800 Sobic007G030100--Sobic003G428000 Sobic003G190200--Sobic007G030100 Sobic003G190200--Sobic003G394500 Sobic003G190200--Sobic007G172700 Sobic003G190200--Sobic003G021600 Sobic003G190200--Sobic009G252300 Sobic003G190200--Sobic001G424800 Sobic003G190200--Sobic003G393200 Sobic003G190200--Sobic003G428000 Sobic003G190200--Sobic001G385000 Sobic003G368400--Sobic005G123400 Sobic003G368400--Sobic001G385000 Sobic003G368400--Sobic003G194800 Sobic003G368400--Sobic010G112600 Sobic010G086300 Sobic010G086300 Sobic003G368400--Sobic010G086300 Sobic003G402900 Sobic003G402900 Sobic003G368400--Sobic003G402900 Sobic003G368400--Sobic003G190200 Sobic003G368400--Sobic003G393200 Sobic003G368400--Sobic003G394500
Octagon: transcription factors


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