Gene annotation
Transcriptome id Sobic.005G048600.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6PQ81
Pfam PF12872 PF01936
Panther DB PTHR14379 PTHR14379:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0010468; regulation of gene expression GO:0005777peroxisome


Orthologs (automatic annotation)
TAIR AT5G09840 : Putative endonuclease or glycosyl hydrolase
RAP-DB (Rice) LOC_Os11g06680.2 : expressed protein
MaizeGDB (Corn) Zm00025a034177
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G086600 indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed K01609: indole-3-glycerol phosphate synthase
2 Sobic.003G352900 OsFtsH3 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
3 Sobic.001G073700 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
4 Sobic.003G293400 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
5 Sobic.001G076600 hydrolase, acting on carbon-nitrogen, putative, expressed -
6 Sobic.003G217800 ras-related protein, putative, expressed K07936: GTP-binding nuclear protein Ran
7 Sobic.007G144100 eukaryotic translation initiation factor 3 subunit C, putative, expressed K03252: translation initiation factor 3 subunit C
8 Sobic.005G060100 growth regulator related protein, putative, expressed -
9 Sobic.005G045800 serine/threonine-protein kinase WNK4, putative, expressed K08867: WNK, WNK lysine deficient protein kinase
10 Sobic.009G201000 hydrolase, acting on carbon-nitrogen, putative, expressed -
11 Sobic.003G258100 dynamin family protein, putative, expressed -
12 Sobic.001G080800 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
13 Sobic.001G117900 CAMK_KIN1/SNF1/Nim1_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07359: calcium/calmodulin-dependent protein kinase kinase 2
14 Sobic.007G102300 formin, putative, expressed -
15 Sobic.004G062600 OsFBX154 - F-box domain containing protein, expressed -
16 Sobic.009G220700 - -
17 Sobic.001G433600 - -
18 Sobic.001G506400 expressed protein -
19 Sobic.006G189000 ubiquitin-conjugating enzyme, putative, expressed K10577: UBE2I, ubiquitin-conjugating enzyme E2 I
20 Sobic.002G239400 OsFBX338 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic005G048600 Sobic005G048600 Sobic007G086600 Sobic007G086600 Sobic005G048600--Sobic007G086600 Sobic003G352900 Sobic003G352900 Sobic005G048600--Sobic003G352900 Sobic001G073700 Sobic001G073700 Sobic005G048600--Sobic001G073700 Sobic003G293400 Sobic003G293400 Sobic005G048600--Sobic003G293400 Sobic001G076600 Sobic001G076600 Sobic005G048600--Sobic001G076600 Sobic003G217800 Sobic003G217800 Sobic005G048600--Sobic003G217800 Sobic007G144100 Sobic007G144100 Sobic005G048600--Sobic007G144100 Sobic005G060100 Sobic005G060100 Sobic005G048600--Sobic005G060100 Sobic005G045800 Sobic005G045800 Sobic005G048600--Sobic005G045800 Sobic003G004800 Sobic003G004800 Sobic007G086600--Sobic003G004800 Sobic001G117900 Sobic001G117900 Sobic007G086600--Sobic001G117900 Sobic007G086600--Sobic005G048600 Sobic007G086600--Sobic003G293400 Sobic003G022000 Sobic003G022000 Sobic007G086600--Sobic003G022000 Sobic002G348400 Sobic002G348400 Sobic007G086600--Sobic002G348400 Sobic001G433600 Sobic001G433600 Sobic007G086600--Sobic001G433600 Sobic002G193500 Sobic002G193500 Sobic007G086600--Sobic002G193500 Sobic009G201000 Sobic009G201000 Sobic007G086600--Sobic009G201000 Sobic003G352900--Sobic007G144100 Sobic002G299500 Sobic002G299500 Sobic003G352900--Sobic002G299500 Sobic003G352900--Sobic001G076600 Sobic003G376900 Sobic003G376900 Sobic003G352900--Sobic003G376900 Sobic003G352900--Sobic009G201000 Sobic003G352900--Sobic005G045800 Sobic009G163100 Sobic009G163100 Sobic003G352900--Sobic009G163100 Sobic001G385300 Sobic001G385300 Sobic003G352900--Sobic001G385300 Sobic008G007600 Sobic008G007600 Sobic003G352900--Sobic008G007600 Sobic001G073700--Sobic009G201000 Sobic002G362500 Sobic002G362500 Sobic001G073700--Sobic002G362500 Sobic006G156400 Sobic006G156400 Sobic001G073700--Sobic006G156400 Sobic001G322400 Sobic001G322400 Sobic001G073700--Sobic001G322400 Sobic006G050100 Sobic006G050100 Sobic001G073700--Sobic006G050100 Sobic001G073700--Sobic003G352900 Sobic008G166100 Sobic008G166100 Sobic001G073700--Sobic008G166100 Sobic001G072000 Sobic001G072000 Sobic001G073700--Sobic001G072000 Sobic008G141100 Sobic008G141100 Sobic001G073700--Sobic008G141100 Sobic001G131900 Sobic001G131900 Sobic003G293400--Sobic001G131900 Sobic003G293400--Sobic003G352900 Sobic004G198300 Sobic004G198300 Sobic003G293400--Sobic004G198300 Sobic003G293400--Sobic001G076600 Sobic002G420100 Sobic002G420100 Sobic003G293400--Sobic002G420100 Sobic004G038400 Sobic004G038400 Sobic003G293400--Sobic004G038400 Sobic004G026600 Sobic004G026600 Sobic003G293400--Sobic004G026600 Sobic004G298600 Sobic004G298600 Sobic003G293400--Sobic004G298600 Sobic003G293400--Sobic007G144100 Sobic001G076600--Sobic003G352900 Sobic001G076600--Sobic007G144100 Sobic001G076600--Sobic008G166100 Sobic001G076600--Sobic004G038400 Sobic001G076600--Sobic002G299500 Sobic004G045632 Sobic004G045632 Sobic001G076600--Sobic004G045632 Sobic003G258100 Sobic003G258100 Sobic001G076600--Sobic003G258100 Sobic005G173700 Sobic005G173700 Sobic001G076600--Sobic005G173700 Sobic001G076600--Sobic003G376900 Sobic003G217800--Sobic007G144100 Sobic003G217800--Sobic003G258100 Sobic003G217800--Sobic003G352900 Sobic003G217800--Sobic002G299500 Sobic003G018000 Sobic003G018000 Sobic003G217800--Sobic003G018000 Sobic001G485700 Sobic001G485700 Sobic003G217800--Sobic001G485700 Sobic009G220700 Sobic009G220700 Sobic003G217800--Sobic009G220700 Sobic004G062600 Sobic004G062600 Sobic003G217800--Sobic004G062600 Sobic010G263400 Sobic010G263400 Sobic003G217800--Sobic010G263400 Sobic007G144100--Sobic003G258100 Sobic007G144100--Sobic003G352900 Sobic007G144100--Sobic001G076600 Sobic007G144100--Sobic003G217800 Sobic010G058300 Sobic010G058300 Sobic007G144100--Sobic010G058300 Sobic001G506400 Sobic001G506400 Sobic007G144100--Sobic001G506400 Sobic007G144100--Sobic002G299500 Sobic007G144100--Sobic004G045632 Sobic007G144100--Sobic004G038400 Sobic007G105700 Sobic007G105700 Sobic005G060100--Sobic007G105700 Sobic007G102300 Sobic007G102300 Sobic005G060100--Sobic007G102300 Sobic005G060100--Sobic001G385300 Sobic003G216600 Sobic003G216600 Sobic005G060100--Sobic003G216600 Sobic005G060100--Sobic001G433600 Sobic005G060100--Sobic004G298600 Sobic005G060100--Sobic001G117900 Sobic005G060100--Sobic003G352900 Sobic005G060100--Sobic001G131900 Sobic005G045800--Sobic003G352900 Sobic005G045800--Sobic003G376900 Sobic005G045800--Sobic001G385300 Sobic005G045800--Sobic002G299500 Sobic005G045800--Sobic001G131900 Sobic003G200000 Sobic003G200000 Sobic005G045800--Sobic003G200000 Sobic008G171900 Sobic008G171900 Sobic005G045800--Sobic008G171900 Sobic005G045800--Sobic009G163100 Sobic005G045800--Sobic007G144100
Octagon: transcription factors


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