Gene annotation
Transcriptome id Sobic.008G071400.1
Synonym ATCUC2, ANAC098, CUC2, Sb08g006330
Functional annotation no apical meristem protein, putative, expressed
UniProt A0A1B6PC53
Pfam PF02365
Panther DB PTHR31744 PTHR31744:SF22
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT5G53950 : NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
RAP-DB (Rice) LOC_Os06g23650.1 : no apical meristem protein, putative, expressed
MaizeGDB (Corn) Zm00025a049194 , Zm00025a002284 , Zm00025a025662 , Zm00025a031741 , Zm00025a013388 , Zm00025a022545 , Zm00025a049186 , Zm00025a030255 , Zm00025a032846 , Zm00025a047952 , Zm00025a040616 , Zm00025a051844 , Zm00025a035399 , Zm00025a032018 , Zm00025a047504 , Zm00025a005111 , Zm00025a017294 , Zm00025a025343 , Zm00025a056131 , Zm00025a020814 , Zm00025a052457 , Zm00025a026546 , Zm00025a047596 , Zm00025a045432 , Zm00025a009747 , Zm00025a003461 , Zm00025a052463 , Zm00025a010699 , Zm00025a007386 , Zm00025a054832 , Zm00025a056511
Brachypodium KQK00031 , KQK00032 , KQK00033 , KQK14591 , PNT75915 , PNT68893 , KQK02753 , KQJ82980 , KQJ90847 , KQK19730 , KQK18325 , KQJ85858 , KQK20318 , KQK06182 , KQK10307 , KQK15684 , KQK15686 , KQK15688 , KQJ84638 , KQJ83573 , KQJ95448 , PNT74415 , PNT71229 , KQJ82981 , KQK21869 , KQK14132 , KQJ82828 , PNT76596 , KQK15122
Barley HORVU5Hr1G087840.10 , HORVU2Hr1G017470.1 , HORVU2Hr1G017470.3 , HORVU2Hr1G017470.2 , HORVU2Hr1G017470.4 , HORVU2Hr1G017470.7 , HORVU2Hr1G017470.9 , HORVU2Hr1G017470.8 , HORVU2Hr1G017370.6 , HORVU6Hr1G015950.1 , HORVU2Hr1G017370.4 , HORVU2Hr1G017370.5 , HORVU2Hr1G017370.2 , HORVU2Hr1G017370.3 , HORVU2Hr1G017370.1 , HORVU3Hr1G094170.1 , HORVU2Hr1G017350.8 , HORVU2Hr1G017350.9 , HORVU0Hr1G017490.7 , HORVU2Hr1G017350.1 , HORVU2Hr1G017350.2 , HORVU2Hr1G017350.3 , HORVU2Hr1G017350.4 , HORVU2Hr1G017350.5 , HORVU2Hr1G017350.6 , HORVU2Hr1G017350.7 , HORVU2Hr1G080460.14 , HORVU2Hr1G080460.15 , HORVU2Hr1G080460.17 , HORVU2Hr1G080460.10 , HORVU2Hr1G080460.11 , HORVU2Hr1G080460.12 , HORVU2Hr1G080460.13 , HORVU2Hr1G080460.18 , HORVU2Hr1G080460.19 , HORVU7Hr1G012760.10 , HORVU2Hr1G077320.2 , HORVU2Hr1G077320.1 , HORVU0Hr1G017490.4 , HORVU5Hr1G074810.3 , HORVU5Hr1G074810.2 , HORVU5Hr1G074810.1 , HORVU5Hr1G074810.6 , HORVU5Hr1G074810.5 , HORVU5Hr1G074810.4 , HORVU0Hr1G017490.6 , HORVU7Hr1G072670.9 , HORVU7Hr1G072670.8 , HORVU2Hr1G017400.1 , HORVU2Hr1G017400.2 , HORVU2Hr1G017400.3 , HORVU2Hr1G017400.4 , HORVU2Hr1G017400.5 , HORVU2Hr1G017400.6 , HORVU2Hr1G017400.7 , HORVU2Hr1G080460.8 , HORVU2Hr1G080460.6 , HORVU2Hr1G080460.7 , HORVU2Hr1G080460.4 , HORVU2Hr1G080460.5 , HORVU2Hr1G080460.2 , HORVU2Hr1G080460.3 , HORVU2Hr1G080460.1 , HORVU2Hr1G089210.6 , HORVU7Hr1G082420.1 , HORVU7Hr1G082420.3 , HORVU7Hr1G082420.2 , HORVU7Hr1G082420.4 , HORVU7Hr1G012760.3 , HORVU7Hr1G012760.2 , HORVU7Hr1G012760.7 , HORVU7Hr1G012760.6 , HORVU7Hr1G012760.5 , HORVU7Hr1G012760.4 , HORVU7Hr1G012760.9 , HORVU7Hr1G012760.8 , HORVU2Hr1G103930.2 , HORVU2Hr1G103930.3 , HORVU2Hr1G103930.1 , HORVU2Hr1G103930.6 , HORVU2Hr1G103930.7 , HORVU2Hr1G103930.4 , HORVU2Hr1G103930.5 , HORVU2Hr1G103930.8 , HORVU2Hr1G103930.9 , HORVU2Hr1G080460.21 , HORVU2Hr1G080460.20 , HORVU0Hr1G028970.1 , HORVU6Hr1G019380.3 , HORVU6Hr1G019380.2 , HORVU2Hr1G017380.1 , HORVU0Hr1G026330.5 , HORVU0Hr1G026330.1 , HORVU0Hr1G026330.2 , HORVU7Hr1G072670.3 , HORVU7Hr1G072670.2 , HORVU7Hr1G072670.1 , HORVU7Hr1G072670.7 , HORVU7Hr1G072670.6 , HORVU7Hr1G072670.5 , HORVU7Hr1G072670.4 , HORVU4Hr1G051290.7 , HORVU4Hr1G051290.1 , HORVU7Hr1G072670.11 , HORVU7Hr1G072670.10 , HORVU2Hr1G004130.1 , HORVU1Hr1G021800.2 , HORVU1Hr1G021800.3 , HORVU1Hr1G021800.1 , HORVU2Hr1G017470.15 , HORVU2Hr1G017470.14 , HORVU2Hr1G017470.11 , HORVU2Hr1G017470.10 , HORVU2Hr1G017470.13 , HORVU2Hr1G017470.12 , HORVU0Hr1G017490.8 , HORVU0Hr1G017490.1 , HORVU0Hr1G017490.2 , HORVU0Hr1G017490.5 , HORVU4Hr1G012030.1 , HORVU4Hr1G012030.2 , HORVU7Hr1G012740.1 , HORVU2Hr1G017370.7 , HORVU2Hr1G017460.10 , HORVU2Hr1G089210.4 , HORVU2Hr1G089210.5 , HORVU2Hr1G089210.2 , HORVU2Hr1G089210.3 , HORVU2Hr1G089210.1 , HORVU7Hr1G122680.1 , HORVU7Hr1G122680.2 , HORVU7Hr1G122680.3 , HORVU2Hr1G017460.8 , HORVU2Hr1G017460.9 , HORVU2Hr1G017460.2 , HORVU2Hr1G017460.6 , HORVU2Hr1G017460.7 , HORVU2Hr1G017460.4 , HORVU2Hr1G017460.5 , HORVU5Hr1G087840.8 , HORVU5Hr1G087840.9 , HORVU5Hr1G087840.3 , HORVU5Hr1G087840.4 , HORVU5Hr1G087840.5
Wheat TraesCS5B02G275200 , TraesCS5A02G275900 , TraesCS2B02G119000 , TraesCS6D02G362800 , TraesCS3B02G194000 , TraesCS2B02G343600 , TraesCS5A02G049100 , TraesCS5A02G049100 , TraesCS1D02G263800 , TraesCS3B02G439600 , TraesCS7D02G063300 , TraesCS7B02G489500 , TraesCS7B02G489500 , TraesCS2D02G101300 , TraesCS2A02G311500 , TraesCS2B02G228900 , TraesCS2B02G228900 , TraesCS4A02G421200 , TraesCS7D02G246100 , TraesCS7B02G205600 , TraesCS5A02G245900 , TraesCS5A02G245900 , TraesCS2D02G100600 , TraesCS6A02G108300 , TraesCS7D02G342300 , TraesCS6A02G108300 , TraesCS5D02G360700 , TraesCS2A02G462500 , TraesCS2B02G118300 , TraesCS4B02G173600 , TraesCS2D02G100700 , TraesCS2D02G100700 , TraesCS7A02G569100 , TraesCS7A02G569100 , TraesCS4D02G175700 , TraesCS2D02G100800 , TraesCS5D02G283200 , TraesCS7A02G569300 , TraesCS7B02G246300 , TraesCS7D02G302000 , TraesCS3D02G401200 , TraesCS4A02G420200 , TraesCS2D02G378800 , TraesCS2D02G378800 , TraesCS2A02G201800 , TraesCS2A02G201800 , TraesCS2A02G101900 , TraesCS2B02G119100 , TraesCS7B02G143900 , TraesCS3A02G406000 , TraesCS2A02G101000 , TraesCS2A02G101000 , TraesCS7A02G334800 , TraesCS7D02G062600 , TraesCS2D02G101400 , TraesCS7A02G247600 , TraesCS2B02G118500 , TraesCS1D02G194200 , TraesCS1D02G194200 , TraesCS7A02G305200 , TraesCS4A02G131000 , TraesCS4B02G072400 , TraesCS2B02G484100 , TraesCS2A02G102000 , TraesCS2B02G118200 , TraesCS2D02G462900 , TraesCS7D02G322700 , TraesCS4A02G242700 , TraesCS6A02G378500 , TraesCS2A02G382400 , TraesCS2A02G382400 , TraesCS2A02G101100 , TraesCS4D02G071200 , TraesCS2D02G324700 , TraesCS3A02G162900 , TraesCS2D02G214100 , TraesCS7B02G094000 , TraesCS1B02G192200 , TraesCS1B02G192200 , TraesCS5B02G054200 , TraesCS5B02G054200 , TraesCS5D02G059700 , TraesCS5D02G059700 , TraesCS2B02G399700 , TraesCS2B02G399700 , TraesCS2B02G118400 , TraesCS2A02G101200 , TraesCS2D02G100900 , TraesCS1A02G263700 , TraesCS3D02G170000 , TraesCS6D02G096300 , TraesCS7B02G226600 , TraesCS2A02G338300 , TraesCS4A02G499900 , TraesCS4A02G499900 , TraesCS2A02G101400 , TraesCS6B02G416300 , TraesCS7D02G189900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G084700 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
2 Sobic.008G057800 methyltransferase, putative, expressed -
3 Sobic.009G167201 - -
4 Sobic.004G136100 - -
5 Sobic.004G080800 EF hand family protein, putative, expressed K13448: calcium-binding protein CML
6 Sobic.006G173400 actin-depolymerizing factor, putative, expressed K05765: cofilin
7 Sobic.004G093100 protein kinase family protein, putative, expressed -
8 Sobic.006G234400 DUF617 domain containing protein, expressed -
9 Sobic.002G225800 paramyosin, putative, expressed -
10 Sobic.003G147700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
11 Sobic.002G128700 expressed protein -
12 Sobic.010G190500 - -
13 Sobic.005G000200 lipase, putative, expressed -
14 Sobic.001G539820 - -
15 Sobic.003G114800 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
16 Sobic.005G009700 expressed protein -
17 Sobic.001G068000 - -
18 Sobic.004G091000 pectate lyase precursor, putative, expressed K01728: pectate lyase
19 Sobic.007G103000 FGGY family of carbohydrate kinases, putative, expressed K00864: glpK, glycerol kinase
20 Sobic.007G134260 - -


Gene co-expression network
sample Sobic008G071400 Sobic008G071400 Sobic002G084700 Sobic002G084700 Sobic008G071400--Sobic002G084700 Sobic008G057800 Sobic008G057800 Sobic008G071400--Sobic008G057800 Sobic009G167201 Sobic009G167201 Sobic008G071400--Sobic009G167201 Sobic004G136100 Sobic004G136100 Sobic008G071400--Sobic004G136100 Sobic004G080800 Sobic004G080800 Sobic008G071400--Sobic004G080800 Sobic006G173400 Sobic006G173400 Sobic008G071400--Sobic006G173400 Sobic004G093100 Sobic004G093100 Sobic008G071400--Sobic004G093100 Sobic006G234400 Sobic006G234400 Sobic008G071400--Sobic006G234400 Sobic002G225800 Sobic002G225800 Sobic008G071400--Sobic002G225800 Sobic002G084700--Sobic008G057800 Sobic002G084700--Sobic008G071400 Sobic004G080000 Sobic004G080000 Sobic002G084700--Sobic004G080000 Sobic010G176400 Sobic010G176400 Sobic002G084700--Sobic010G176400 Sobic003G329600 Sobic003G329600 Sobic002G084700--Sobic003G329600 Sobic009G145750 Sobic009G145750 Sobic002G084700--Sobic009G145750 Sobic002G084700--Sobic009G167201 Sobic010G089900 Sobic010G089900 Sobic002G084700--Sobic010G089900 Sobic001G068000 Sobic001G068000 Sobic002G084700--Sobic001G068000 Sobic008G011901 Sobic008G011901 Sobic008G057800--Sobic008G011901 Sobic008G097800 Sobic008G097800 Sobic008G057800--Sobic008G097800 Sobic002G145400 Sobic002G145400 Sobic008G057800--Sobic002G145400 Sobic004G024800 Sobic004G024800 Sobic008G057800--Sobic004G024800 Sobic005G035200 Sobic005G035200 Sobic008G057800--Sobic005G035200 Sobic007G221932 Sobic007G221932 Sobic008G057800--Sobic007G221932 Sobic007G080100 Sobic007G080100 Sobic008G057800--Sobic007G080100 Sobic003G195400 Sobic003G195400 Sobic008G057800--Sobic003G195400 Sobic001G539880 Sobic001G539880 Sobic008G057800--Sobic001G539880 Sobic009G166000 Sobic009G166000 Sobic009G167201--Sobic009G166000 Sobic010G177600 Sobic010G177600 Sobic009G167201--Sobic010G177600 Sobic004G331500 Sobic004G331500 Sobic009G167201--Sobic004G331500 Sobic008G075800 Sobic008G075800 Sobic009G167201--Sobic008G075800 Sobic007G061800 Sobic007G061800 Sobic009G167201--Sobic007G061800 Sobic001G222800 Sobic001G222800 Sobic009G167201--Sobic001G222800 Sobic009G165900 Sobic009G165900 Sobic009G167201--Sobic009G165900 Sobic004G287200 Sobic004G287200 Sobic009G167201--Sobic004G287200 Sobic010G118800 Sobic010G118800 Sobic009G167201--Sobic010G118800 Sobic006G237700 Sobic006G237700 Sobic004G136100--Sobic006G237700 Sobic002G283000 Sobic002G283000 Sobic004G136100--Sobic002G283000 Sobic009G089532 Sobic009G089532 Sobic004G136100--Sobic009G089532 Sobic009G096700 Sobic009G096700 Sobic004G136100--Sobic009G096700 Sobic002G091200 Sobic002G091200 Sobic004G136100--Sobic002G091200 Sobic009G098900 Sobic009G098900 Sobic004G136100--Sobic009G098900 Sobic001G539700 Sobic001G539700 Sobic004G136100--Sobic001G539700 Sobic008G028100 Sobic008G028100 Sobic004G136100--Sobic008G028100 Sobic010G252600 Sobic010G252600 Sobic004G136100--Sobic010G252600 Sobic010G140100 Sobic010G140100 Sobic004G080800--Sobic010G140100 Sobic010G271600 Sobic010G271600 Sobic004G080800--Sobic010G271600 Sobic009G098400 Sobic009G098400 Sobic004G080800--Sobic009G098400 Sobic004G080800--Sobic006G173400 Sobic004G187400 Sobic004G187400 Sobic004G080800--Sobic004G187400 Sobic010G190500 Sobic010G190500 Sobic004G080800--Sobic010G190500 Sobic010G257800 Sobic010G257800 Sobic004G080800--Sobic010G257800 Sobic002G061300 Sobic002G061300 Sobic004G080800--Sobic002G061300 Sobic005G214700 Sobic005G214700 Sobic004G080800--Sobic005G214700 Sobic003G114800 Sobic003G114800 Sobic006G173400--Sobic003G114800 Sobic004G091000 Sobic004G091000 Sobic006G173400--Sobic004G091000 Sobic005G000200 Sobic005G000200 Sobic006G173400--Sobic005G000200 Sobic002G128700 Sobic002G128700 Sobic006G173400--Sobic002G128700 Sobic008G102850 Sobic008G102850 Sobic006G173400--Sobic008G102850 Sobic008G079200 Sobic008G079200 Sobic006G173400--Sobic008G079200 Sobic003G147700 Sobic003G147700 Sobic006G173400--Sobic003G147700 Sobic007G103000 Sobic007G103000 Sobic006G173400--Sobic007G103000 Sobic005G065300 Sobic005G065300 Sobic006G173400--Sobic005G065300 Sobic004G093100--Sobic008G071400 Sobic010G238300 Sobic010G238300 Sobic004G093100--Sobic010G238300 Sobic010G253600 Sobic010G253600 Sobic004G093100--Sobic010G253600 Sobic006G115700 Sobic006G115700 Sobic004G093100--Sobic006G115700 Sobic010G010201 Sobic010G010201 Sobic004G093100--Sobic010G010201 Sobic004G093100--Sobic002G084700 Sobic001G135800 Sobic001G135800 Sobic004G093100--Sobic001G135800 Sobic001G432200 Sobic001G432200 Sobic004G093100--Sobic001G432200 Sobic006G204500 Sobic006G204500 Sobic004G093100--Sobic006G204500 Sobic006G234400--Sobic007G061800 Sobic001G400400 Sobic001G400400 Sobic006G234400--Sobic001G400400 Sobic006G234400--Sobic001G222800 Sobic010G034200 Sobic010G034200 Sobic006G234400--Sobic010G034200 Sobic003G197500 Sobic003G197500 Sobic006G234400--Sobic003G197500 Sobic009G253700 Sobic009G253700 Sobic006G234400--Sobic009G253700 Sobic009G227500 Sobic009G227500 Sobic006G234400--Sobic009G227500 Sobic006G234400--Sobic006G173400 Sobic006G234400--Sobic010G177600 Sobic007G148233 Sobic007G148233 Sobic002G225800--Sobic007G148233 Sobic002G225800--Sobic003G195400 Sobic002G225800--Sobic001G539880 Sobic005G035250 Sobic005G035250 Sobic002G225800--Sobic005G035250 Sobic005G009700 Sobic005G009700 Sobic002G225800--Sobic005G009700 Sobic001G539820 Sobic001G539820 Sobic002G225800--Sobic001G539820 Sobic002G225800--Sobic002G128700 Sobic007G222700 Sobic007G222700 Sobic002G225800--Sobic007G222700 Sobic004G158100 Sobic004G158100 Sobic002G225800--Sobic004G158100
Octagon: transcription factors


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