Gene annotation
Transcriptome id Sobic.004G062600.2
Synonym Sb04g005220
Functional annotation OsFBX154 - F-box domain containing protein, expressed
UniProt A0A1Z5RM02
Pfam PF00646 PF08387
Panther DB PTHR31639 PTHR31639:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G13570 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os04g57920.1 : OsFBX154 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G217800 ras-related protein, putative, expressed K07936: GTP-binding nuclear protein Ran
2 Sobic.003G200000 respiratory burst oxidase, putative, expressed -
3 Sobic.010G263400 expressed protein -
4 Sobic.007G102300 formin, putative, expressed -
5 Sobic.005G045800 serine/threonine-protein kinase WNK4, putative, expressed K08867: WNK, WNK lysine deficient protein kinase
6 Sobic.003G258100 dynamin family protein, putative, expressed -
7 Sobic.003G352900 OsFtsH3 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
8 Sobic.001G091701 - -
9 Sobic.002G299500 expressed protein -
10 Sobic.009G214500 IQ calmodulin-binding motif domain containing protein, expressed -
11 Sobic.007G144100 eukaryotic translation initiation factor 3 subunit C, putative, expressed K03252: translation initiation factor 3 subunit C
12 Sobic.010G009700 OsFBX182 - F-box domain containing protein, expressed -
13 Sobic.001G131900 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
14 Sobic.001G385300 auxin-independent growth promoter protein, putative, expressed -
15 Sobic.001G506400 expressed protein -
16 Sobic.003G376900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed -
17 Sobic.008G156600 Leucine Rich Repeat family protein, expressed -
18 Sobic.009G163100 kinesin motor domain containing protein, putative, expressed K10403: kinesin family member 22
19 Sobic.005G048600 expressed protein -
20 Sobic.003G423700 endonuclease, putative, expressed K08991: crossover junction endonuclease MUS81


Gene co-expression network
sample Sobic004G062600 Sobic004G062600 Sobic003G217800 Sobic003G217800 Sobic004G062600--Sobic003G217800 Sobic003G200000 Sobic003G200000 Sobic004G062600--Sobic003G200000 Sobic010G263400 Sobic010G263400 Sobic004G062600--Sobic010G263400 Sobic007G102300 Sobic007G102300 Sobic004G062600--Sobic007G102300 Sobic005G045800 Sobic005G045800 Sobic004G062600--Sobic005G045800 Sobic003G258100 Sobic003G258100 Sobic004G062600--Sobic003G258100 Sobic003G352900 Sobic003G352900 Sobic004G062600--Sobic003G352900 Sobic001G091701 Sobic001G091701 Sobic004G062600--Sobic001G091701 Sobic002G299500 Sobic002G299500 Sobic004G062600--Sobic002G299500 Sobic007G144100 Sobic007G144100 Sobic003G217800--Sobic007G144100 Sobic003G217800--Sobic003G258100 Sobic003G217800--Sobic003G352900 Sobic003G217800--Sobic002G299500 Sobic003G018000 Sobic003G018000 Sobic003G217800--Sobic003G018000 Sobic001G485700 Sobic001G485700 Sobic003G217800--Sobic001G485700 Sobic009G220700 Sobic009G220700 Sobic003G217800--Sobic009G220700 Sobic003G217800--Sobic004G062600 Sobic003G217800--Sobic010G263400 Sobic003G200000--Sobic005G045800 Sobic009G163100 Sobic009G163100 Sobic003G200000--Sobic009G163100 Sobic007G189100 Sobic007G189100 Sobic003G200000--Sobic007G189100 Sobic003G200000--Sobic004G062600 Sobic001G385300 Sobic001G385300 Sobic003G200000--Sobic001G385300 Sobic003G200000--Sobic003G352900 Sobic008G156600 Sobic008G156600 Sobic003G200000--Sobic008G156600 Sobic004G241300 Sobic004G241300 Sobic003G200000--Sobic004G241300 Sobic002G414800 Sobic002G414800 Sobic003G200000--Sobic002G414800 Sobic007G060100 Sobic007G060100 Sobic010G263400--Sobic007G060100 Sobic010G263400--Sobic003G258100 Sobic003G072700 Sobic003G072700 Sobic010G263400--Sobic003G072700 Sobic010G263400--Sobic007G144100 Sobic004G168900 Sobic004G168900 Sobic010G263400--Sobic004G168900 Sobic010G263400--Sobic002G299500 Sobic010G263400--Sobic003G217800 Sobic004G038400 Sobic004G038400 Sobic010G263400--Sobic004G038400 Sobic004G250800 Sobic004G250800 Sobic010G263400--Sobic004G250800 Sobic009G214500 Sobic009G214500 Sobic007G102300--Sobic009G214500 Sobic005G060100 Sobic005G060100 Sobic007G102300--Sobic005G060100 Sobic007G102300--Sobic001G385300 Sobic007G102300--Sobic009G220700 Sobic007G102300--Sobic003G217800 Sobic007G102300--Sobic003G352900 Sobic003G216600 Sobic003G216600 Sobic007G102300--Sobic003G216600 Sobic007G102300--Sobic002G299500 Sobic003G005500 Sobic003G005500 Sobic007G102300--Sobic003G005500 Sobic005G045800--Sobic003G352900 Sobic003G376900 Sobic003G376900 Sobic005G045800--Sobic003G376900 Sobic005G045800--Sobic001G385300 Sobic005G045800--Sobic002G299500 Sobic001G131900 Sobic001G131900 Sobic005G045800--Sobic001G131900 Sobic005G045800--Sobic003G200000 Sobic008G171900 Sobic008G171900 Sobic005G045800--Sobic008G171900 Sobic005G045800--Sobic009G163100 Sobic005G045800--Sobic007G144100 Sobic003G258100--Sobic007G144100 Sobic003G258100--Sobic003G217800 Sobic003G258100--Sobic010G263400 Sobic001G076600 Sobic001G076600 Sobic003G258100--Sobic001G076600 Sobic003G258100--Sobic003G352900 Sobic001G506400 Sobic001G506400 Sobic003G258100--Sobic001G506400 Sobic003G258100--Sobic007G060100 Sobic003G258100--Sobic002G299500 Sobic003G258100--Sobic003G018000 Sobic003G352900--Sobic007G144100 Sobic003G352900--Sobic002G299500 Sobic003G352900--Sobic001G076600 Sobic003G352900--Sobic003G376900 Sobic009G201000 Sobic009G201000 Sobic003G352900--Sobic009G201000 Sobic003G352900--Sobic005G045800 Sobic003G352900--Sobic009G163100 Sobic003G352900--Sobic001G385300 Sobic008G007600 Sobic008G007600 Sobic003G352900--Sobic008G007600 Sobic001G091701--Sobic003G217800 Sobic001G091701--Sobic004G062600 Sobic005G048600 Sobic005G048600 Sobic001G091701--Sobic005G048600 Sobic003G293400 Sobic003G293400 Sobic001G091701--Sobic003G293400 Sobic001G091701--Sobic009G220700 Sobic003G423700 Sobic003G423700 Sobic001G091701--Sobic003G423700 Sobic010G182000 Sobic010G182000 Sobic001G091701--Sobic010G182000 Sobic001G091701--Sobic007G102300 Sobic001G352800 Sobic001G352800 Sobic001G091701--Sobic001G352800 Sobic002G299500--Sobic008G171900 Sobic002G299500--Sobic003G376900 Sobic002G299500--Sobic009G163100 Sobic005G020600 Sobic005G020600 Sobic002G299500--Sobic005G020600 Sobic002G299500--Sobic008G007600 Sobic002G299500--Sobic003G352900 Sobic002G299500--Sobic004G250800 Sobic009G202000 Sobic009G202000 Sobic002G299500--Sobic009G202000 Sobic001G072000 Sobic001G072000 Sobic002G299500--Sobic001G072000
Octagon: transcription factors


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