Gene annotation
Transcriptome id Sobic.006G196100.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6PMW4
Pfam -
Panther DB PTHR36478 PTHR36478:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g10030.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G115700 WRKY35, expressed K18835: WRKY transcription factor 2
2 Sobic.004G093100 protein kinase family protein, putative, expressed -
3 Sobic.004G250800 pre-mRNA-processing factor 31, putative, expressed K12844: U4/U6 small nuclear ribonucleoprotein PRP31
4 Sobic.002G299500 expressed protein -
5 Sobic.004G062200 expressed protein -
6 Sobic.006G171600 ZOS4-10 - C2H2 zinc finger protein, expressed -
7 Sobic.002G364700 ZOS7-11 - C2H2 zinc finger protein, expressed -
8 Sobic.003G376900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed -
9 Sobic.005G050400 syntaxin 6, putative, expressed -
10 Sobic.009G163100 kinesin motor domain containing protein, putative, expressed K10403: kinesin family member 22
11 Sobic.009G242200 CGMC_MAPKCMGC_2.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
12 Sobic.001G112600 Actin(PubMedID : 27325899)@protein and mRNA level correlates with dhurrin amount(PubMedID : 12114576)@actin, putative, expressed K10355: actin, other eukaryote
13 Sobic.001G039100 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
14 Sobic.001G135800 pentatricopeptide, putative, expressed -
15 Sobic.001G435700 HVA22, putative, expressed K17338: receptor expression-enhancing protein 1/2/3/4
16 Sobic.010G238300 - -
17 Sobic.008G071400 no apical meristem protein, putative, expressed -
18 Sobic.004G279200 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase
19 Sobic.006G066100 conserved hypothetical protein -
20 Sobic.001G432200 pleckstrin homology domain-containing protein-related taxo, putative, expressed -


Gene co-expression network
sample Sobic006G196100 Sobic006G196100 Sobic006G115700 Sobic006G115700 Sobic006G196100--Sobic006G115700 Sobic004G093100 Sobic004G093100 Sobic006G196100--Sobic004G093100 Sobic004G250800 Sobic004G250800 Sobic006G196100--Sobic004G250800 Sobic002G299500 Sobic002G299500 Sobic006G196100--Sobic002G299500 Sobic004G062200 Sobic004G062200 Sobic006G196100--Sobic004G062200 Sobic006G171600 Sobic006G171600 Sobic006G196100--Sobic006G171600 Sobic002G364700 Sobic002G364700 Sobic006G196100--Sobic002G364700 Sobic003G376900 Sobic003G376900 Sobic006G196100--Sobic003G376900 Sobic005G050400 Sobic005G050400 Sobic006G196100--Sobic005G050400 Sobic003G297100 Sobic003G297100 Sobic006G115700--Sobic003G297100 Sobic007G142801 Sobic007G142801 Sobic006G115700--Sobic007G142801 Sobic001G135800 Sobic001G135800 Sobic006G115700--Sobic001G135800 Sobic006G115700--Sobic002G364700 Sobic009G061601 Sobic009G061601 Sobic006G115700--Sobic009G061601 Sobic001G432200 Sobic001G432200 Sobic006G115700--Sobic001G432200 Sobic005G176700 Sobic005G176700 Sobic006G115700--Sobic005G176700 Sobic006G204500 Sobic006G204500 Sobic006G115700--Sobic006G204500 Sobic001G370400 Sobic001G370400 Sobic006G115700--Sobic001G370400 Sobic008G071400 Sobic008G071400 Sobic004G093100--Sobic008G071400 Sobic010G238300 Sobic010G238300 Sobic004G093100--Sobic010G238300 Sobic010G253600 Sobic010G253600 Sobic004G093100--Sobic010G253600 Sobic004G093100--Sobic006G115700 Sobic010G010201 Sobic010G010201 Sobic004G093100--Sobic010G010201 Sobic002G084700 Sobic002G084700 Sobic004G093100--Sobic002G084700 Sobic004G093100--Sobic001G135800 Sobic004G093100--Sobic001G432200 Sobic004G093100--Sobic006G204500 Sobic004G250800--Sobic006G115700 Sobic004G250800--Sobic006G171600 Sobic008G007600 Sobic008G007600 Sobic004G250800--Sobic008G007600 Sobic004G250800--Sobic002G364700 Sobic004G250800--Sobic002G299500 Sobic009G061500 Sobic009G061500 Sobic004G250800--Sobic009G061500 Sobic008G165401 Sobic008G165401 Sobic004G250800--Sobic008G165401 Sobic002G307400 Sobic002G307400 Sobic004G250800--Sobic002G307400 Sobic004G250800--Sobic001G135800 Sobic008G171900 Sobic008G171900 Sobic002G299500--Sobic008G171900 Sobic002G299500--Sobic003G376900 Sobic009G163100 Sobic009G163100 Sobic002G299500--Sobic009G163100 Sobic005G020600 Sobic005G020600 Sobic002G299500--Sobic005G020600 Sobic002G299500--Sobic008G007600 Sobic003G352900 Sobic003G352900 Sobic002G299500--Sobic003G352900 Sobic002G299500--Sobic004G250800 Sobic009G202000 Sobic009G202000 Sobic002G299500--Sobic009G202000 Sobic001G072000 Sobic001G072000 Sobic002G299500--Sobic001G072000 Sobic004G062200--Sobic006G171600 Sobic004G279200 Sobic004G279200 Sobic004G062200--Sobic004G279200 Sobic004G062200--Sobic001G072000 Sobic001G112600 Sobic001G112600 Sobic004G062200--Sobic001G112600 Sobic006G070564 Sobic006G070564 Sobic004G062200--Sobic006G070564 Sobic010G052900 Sobic010G052900 Sobic004G062200--Sobic010G052900 Sobic004G062200--Sobic005G050400 Sobic004G062200--Sobic006G115700 Sobic007G063800 Sobic007G063800 Sobic004G062200--Sobic007G063800 Sobic006G171600--Sobic006G115700 Sobic010G142650 Sobic010G142650 Sobic006G171600--Sobic010G142650 Sobic009G242200 Sobic009G242200 Sobic006G171600--Sobic009G242200 Sobic004G290600 Sobic004G290600 Sobic006G171600--Sobic004G290600 Sobic006G171600--Sobic006G204500 Sobic010G003200 Sobic010G003200 Sobic006G171600--Sobic010G003200 Sobic006G171600--Sobic003G297100 Sobic002G340600 Sobic002G340600 Sobic006G171600--Sobic002G340600 Sobic006G171600--Sobic002G364700 Sobic002G364700--Sobic006G204500 Sobic002G364700--Sobic005G176700 Sobic002G364700--Sobic001G370400 Sobic002G364700--Sobic006G115700 Sobic008G020800 Sobic008G020800 Sobic002G364700--Sobic008G020800 Sobic002G364700--Sobic002G307400 Sobic004G100300 Sobic004G100300 Sobic002G364700--Sobic004G100300 Sobic003G070400 Sobic003G070400 Sobic002G364700--Sobic003G070400 Sobic006G070032 Sobic006G070032 Sobic002G364700--Sobic006G070032 Sobic003G376900--Sobic002G299500 Sobic003G376900--Sobic009G163100 Sobic003G376900--Sobic003G352900 Sobic003G376900--Sobic008G171900 Sobic001G385300 Sobic001G385300 Sobic003G376900--Sobic001G385300 Sobic003G376900--Sobic005G020600 Sobic001G435700 Sobic001G435700 Sobic003G376900--Sobic001G435700 Sobic005G045800 Sobic005G045800 Sobic003G376900--Sobic005G045800 Sobic003G376900--Sobic001G072000 Sobic005G050400--Sobic001G112600 Sobic005G050400--Sobic001G072000 Sobic008G156600 Sobic008G156600 Sobic005G050400--Sobic008G156600 Sobic005G050400--Sobic009G242200 Sobic002G170100 Sobic002G170100 Sobic005G050400--Sobic002G170100 Sobic003G441000 Sobic003G441000 Sobic005G050400--Sobic003G441000 Sobic004G007400 Sobic004G007400 Sobic005G050400--Sobic004G007400 Sobic005G144000 Sobic005G144000 Sobic005G050400--Sobic005G144000 Sobic005G050400--Sobic009G163100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.