Gene annotation
Transcriptome id Sobic.002G239400.1
Synonym
Functional annotation OsFBX338 - F-box domain containing protein, expressed
UniProt A0A1B6QD61
Pfam PF08268 PF12937
Panther DB PTHR31790 PTHR31790:SF22
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G22700 : F-box and associated interaction domains-containing protein
RAP-DB (Rice) LOC_Os09g34200.1 : OsFBX338 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G239400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G213400 ATP8, putative, expressed -
2 Sobic.002G348400 adenylyl-sulfate kinase, putative, expressed K00860: adenylylsulfate kinase
3 Sobic.001G131900 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
4 Sobic.001G117900 CAMK_KIN1/SNF1/Nim1_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07359: calcium/calmodulin-dependent protein kinase kinase 2
5 Sobic.002G392400 expressed protein -
6 Sobic.003G293400 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
7 Sobic.007G105700 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
8 Sobic.009G054400 ECT protein, putative, expressed -
9 Sobic.005G048600 expressed protein -
10 Sobic.010G153400 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
11 Sobic.001G440000 ras-related protein, putative, expressed K07933: Rab-like protein 3
12 Sobic.010G009700 OsFBX182 - F-box domain containing protein, expressed -
13 Sobic.004G298600 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
14 Sobic.005G060100 growth regulator related protein, putative, expressed -
15 Sobic.003G352900 OsFtsH3 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
16 Sobic.001G076600 hydrolase, acting on carbon-nitrogen, putative, expressed -
17 Sobic.002G308000 powdery mildew resistant protein 5, putative, expressed -
18 Sobic.002G336400 OsFBLD4 - F-box, LRR and FBD domain containing protein, expressed -
19 Sobic.003G258100 dynamin family protein, putative, expressed -
20 Sobic.001G433600 - -


Gene co-expression network
sample Sobic002G239400 Sobic002G239400 Sobic004G213400 Sobic004G213400 Sobic002G239400--Sobic004G213400 Sobic002G348400 Sobic002G348400 Sobic002G239400--Sobic002G348400 Sobic001G131900 Sobic001G131900 Sobic002G239400--Sobic001G131900 Sobic001G117900 Sobic001G117900 Sobic002G239400--Sobic001G117900 Sobic002G392400 Sobic002G392400 Sobic002G239400--Sobic002G392400 Sobic003G293400 Sobic003G293400 Sobic002G239400--Sobic003G293400 Sobic007G105700 Sobic007G105700 Sobic002G239400--Sobic007G105700 Sobic009G054400 Sobic009G054400 Sobic002G239400--Sobic009G054400 Sobic005G048600 Sobic005G048600 Sobic002G239400--Sobic005G048600 Sobic004G213400--Sobic002G239400 Sobic005G110547 Sobic005G110547 Sobic004G213400--Sobic005G110547 Sobic004G298600 Sobic004G298600 Sobic004G213400--Sobic004G298600 Sobic004G213400--Sobic003G293400 Sobic001G248400 Sobic001G248400 Sobic004G213400--Sobic001G248400 Sobic004G213400--Sobic001G131900 Sobic009G220700 Sobic009G220700 Sobic004G213400--Sobic009G220700 Sobic002G308000 Sobic002G308000 Sobic004G213400--Sobic002G308000 Sobic004G213400--Sobic007G105700 Sobic010G153400 Sobic010G153400 Sobic002G348400--Sobic010G153400 Sobic002G348400--Sobic002G392400 Sobic007G086600 Sobic007G086600 Sobic002G348400--Sobic007G086600 Sobic002G348400--Sobic001G117900 Sobic001G305900 Sobic001G305900 Sobic002G348400--Sobic001G305900 Sobic001G309200 Sobic001G309200 Sobic002G348400--Sobic001G309200 Sobic001G280500 Sobic001G280500 Sobic002G348400--Sobic001G280500 Sobic003G004800 Sobic003G004800 Sobic002G348400--Sobic003G004800 Sobic001G188000 Sobic001G188000 Sobic002G348400--Sobic001G188000 Sobic001G131900--Sobic003G293400 Sobic003G352900 Sobic003G352900 Sobic001G131900--Sobic003G352900 Sobic004G038400 Sobic004G038400 Sobic001G131900--Sobic004G038400 Sobic001G076600 Sobic001G076600 Sobic001G131900--Sobic001G076600 Sobic001G385300 Sobic001G385300 Sobic001G131900--Sobic001G385300 Sobic005G045800 Sobic005G045800 Sobic001G131900--Sobic005G045800 Sobic001G131900--Sobic004G298600 Sobic002G420100 Sobic002G420100 Sobic001G131900--Sobic002G420100 Sobic007G144100 Sobic007G144100 Sobic001G131900--Sobic007G144100 Sobic001G117900--Sobic002G308000 Sobic001G433600 Sobic001G433600 Sobic001G117900--Sobic001G433600 Sobic001G117900--Sobic002G392400 Sobic001G117900--Sobic007G086600 Sobic005G060100 Sobic005G060100 Sobic001G117900--Sobic005G060100 Sobic001G117900--Sobic007G105700 Sobic001G117900--Sobic002G348400 Sobic009G025700 Sobic009G025700 Sobic001G117900--Sobic009G025700 Sobic001G117900--Sobic003G004800 Sobic002G392400--Sobic007G105700 Sobic002G392400--Sobic002G308000 Sobic002G392400--Sobic001G117900 Sobic002G392400--Sobic002G348400 Sobic002G313100 Sobic002G313100 Sobic002G392400--Sobic002G313100 Sobic002G392400--Sobic003G293400 Sobic002G392400--Sobic001G131900 Sobic006G232800 Sobic006G232800 Sobic002G392400--Sobic006G232800 Sobic002G392400--Sobic010G153400 Sobic003G293400--Sobic001G131900 Sobic003G293400--Sobic003G352900 Sobic004G198300 Sobic004G198300 Sobic003G293400--Sobic004G198300 Sobic003G293400--Sobic001G076600 Sobic003G293400--Sobic002G420100 Sobic003G293400--Sobic004G038400 Sobic004G026600 Sobic004G026600 Sobic003G293400--Sobic004G026600 Sobic003G293400--Sobic004G298600 Sobic003G293400--Sobic007G144100 Sobic007G105700--Sobic002G392400 Sobic007G105700--Sobic002G308000 Sobic007G105700--Sobic005G060100 Sobic007G105700--Sobic001G433600 Sobic007G105700--Sobic001G385300 Sobic001G308500 Sobic001G308500 Sobic007G105700--Sobic001G308500 Sobic007G105700--Sobic004G298600 Sobic008G085950 Sobic008G085950 Sobic007G105700--Sobic008G085950 Sobic007G105700--Sobic001G117900 Sobic009G054400--Sobic001G433600 Sobic010G009700 Sobic010G009700 Sobic009G054400--Sobic010G009700 Sobic009G054400--Sobic007G105700 Sobic009G054400--Sobic002G392400 Sobic002G241100 Sobic002G241100 Sobic009G054400--Sobic002G241100 Sobic009G054400--Sobic002G239400 Sobic009G054400--Sobic005G060100 Sobic008G047500 Sobic008G047500 Sobic009G054400--Sobic008G047500 Sobic003G200000 Sobic003G200000 Sobic009G054400--Sobic003G200000 Sobic005G048600--Sobic007G086600 Sobic005G048600--Sobic003G352900 Sobic001G073700 Sobic001G073700 Sobic005G048600--Sobic001G073700 Sobic005G048600--Sobic003G293400 Sobic005G048600--Sobic001G076600 Sobic003G217800 Sobic003G217800 Sobic005G048600--Sobic003G217800 Sobic005G048600--Sobic007G144100 Sobic005G048600--Sobic005G060100 Sobic005G048600--Sobic005G045800
Octagon: transcription factors


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