Gene annotation
Transcriptome id Sobic.008G171900.1
Synonym Sb08g021670
Functional annotation kinesin motor domain containing protein, putative, expressed
UniProt A0A1B6PE86
Pfam PF00225
Panther DB PTHR24115 PTHR24115:SF339
NCBI CDD KOG0239; Kinesin (KAR3 subfamily)
KEGG Orthology K10406; kinesin family member C2/C3
Gene Ontology GO:0008017; microtubule binding GO:0007018microtubule-based movement GO:0005524ATP binding GO:0003777microtubule motor activity GO:0005871kinesin complex


Orthologs (automatic annotation)
TAIR AT1G72250 : Di-glucose binding protein with Kinesin motor domain
RAP-DB (Rice) LOC_Os12g42160.1 : kinesin motor domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a025165 , Zm00025a004706
Brachypodium KQJ85773
Barley HORVU5Hr1G008670.1 , HORVU5Hr1G008670.2 , HORVU5Hr1G008670.3
Wheat TraesCS5A02G032500 , TraesCS5B02G032700 , TraesCS5D02G040800
Populus PNT59846 , PNT59847 , PNT59784 , PNT59848 , PNT59849


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G299500 expressed protein -
2 Sobic.009G163100 kinesin motor domain containing protein, putative, expressed K10403: kinesin family member 22
3 Sobic.004G241300 kinesin motor domain containing protein, putative, expressed K10395: kinesin family member 4
4 Sobic.001G435700 HVA22, putative, expressed K17338: receptor expression-enhancing protein 1/2/3/4
5 Sobic.008G156600 Leucine Rich Repeat family protein, expressed -
6 Sobic.005G020600 Mad3/BUB1 homology region 1 domain containing protein, expressed -
7 Sobic.003G376900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed -
8 Sobic.008G007600 - -
9 Sobic.001G385300 auxin-independent growth promoter protein, putative, expressed -
10 Sobic.004G093100 protein kinase family protein, putative, expressed -
11 Sobic.003G352900 OsFtsH3 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
12 Sobic.004G250800 pre-mRNA-processing factor 31, putative, expressed K12844: U4/U6 small nuclear ribonucleoprotein PRP31
13 Sobic.001G112600 Actin(PubMedID : 27325899)@protein and mRNA level correlates with dhurrin amount(PubMedID : 12114576)@actin, putative, expressed K10355: actin, other eukaryote
14 Sobic.005G050400 syntaxin 6, putative, expressed -
15 Sobic.004G298200 Plant VAMP (vesicle-associated membrane protein) family protein(PubMedID : 26465154)@MSP domain containing protein, expressed -
16 Sobic.006G115700 WRKY35, expressed K18835: WRKY transcription factor 2
17 Sobic.002G364700 ZOS7-11 - C2H2 zinc finger protein, expressed -
18 Sobic.001G072000 succinate dehydrogenase flavoprotein subunit,mitochondrial precursor, putative, expressed K00234: SDHA, succinate dehydrogenase (ubiquinone) flavoprotein subunit
19 Sobic.007G141600 ZOS8-05 - C2H2 zinc finger protein, expressed -
20 Sobic.006G196100 expressed protein -


Gene co-expression network
sample Sobic008G171900 Sobic008G171900 Sobic002G299500 Sobic002G299500 Sobic008G171900--Sobic002G299500 Sobic009G163100 Sobic009G163100 Sobic008G171900--Sobic009G163100 Sobic004G241300 Sobic004G241300 Sobic008G171900--Sobic004G241300 Sobic001G435700 Sobic001G435700 Sobic008G171900--Sobic001G435700 Sobic008G156600 Sobic008G156600 Sobic008G171900--Sobic008G156600 Sobic005G020600 Sobic005G020600 Sobic008G171900--Sobic005G020600 Sobic003G376900 Sobic003G376900 Sobic008G171900--Sobic003G376900 Sobic008G007600 Sobic008G007600 Sobic008G171900--Sobic008G007600 Sobic001G385300 Sobic001G385300 Sobic008G171900--Sobic001G385300 Sobic002G299500--Sobic008G171900 Sobic002G299500--Sobic003G376900 Sobic002G299500--Sobic009G163100 Sobic002G299500--Sobic005G020600 Sobic002G299500--Sobic008G007600 Sobic003G352900 Sobic003G352900 Sobic002G299500--Sobic003G352900 Sobic004G250800 Sobic004G250800 Sobic002G299500--Sobic004G250800 Sobic009G202000 Sobic009G202000 Sobic002G299500--Sobic009G202000 Sobic001G072000 Sobic001G072000 Sobic002G299500--Sobic001G072000 Sobic009G163100--Sobic008G156600 Sobic009G163100--Sobic005G020600 Sobic009G163100--Sobic008G171900 Sobic009G163100--Sobic001G072000 Sobic009G163100--Sobic002G299500 Sobic005G050400 Sobic005G050400 Sobic009G163100--Sobic005G050400 Sobic009G163100--Sobic001G435700 Sobic001G112600 Sobic001G112600 Sobic009G163100--Sobic001G112600 Sobic001G322400 Sobic001G322400 Sobic009G163100--Sobic001G322400 Sobic004G241300--Sobic008G171900 Sobic004G241300--Sobic008G156600 Sobic004G241300--Sobic009G163100 Sobic003G423700 Sobic003G423700 Sobic004G241300--Sobic003G423700 Sobic004G241300--Sobic001G435700 Sobic004G241300--Sobic005G020600 Sobic002G420100 Sobic002G420100 Sobic004G241300--Sobic002G420100 Sobic010G253200 Sobic010G253200 Sobic004G241300--Sobic010G253200 Sobic002G172401 Sobic002G172401 Sobic004G241300--Sobic002G172401 Sobic001G435700--Sobic008G171900 Sobic001G435700--Sobic009G163100 Sobic001G435700--Sobic008G156600 Sobic004G093100 Sobic004G093100 Sobic001G435700--Sobic004G093100 Sobic001G435700--Sobic005G020600 Sobic001G435700--Sobic004G241300 Sobic001G435700--Sobic003G376900 Sobic001G435700--Sobic005G050400 Sobic010G238300 Sobic010G238300 Sobic001G435700--Sobic010G238300 Sobic008G156600--Sobic009G163100 Sobic008G156600--Sobic005G050400 Sobic008G156600--Sobic001G072000 Sobic008G156600--Sobic001G112600 Sobic008G156600--Sobic005G020600 Sobic008G156600--Sobic008G171900 Sobic008G156600--Sobic004G241300 Sobic004G007400 Sobic004G007400 Sobic008G156600--Sobic004G007400 Sobic008G156600--Sobic001G322400 Sobic005G020600--Sobic009G163100 Sobic005G020600--Sobic002G299500 Sobic005G020600--Sobic008G156600 Sobic005G020600--Sobic001G072000 Sobic005G020600--Sobic009G202000 Sobic005G020600--Sobic008G171900 Sobic001G432200 Sobic001G432200 Sobic005G020600--Sobic001G432200 Sobic005G020600--Sobic001G322400 Sobic005G020600--Sobic001G112600 Sobic003G376900--Sobic002G299500 Sobic003G376900--Sobic009G163100 Sobic003G376900--Sobic003G352900 Sobic003G376900--Sobic008G171900 Sobic003G376900--Sobic001G385300 Sobic003G376900--Sobic005G020600 Sobic003G376900--Sobic001G435700 Sobic005G045800 Sobic005G045800 Sobic003G376900--Sobic005G045800 Sobic003G376900--Sobic001G072000 Sobic010G266600 Sobic010G266600 Sobic008G007600--Sobic010G266600 Sobic002G364700 Sobic002G364700 Sobic008G007600--Sobic002G364700 Sobic002G307400 Sobic002G307400 Sobic008G007600--Sobic002G307400 Sobic008G071800 Sobic008G071800 Sobic008G007600--Sobic008G071800 Sobic007G063800 Sobic007G063800 Sobic008G007600--Sobic007G063800 Sobic009G061500 Sobic009G061500 Sobic008G007600--Sobic009G061500 Sobic006G204500 Sobic006G204500 Sobic008G007600--Sobic006G204500 Sobic008G007600--Sobic002G299500 Sobic001G340800 Sobic001G340800 Sobic008G007600--Sobic001G340800 Sobic001G385300--Sobic003G376900 Sobic001G385300--Sobic002G299500 Sobic001G385300--Sobic003G352900 Sobic001G385300--Sobic009G163100 Sobic001G385300--Sobic008G171900 Sobic001G385300--Sobic005G045800 Sobic007G141600 Sobic007G141600 Sobic001G385300--Sobic007G141600 Sobic001G385300--Sobic005G020600 Sobic004G298600 Sobic004G298600 Sobic001G385300--Sobic004G298600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.