Gene annotation
Transcriptome id Sobic.001G305900.1
Synonym ATTOC132, TOC132, Sb01g029790
Functional annotation GTP binding protein, putative, expressed
UniProt C5WTD6
Pfam PF01926 PF11886
Panther DB PTHR10903 PTHR10903:SF47
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005525; GTP binding


Orthologs (automatic annotation)
TAIR AT2G16640 : multimeric translocon complex in the outer envelope membrane 132
RAP-DB (Rice) LOC_Os10g40110.1 : GTP binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a003270 , Zm00025a052018
Brachypodium PNT70150 , PNT70147 , KQK03278 , KQK03277 , PNT70148 , PNT70149
Barley HORVU1Hr1G053280.5 , HORVU1Hr1G053280.4 , HORVU1Hr1G053280.1 , HORVU1Hr1G053280.3 , HORVU1Hr1G053280.2
Wheat -
Populus -


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cDNA sequences
Sobic.001G305900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G218600 phosphoribosyl transferase, putative, expressed K00761: upp, uracil phosphoribosyltransferase
2 Sobic.001G050500 galactosyltransferase family protein, putative, expressed -
3 Sobic.005G063200 expressed protein -
4 Sobic.009G186700 TraB family protein, putative, expressed -
5 Sobic.003G255700 ubiquitin-conjugating enzyme domain containing protein, expressed K10581: ubiquitin-conjugating enzyme E2 O
6 Sobic.002G348400 adenylyl-sulfate kinase, putative, expressed K00860: adenylylsulfate kinase
7 Sobic.001G280500 abscisic acid insensitive 8, putative, expressed -
8 Sobic.002G158300 ankyrin, putative, expressed -
9 Sobic.003G308300 OsProCP1 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed K01285: lysosomal Pro-X carboxypeptidase
10 Sobic.007G086600 indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed K01609: indole-3-glycerol phosphate synthase
11 Sobic.008G041300 - K14777: DDX47, ATP-dependent RNA helicase DDX47/RRP3
12 Sobic.010G255400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
13 Sobic.010G160300 RNA recognition motif containing protein, putative, expressed -
14 Sobic.002G313100 STE_PAK_Ste20_MST_like.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08838: serine/threonine-protein kinase 24/25/MST4
15 Sobic.002G304500 mutS family domain IV containing protein, expressed K08740: DNA mismatch repair protein MSH4
16 Sobic.001G076600 hydrolase, acting on carbon-nitrogen, putative, expressed -
17 Sobic.006G100266 - -
18 Sobic.009G072033 - -
19 Sobic.005G123400 expressed protein -
20 Sobic.002G274700 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase


Gene co-expression network
sample Sobic001G305900 Sobic001G305900 Sobic007G218600 Sobic007G218600 Sobic001G305900--Sobic007G218600 Sobic001G050500 Sobic001G050500 Sobic001G305900--Sobic001G050500 Sobic005G063200 Sobic005G063200 Sobic001G305900--Sobic005G063200 Sobic009G186700 Sobic009G186700 Sobic001G305900--Sobic009G186700 Sobic003G255700 Sobic003G255700 Sobic001G305900--Sobic003G255700 Sobic002G348400 Sobic002G348400 Sobic001G305900--Sobic002G348400 Sobic001G280500 Sobic001G280500 Sobic001G305900--Sobic001G280500 Sobic002G158300 Sobic002G158300 Sobic001G305900--Sobic002G158300 Sobic003G308300 Sobic003G308300 Sobic001G305900--Sobic003G308300 Sobic007G218600--Sobic009G186700 Sobic007G218600--Sobic001G305900 Sobic007G148400 Sobic007G148400 Sobic007G218600--Sobic007G148400 Sobic007G218600--Sobic003G255700 Sobic007G218600--Sobic001G280500 Sobic007G218600--Sobic003G308300 Sobic001G114200 Sobic001G114200 Sobic007G218600--Sobic001G114200 Sobic010G181600 Sobic010G181600 Sobic007G218600--Sobic010G181600 Sobic010G160300 Sobic010G160300 Sobic007G218600--Sobic010G160300 Sobic001G050500--Sobic001G305900 Sobic001G050500--Sobic003G255700 Sobic001G050500--Sobic009G186700 Sobic001G050500--Sobic007G218600 Sobic003G270100 Sobic003G270100 Sobic001G050500--Sobic003G270100 Sobic001G050500--Sobic007G148400 Sobic001G050500--Sobic003G308300 Sobic001G050500--Sobic010G160300 Sobic006G100266 Sobic006G100266 Sobic001G050500--Sobic006G100266 Sobic001G384200 Sobic001G384200 Sobic005G063200--Sobic001G384200 Sobic005G063200--Sobic001G280500 Sobic008G166100 Sobic008G166100 Sobic005G063200--Sobic008G166100 Sobic003G211800 Sobic003G211800 Sobic005G063200--Sobic003G211800 Sobic001G149000 Sobic001G149000 Sobic005G063200--Sobic001G149000 Sobic001G076600 Sobic001G076600 Sobic005G063200--Sobic001G076600 Sobic002G097200 Sobic002G097200 Sobic005G063200--Sobic002G097200 Sobic003G385300 Sobic003G385300 Sobic005G063200--Sobic003G385300 Sobic009G106700 Sobic009G106700 Sobic005G063200--Sobic009G106700 Sobic009G186700--Sobic007G218600 Sobic009G186700--Sobic003G255700 Sobic009G186700--Sobic001G305900 Sobic009G186700--Sobic003G308300 Sobic009G186700--Sobic001G050500 Sobic009G186700--Sobic001G114200 Sobic009G186700--Sobic001G280500 Sobic008G013200 Sobic008G013200 Sobic009G186700--Sobic008G013200 Sobic009G186700--Sobic007G148400 Sobic003G255700--Sobic006G100266 Sobic003G255700--Sobic003G308300 Sobic003G255700--Sobic009G186700 Sobic002G066700 Sobic002G066700 Sobic003G255700--Sobic002G066700 Sobic003G255700--Sobic001G305900 Sobic003G255700--Sobic008G013200 Sobic002G016000 Sobic002G016000 Sobic003G255700--Sobic002G016000 Sobic003G255700--Sobic001G050500 Sobic005G201200 Sobic005G201200 Sobic003G255700--Sobic005G201200 Sobic010G153400 Sobic010G153400 Sobic002G348400--Sobic010G153400 Sobic002G392400 Sobic002G392400 Sobic002G348400--Sobic002G392400 Sobic007G086600 Sobic007G086600 Sobic002G348400--Sobic007G086600 Sobic001G117900 Sobic001G117900 Sobic002G348400--Sobic001G117900 Sobic002G348400--Sobic001G305900 Sobic001G309200 Sobic001G309200 Sobic002G348400--Sobic001G309200 Sobic002G348400--Sobic001G280500 Sobic003G004800 Sobic003G004800 Sobic002G348400--Sobic003G004800 Sobic001G188000 Sobic001G188000 Sobic002G348400--Sobic001G188000 Sobic002G414800 Sobic002G414800 Sobic001G280500--Sobic002G414800 Sobic001G280500--Sobic001G149000 Sobic001G280500--Sobic005G063200 Sobic001G280500--Sobic001G384200 Sobic001G280500--Sobic008G166100 Sobic008G022400 Sobic008G022400 Sobic001G280500--Sobic008G022400 Sobic001G280500--Sobic010G160300 Sobic001G424800 Sobic001G424800 Sobic001G280500--Sobic001G424800 Sobic006G265800 Sobic006G265800 Sobic001G280500--Sobic006G265800 Sobic002G158300--Sobic002G016000 Sobic010G255400 Sobic010G255400 Sobic002G158300--Sobic010G255400 Sobic002G015700 Sobic002G015700 Sobic002G158300--Sobic002G015700 Sobic002G304500 Sobic002G304500 Sobic002G158300--Sobic002G304500 Sobic008G041300 Sobic008G041300 Sobic002G158300--Sobic008G041300 Sobic002G158300--Sobic005G201200 Sobic002G158300--Sobic003G211800 Sobic004G064800 Sobic004G064800 Sobic002G158300--Sobic004G064800 Sobic006G013600 Sobic006G013600 Sobic002G158300--Sobic006G013600 Sobic003G308300--Sobic003G255700 Sobic003G308300--Sobic008G013200 Sobic003G308300--Sobic009G186700 Sobic003G308300--Sobic007G148400 Sobic003G308300--Sobic007G218600 Sobic003G308300--Sobic001G305900 Sobic004G328100 Sobic004G328100 Sobic003G308300--Sobic004G328100 Sobic003G308300--Sobic006G100266 Sobic003G308300--Sobic003G270100
Octagon: transcription factors


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