Gene annotation
Transcriptome id Sobic.003G423700.1
Synonym MUS81, ATMUS81
Functional annotation endonuclease, putative, expressed
UniProt A0A1B6Q848
Pfam PF02732
Panther DB PTHR13451 PTHR13451:SF0
NCBI CDD KOG2379; Endonuclease MUS81
KEGG Orthology K08991; crossover junction endonuclease MUS81
Gene Ontology GO:0004518; nuclease activity GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT4G30870 : Restriction endonuclease, type II-like superfamily protein
RAP-DB (Rice) LOC_Os01g71960.1 : endonuclease, putative, expressed
MaizeGDB (Corn) Zm00025a026040
Brachypodium KQK11523 , KQK11524
Barley -
Wheat TraesCS3D02G192600 , TraesCS3A02G188900 , TraesCS3A02G188900 , TraesCS3B02G218300 , TraesCS3B02G218300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G126800 WD domain, G-beta repeat domain containing protein, expressed K11790: DTL, CDT2, denticleless
2 Sobic.004G241300 kinesin motor domain containing protein, putative, expressed K10395: kinesin family member 4
3 Sobic.008G104000 cyclin, putative, expressed K06627: cyclin-A
4 Sobic.008G156600 Leucine Rich Repeat family protein, expressed -
5 Sobic.002G420100 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
6 Sobic.009G163100 kinesin motor domain containing protein, putative, expressed K10403: kinesin family member 22
7 Sobic.010G182000 26S protease regulatory subunit, putative, expressed K03066: PSMC5, 26S proteasome regulatory subunit T6
8 Sobic.008G171900 kinesin motor domain containing protein, putative, expressed K10406: kinesin family member C2/C3
9 Sobic.010G253200 GHMP kinases ATP-binding protein, putative, expressed K12446: L-arabinokinase
10 Sobic.009G220700 - -
11 Sobic.002G186200 ASC1, putative, expressed K04710: CERS1_2_3_4, ceramide synthetase
12 Sobic.003G293400 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
13 Sobic.001G385300 auxin-independent growth promoter protein, putative, expressed -
14 Sobic.002G172401 - K07904: Ras-related protein Rab-11A
15 Sobic.005G050400 syntaxin 6, putative, expressed -
16 Sobic.001G131900 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
17 Sobic.004G261800 sugar-responsive gene(PubMedID : 25496467)@pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
18 Sobic.001G435700 HVA22, putative, expressed K17338: receptor expression-enhancing protein 1/2/3/4
19 Sobic.009G214500 IQ calmodulin-binding motif domain containing protein, expressed -
20 Sobic.005G020600 Mad3/BUB1 homology region 1 domain containing protein, expressed -


Gene co-expression network
sample Sobic003G423700 Sobic003G423700 Sobic001G126800 Sobic001G126800 Sobic003G423700--Sobic001G126800 Sobic004G241300 Sobic004G241300 Sobic003G423700--Sobic004G241300 Sobic008G104000 Sobic008G104000 Sobic003G423700--Sobic008G104000 Sobic008G156600 Sobic008G156600 Sobic003G423700--Sobic008G156600 Sobic002G420100 Sobic002G420100 Sobic003G423700--Sobic002G420100 Sobic009G163100 Sobic009G163100 Sobic003G423700--Sobic009G163100 Sobic010G182000 Sobic010G182000 Sobic003G423700--Sobic010G182000 Sobic008G171900 Sobic008G171900 Sobic003G423700--Sobic008G171900 Sobic010G253200 Sobic010G253200 Sobic003G423700--Sobic010G253200 Sobic001G126800--Sobic003G423700 Sobic001G126800--Sobic004G241300 Sobic001G126800--Sobic008G104000 Sobic001G126800--Sobic002G420100 Sobic001G248400 Sobic001G248400 Sobic001G126800--Sobic001G248400 Sobic001G126800--Sobic010G182000 Sobic002G186200 Sobic002G186200 Sobic001G126800--Sobic002G186200 Sobic009G214500 Sobic009G214500 Sobic001G126800--Sobic009G214500 Sobic001G126800--Sobic010G253200 Sobic004G241300--Sobic008G171900 Sobic004G241300--Sobic008G156600 Sobic004G241300--Sobic009G163100 Sobic004G241300--Sobic003G423700 Sobic001G435700 Sobic001G435700 Sobic004G241300--Sobic001G435700 Sobic005G020600 Sobic005G020600 Sobic004G241300--Sobic005G020600 Sobic004G241300--Sobic002G420100 Sobic004G241300--Sobic010G253200 Sobic002G172401 Sobic002G172401 Sobic004G241300--Sobic002G172401 Sobic008G104000--Sobic003G423700 Sobic008G104000--Sobic004G241300 Sobic008G104000--Sobic010G253200 Sobic008G104000--Sobic010G182000 Sobic008G104000--Sobic002G420100 Sobic008G104000--Sobic001G126800 Sobic008G104000--Sobic001G248400 Sobic008G104000--Sobic008G156600 Sobic008G104000--Sobic008G171900 Sobic008G156600--Sobic009G163100 Sobic005G050400 Sobic005G050400 Sobic008G156600--Sobic005G050400 Sobic001G072000 Sobic001G072000 Sobic008G156600--Sobic001G072000 Sobic001G112600 Sobic001G112600 Sobic008G156600--Sobic001G112600 Sobic008G156600--Sobic005G020600 Sobic008G156600--Sobic008G171900 Sobic008G156600--Sobic004G241300 Sobic004G007400 Sobic004G007400 Sobic008G156600--Sobic004G007400 Sobic001G322400 Sobic001G322400 Sobic008G156600--Sobic001G322400 Sobic002G420100--Sobic010G253200 Sobic002G420100--Sobic010G182000 Sobic002G420100--Sobic004G241300 Sobic002G420100--Sobic003G423700 Sobic002G420100--Sobic008G156600 Sobic003G293400 Sobic003G293400 Sobic002G420100--Sobic003G293400 Sobic001G131900 Sobic001G131900 Sobic002G420100--Sobic001G131900 Sobic001G400000 Sobic001G400000 Sobic002G420100--Sobic001G400000 Sobic002G420100--Sobic008G104000 Sobic009G163100--Sobic008G156600 Sobic009G163100--Sobic005G020600 Sobic009G163100--Sobic008G171900 Sobic009G163100--Sobic001G072000 Sobic002G299500 Sobic002G299500 Sobic009G163100--Sobic002G299500 Sobic009G163100--Sobic005G050400 Sobic009G163100--Sobic001G435700 Sobic009G163100--Sobic001G112600 Sobic009G163100--Sobic001G322400 Sobic010G182000--Sobic002G420100 Sobic010G182000--Sobic003G423700 Sobic010G182000--Sobic008G156600 Sobic010G182000--Sobic008G104000 Sobic010G182000--Sobic001G072000 Sobic010G182000--Sobic009G163100 Sobic010G182000--Sobic001G400000 Sobic010G182000--Sobic002G172401 Sobic010G182000--Sobic005G050400 Sobic008G171900--Sobic002G299500 Sobic008G171900--Sobic009G163100 Sobic008G171900--Sobic004G241300 Sobic008G171900--Sobic001G435700 Sobic008G171900--Sobic008G156600 Sobic008G171900--Sobic005G020600 Sobic003G376900 Sobic003G376900 Sobic008G171900--Sobic003G376900 Sobic008G007600 Sobic008G007600 Sobic008G171900--Sobic008G007600 Sobic001G385300 Sobic001G385300 Sobic008G171900--Sobic001G385300 Sobic010G253200--Sobic002G420100 Sobic010G253200--Sobic004G241300 Sobic010G253200--Sobic003G423700 Sobic010G253200--Sobic008G104000 Sobic009G042000 Sobic009G042000 Sobic010G253200--Sobic009G042000 Sobic010G253200--Sobic002G186200 Sobic004G261800 Sobic004G261800 Sobic010G253200--Sobic004G261800 Sobic008G073500 Sobic008G073500 Sobic010G253200--Sobic008G073500 Sobic002G308000 Sobic002G308000 Sobic010G253200--Sobic002G308000
Octagon: transcription factors


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