Gene annotation
Transcriptome id Sobic.002G348400.1
Synonym Sb02g037100, APK3
Functional annotation adenylyl-sulfate kinase, putative, expressed
UniProt C5XCB7
Pfam PF01583
Panther DB PTHR11055 PTHR11055:SF22
NCBI CDD KOG0635; Adenosine 5'-phosphosulfate kinase
KEGG Orthology K00860; adenylylsulfate kinase
Gene Ontology GO:0005524; ATP binding GO:0004020adenylylsulfate kinase activity GO:0000103sulfate assimilation


Orthologs (automatic annotation)
TAIR AT3G03900 : adenosine-5\'-phosphosulfate (APS) kinase 3
RAP-DB (Rice) LOC_Os07g38560.1 : adenylyl-sulfate kinase, putative, expressed
MaizeGDB (Corn) Zm00025a014964 , Zm00025a048467
Brachypodium KQK15599 , KQK15610 , KQK15611 , KQK15612 , KQK15609 , KQK15608 , KQK15601 , KQK15600 , KQK15603 , KQK15602 , KQK15605 , KQK15604 , KQK15607 , KQK15606 , PNT74894 , PNT74893 , PNT74890 , PNT74891 , PNT74889 , PNT74888
Barley HORVU2Hr1G037890.1 , HORVU2Hr1G037890.3 , HORVU2Hr1G037890.2 , HORVU2Hr1G037890.5 , HORVU2Hr1G037890.4 , HORVU2Hr1G037890.7 , HORVU2Hr1G037890.6 , HORVU2Hr1G037890.9 , HORVU2Hr1G037890.8 , HORVU2Hr1G037890.14 , HORVU2Hr1G037890.11 , HORVU2Hr1G037890.10 , HORVU2Hr1G037890.13 , HORVU2Hr1G037890.12
Wheat TraesCS2D02G203500 , TraesCS2B02G223200 , TraesCS2D02G203500 , TraesCS2D02G203500 , TraesCS2A02G184200
Populus -


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cDNA sequences
Sobic.002G348400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G153400 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
2 Sobic.002G392400 expressed protein -
3 Sobic.007G086600 indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed K01609: indole-3-glycerol phosphate synthase
4 Sobic.001G117900 CAMK_KIN1/SNF1/Nim1_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07359: calcium/calmodulin-dependent protein kinase kinase 2
5 Sobic.001G305900 GTP binding protein, putative, expressed -
6 Sobic.001G309200 fatty acid hydroxylase, putative, expressed K14423: plant 4,4-dimethylsterol C-4alpha-methyl-monooxygenase
7 Sobic.001G280500 abscisic acid insensitive 8, putative, expressed -
8 Sobic.003G004800 ATP binding protein, putative, expressed -
9 Sobic.001G188000 SAM-dependent methyltransferase, putative, expressed -
10 Sobic.002G239400 OsFBX338 - F-box domain containing protein, expressed -
11 Sobic.008G022400 EMB2748, putative, expressed -
12 Sobic.004G328100 expressed protein -
13 Sobic.007G105700 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
14 Sobic.001G485300 transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
15 Sobic.001G433600 - -
16 Sobic.010G160300 RNA recognition motif containing protein, putative, expressed -
17 Sobic.001G076600 hydrolase, acting on carbon-nitrogen, putative, expressed -
18 Sobic.002G414800 PPR repeat domain containing protein, putative, expressed -
19 Sobic.006G232800 expressed protein K17785: IMMT, FCJ1, mitofilin
20 Sobic.002G377900 mitosis protein dim1, putative, expressed -


Gene co-expression network
sample Sobic002G348400 Sobic002G348400 Sobic010G153400 Sobic010G153400 Sobic002G348400--Sobic010G153400 Sobic002G392400 Sobic002G392400 Sobic002G348400--Sobic002G392400 Sobic007G086600 Sobic007G086600 Sobic002G348400--Sobic007G086600 Sobic001G117900 Sobic001G117900 Sobic002G348400--Sobic001G117900 Sobic001G305900 Sobic001G305900 Sobic002G348400--Sobic001G305900 Sobic001G309200 Sobic001G309200 Sobic002G348400--Sobic001G309200 Sobic001G280500 Sobic001G280500 Sobic002G348400--Sobic001G280500 Sobic003G004800 Sobic003G004800 Sobic002G348400--Sobic003G004800 Sobic001G188000 Sobic001G188000 Sobic002G348400--Sobic001G188000 Sobic010G153400--Sobic002G348400 Sobic010G153400--Sobic003G004800 Sobic010G153400--Sobic002G392400 Sobic008G022400 Sobic008G022400 Sobic010G153400--Sobic008G022400 Sobic001G131900 Sobic001G131900 Sobic010G153400--Sobic001G131900 Sobic003G293400 Sobic003G293400 Sobic010G153400--Sobic003G293400 Sobic006G265800 Sobic006G265800 Sobic010G153400--Sobic006G265800 Sobic010G153400--Sobic001G117900 Sobic004G328100 Sobic004G328100 Sobic010G153400--Sobic004G328100 Sobic007G105700 Sobic007G105700 Sobic002G392400--Sobic007G105700 Sobic002G308000 Sobic002G308000 Sobic002G392400--Sobic002G308000 Sobic002G392400--Sobic001G117900 Sobic002G392400--Sobic002G348400 Sobic002G313100 Sobic002G313100 Sobic002G392400--Sobic002G313100 Sobic002G392400--Sobic003G293400 Sobic002G392400--Sobic001G131900 Sobic006G232800 Sobic006G232800 Sobic002G392400--Sobic006G232800 Sobic002G392400--Sobic010G153400 Sobic007G086600--Sobic003G004800 Sobic007G086600--Sobic001G117900 Sobic005G048600 Sobic005G048600 Sobic007G086600--Sobic005G048600 Sobic007G086600--Sobic003G293400 Sobic003G022000 Sobic003G022000 Sobic007G086600--Sobic003G022000 Sobic007G086600--Sobic002G348400 Sobic001G433600 Sobic001G433600 Sobic007G086600--Sobic001G433600 Sobic002G193500 Sobic002G193500 Sobic007G086600--Sobic002G193500 Sobic009G201000 Sobic009G201000 Sobic007G086600--Sobic009G201000 Sobic001G117900--Sobic002G308000 Sobic001G117900--Sobic001G433600 Sobic001G117900--Sobic002G392400 Sobic001G117900--Sobic007G086600 Sobic005G060100 Sobic005G060100 Sobic001G117900--Sobic005G060100 Sobic001G117900--Sobic007G105700 Sobic001G117900--Sobic002G348400 Sobic009G025700 Sobic009G025700 Sobic001G117900--Sobic009G025700 Sobic001G117900--Sobic003G004800 Sobic007G218600 Sobic007G218600 Sobic001G305900--Sobic007G218600 Sobic001G050500 Sobic001G050500 Sobic001G305900--Sobic001G050500 Sobic005G063200 Sobic005G063200 Sobic001G305900--Sobic005G063200 Sobic009G186700 Sobic009G186700 Sobic001G305900--Sobic009G186700 Sobic003G255700 Sobic003G255700 Sobic001G305900--Sobic003G255700 Sobic001G305900--Sobic002G348400 Sobic001G305900--Sobic001G280500 Sobic002G158300 Sobic002G158300 Sobic001G305900--Sobic002G158300 Sobic003G308300 Sobic003G308300 Sobic001G305900--Sobic003G308300 Sobic001G309200--Sobic002G348400 Sobic001G309200--Sobic001G188000 Sobic003G260600 Sobic003G260600 Sobic001G309200--Sobic003G260600 Sobic001G309200--Sobic001G117900 Sobic009G066200 Sobic009G066200 Sobic001G309200--Sobic009G066200 Sobic001G309200--Sobic002G308000 Sobic001G309200--Sobic002G392400 Sobic001G309200--Sobic010G153400 Sobic001G309200--Sobic007G086600 Sobic002G414800 Sobic002G414800 Sobic001G280500--Sobic002G414800 Sobic001G149000 Sobic001G149000 Sobic001G280500--Sobic001G149000 Sobic001G280500--Sobic005G063200 Sobic001G384200 Sobic001G384200 Sobic001G280500--Sobic001G384200 Sobic008G166100 Sobic008G166100 Sobic001G280500--Sobic008G166100 Sobic001G280500--Sobic008G022400 Sobic010G160300 Sobic010G160300 Sobic001G280500--Sobic010G160300 Sobic001G424800 Sobic001G424800 Sobic001G280500--Sobic001G424800 Sobic001G280500--Sobic006G265800 Sobic003G004800--Sobic007G086600 Sobic003G004800--Sobic006G265800 Sobic001G385300 Sobic001G385300 Sobic003G004800--Sobic001G385300 Sobic001G076600 Sobic001G076600 Sobic003G004800--Sobic001G076600 Sobic003G004800--Sobic003G293400 Sobic003G004800--Sobic010G153400 Sobic001G308500 Sobic001G308500 Sobic003G004800--Sobic001G308500 Sobic003G004800--Sobic001G117900 Sobic003G004800--Sobic005G060100 Sobic010G069500 Sobic010G069500 Sobic001G188000--Sobic010G069500 Sobic001G188000--Sobic002G414800 Sobic001G188000--Sobic004G328100 Sobic001G188000--Sobic002G348400 Sobic001G188000--Sobic001G280500 Sobic001G188000--Sobic001G309200 Sobic002G397900 Sobic002G397900 Sobic001G188000--Sobic002G397900 Sobic001G188000--Sobic001G131900 Sobic002G304500 Sobic002G304500 Sobic001G188000--Sobic002G304500
Octagon: transcription factors


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