Gene annotation
Transcriptome id Sobic.001G435700.1,Sobic.001G435700.3
Synonym Sb01g040990
Functional annotation HVA22, putative, expressed
UniProt A0A1Z5SAR6 , A0A1B6QPC3
Pfam PF03134
Panther DB PTHR12300 PTHR12300:SF48
NCBI CDD -
KEGG Orthology K17338; receptor expression-enhancing protein 1/2/3/4
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G42560 : Abscisic acid-responsive (TB2/DP1, HVA22) family protein
RAP-DB (Rice) LOC_Os03g14610.1 : HVA22, putative, expressed
MaizeGDB (Corn) Zm00025a001596 , Zm00025a052873
Brachypodium KQK22553 , PNT77723
Barley HORVU4Hr1G062930.10 , HORVU4Hr1G062930.6 , HORVU4Hr1G062930.4 , HORVU4Hr1G062930.5 , HORVU4Hr1G062930.2 , HORVU4Hr1G062930.3 , HORVU4Hr1G062930.1
Wheat TraesCS4B02G223300 , TraesCS4B02G223300 , TraesCS4D02G223600 , TraesCS4D02G223600 , TraesCS4A02G080700 , TraesCS4A02G080700
Populus -


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cDNA sequences
Sobic.001G435700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G171900 kinesin motor domain containing protein, putative, expressed K10406: kinesin family member C2/C3
2 Sobic.009G163100 kinesin motor domain containing protein, putative, expressed K10403: kinesin family member 22
3 Sobic.008G156600 Leucine Rich Repeat family protein, expressed -
4 Sobic.004G093100 protein kinase family protein, putative, expressed -
5 Sobic.005G020600 Mad3/BUB1 homology region 1 domain containing protein, expressed -
6 Sobic.004G241300 kinesin motor domain containing protein, putative, expressed K10395: kinesin family member 4
7 Sobic.003G376900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed -
8 Sobic.005G050400 syntaxin 6, putative, expressed -
9 Sobic.010G238300 - -
10 Sobic.006G196100 expressed protein -
11 Sobic.001G112600 Actin(PubMedID : 27325899)@protein and mRNA level correlates with dhurrin amount(PubMedID : 12114576)@actin, putative, expressed K10355: actin, other eukaryote
12 Sobic.002G299500 expressed protein -
13 Sobic.004G298200 Plant VAMP (vesicle-associated membrane protein) family protein(PubMedID : 26465154)@MSP domain containing protein, expressed -
14 Sobic.001G385300 auxin-independent growth promoter protein, putative, expressed -
15 Sobic.002G172401 - K07904: Ras-related protein Rab-11A
16 Sobic.010G253600 OsFBL18 - F-box domain and LRR containing protein, expressed -
17 Sobic.010G010201 - -
18 Sobic.002G087200 OsFBX231 - F-box domain containing protein, expressed -
19 Sobic.001G072000 succinate dehydrogenase flavoprotein subunit,mitochondrial precursor, putative, expressed K00234: SDHA, succinate dehydrogenase (ubiquinone) flavoprotein subunit
20 Sobic.004G113600 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L


Gene co-expression network
sample Sobic001G435700 Sobic001G435700 Sobic008G171900 Sobic008G171900 Sobic001G435700--Sobic008G171900 Sobic009G163100 Sobic009G163100 Sobic001G435700--Sobic009G163100 Sobic008G156600 Sobic008G156600 Sobic001G435700--Sobic008G156600 Sobic004G093100 Sobic004G093100 Sobic001G435700--Sobic004G093100 Sobic005G020600 Sobic005G020600 Sobic001G435700--Sobic005G020600 Sobic004G241300 Sobic004G241300 Sobic001G435700--Sobic004G241300 Sobic003G376900 Sobic003G376900 Sobic001G435700--Sobic003G376900 Sobic005G050400 Sobic005G050400 Sobic001G435700--Sobic005G050400 Sobic010G238300 Sobic010G238300 Sobic001G435700--Sobic010G238300 Sobic002G299500 Sobic002G299500 Sobic008G171900--Sobic002G299500 Sobic008G171900--Sobic009G163100 Sobic008G171900--Sobic004G241300 Sobic008G171900--Sobic001G435700 Sobic008G171900--Sobic008G156600 Sobic008G171900--Sobic005G020600 Sobic008G171900--Sobic003G376900 Sobic008G007600 Sobic008G007600 Sobic008G171900--Sobic008G007600 Sobic001G385300 Sobic001G385300 Sobic008G171900--Sobic001G385300 Sobic009G163100--Sobic008G156600 Sobic009G163100--Sobic005G020600 Sobic009G163100--Sobic008G171900 Sobic001G072000 Sobic001G072000 Sobic009G163100--Sobic001G072000 Sobic009G163100--Sobic002G299500 Sobic009G163100--Sobic005G050400 Sobic009G163100--Sobic001G435700 Sobic001G112600 Sobic001G112600 Sobic009G163100--Sobic001G112600 Sobic001G322400 Sobic001G322400 Sobic009G163100--Sobic001G322400 Sobic008G156600--Sobic009G163100 Sobic008G156600--Sobic005G050400 Sobic008G156600--Sobic001G072000 Sobic008G156600--Sobic001G112600 Sobic008G156600--Sobic005G020600 Sobic008G156600--Sobic008G171900 Sobic008G156600--Sobic004G241300 Sobic004G007400 Sobic004G007400 Sobic008G156600--Sobic004G007400 Sobic008G156600--Sobic001G322400 Sobic008G071400 Sobic008G071400 Sobic004G093100--Sobic008G071400 Sobic004G093100--Sobic010G238300 Sobic010G253600 Sobic010G253600 Sobic004G093100--Sobic010G253600 Sobic006G115700 Sobic006G115700 Sobic004G093100--Sobic006G115700 Sobic010G010201 Sobic010G010201 Sobic004G093100--Sobic010G010201 Sobic002G084700 Sobic002G084700 Sobic004G093100--Sobic002G084700 Sobic001G135800 Sobic001G135800 Sobic004G093100--Sobic001G135800 Sobic001G432200 Sobic001G432200 Sobic004G093100--Sobic001G432200 Sobic006G204500 Sobic006G204500 Sobic004G093100--Sobic006G204500 Sobic005G020600--Sobic009G163100 Sobic005G020600--Sobic002G299500 Sobic005G020600--Sobic008G156600 Sobic005G020600--Sobic001G072000 Sobic009G202000 Sobic009G202000 Sobic005G020600--Sobic009G202000 Sobic005G020600--Sobic008G171900 Sobic005G020600--Sobic001G432200 Sobic005G020600--Sobic001G322400 Sobic005G020600--Sobic001G112600 Sobic004G241300--Sobic008G171900 Sobic004G241300--Sobic008G156600 Sobic004G241300--Sobic009G163100 Sobic003G423700 Sobic003G423700 Sobic004G241300--Sobic003G423700 Sobic004G241300--Sobic001G435700 Sobic004G241300--Sobic005G020600 Sobic002G420100 Sobic002G420100 Sobic004G241300--Sobic002G420100 Sobic010G253200 Sobic010G253200 Sobic004G241300--Sobic010G253200 Sobic002G172401 Sobic002G172401 Sobic004G241300--Sobic002G172401 Sobic003G376900--Sobic002G299500 Sobic003G376900--Sobic009G163100 Sobic003G352900 Sobic003G352900 Sobic003G376900--Sobic003G352900 Sobic003G376900--Sobic008G171900 Sobic003G376900--Sobic001G385300 Sobic003G376900--Sobic005G020600 Sobic003G376900--Sobic001G435700 Sobic005G045800 Sobic005G045800 Sobic003G376900--Sobic005G045800 Sobic003G376900--Sobic001G072000 Sobic005G050400--Sobic001G112600 Sobic005G050400--Sobic001G072000 Sobic005G050400--Sobic008G156600 Sobic009G242200 Sobic009G242200 Sobic005G050400--Sobic009G242200 Sobic002G170100 Sobic002G170100 Sobic005G050400--Sobic002G170100 Sobic003G441000 Sobic003G441000 Sobic005G050400--Sobic003G441000 Sobic005G050400--Sobic004G007400 Sobic005G144000 Sobic005G144000 Sobic005G050400--Sobic005G144000 Sobic005G050400--Sobic009G163100 Sobic010G238300--Sobic010G253600 Sobic010G238300--Sobic004G093100 Sobic010G238300--Sobic010G010201 Sobic010G238300--Sobic001G135800 Sobic010G238300--Sobic006G115700 Sobic007G142801 Sobic007G142801 Sobic010G238300--Sobic007G142801 Sobic010G142401 Sobic010G142401 Sobic010G238300--Sobic010G142401 Sobic010G238300--Sobic008G071400 Sobic006G066100 Sobic006G066100 Sobic010G238300--Sobic006G066100
Octagon: transcription factors


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