Gene annotation
Transcriptome id Sobic.002G084700.1
Synonym Sb02g007050
Functional annotation glucan endo-1,3-beta-glucosidase precursor, putative, expressed
UniProt A0A1B6QA13
Pfam PF00332
Panther DB PTHR32227 PTHR32227:SF92
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G24318 : O-Glycosyl hydrolases family 17 protein
RAP-DB (Rice) LOC_Os07g13580.1 : glucan endo-1,3-beta-glucosidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a011515 , Zm00025a031488 , Zm00025a001555 , Zm00025a045468
Brachypodium KQK20290 , KQJ99728
Barley HORVU2Hr1G072890.8 , HORVU2Hr1G072890.9 , HORVU2Hr1G072890.2 , HORVU2Hr1G072890.3 , HORVU2Hr1G072890.1 , HORVU2Hr1G072890.6 , HORVU2Hr1G072890.7 , HORVU2Hr1G072890.4 , HORVU2Hr1G072890.5 , HORVU3Hr1G067280.8 , HORVU3Hr1G067280.9 , HORVU3Hr1G067280.1 , HORVU3Hr1G067280.3 , HORVU3Hr1G067280.4 , HORVU3Hr1G067280.5 , HORVU3Hr1G067280.6 , HORVU3Hr1G067280.7 , HORVU3Hr1G067280.10 , HORVU3Hr1G067280.11 , HORVU3Hr1G067280.2 , HORVU2Hr1G072890.10 , HORVU2Hr1G072890.11
Wheat TraesCS3D02G249500 , TraesCS3D02G249500 , TraesCS3B02G278400 , TraesCS2B02G311200 , TraesCS2B02G311200 , TraesCSU02G239400 , TraesCS2A02G294700 , TraesCS2A02G294700 , TraesCSU02G204400 , TraesCS2D02G292500 , TraesCS2D02G292500 , TraesCS3A02G249500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G057800 methyltransferase, putative, expressed -
2 Sobic.008G071400 no apical meristem protein, putative, expressed -
3 Sobic.004G080000 polygalacturonase, putative, expressed K01213: galacturan 1,4-alpha-galacturonidase
4 Sobic.010G176400 pectate lyase precursor, putative, expressed K01728: pectate lyase
5 Sobic.003G329600 CAMK_CAMK_like.10 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
6 Sobic.009G145750 - -
7 Sobic.009G167201 - -
8 Sobic.010G089900 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
9 Sobic.001G068000 - -
10 Sobic.007G146300 pectinesterase, putative, expressed -
11 Sobic.003G255400 glyoxal oxidase-related, putative, expressed -
12 Sobic.004G041800 expressed protein -
13 Sobic.001G466100 glycosyl hydrolase family 10 protein, putative, expressed -
14 Sobic.008G099000 protein of unknown function domain containing protein, expressed -
15 Sobic.006G105500 pectinesterase, putative, expressed -
16 Sobic.010G141001 - -
17 Sobic.001G539600 expansin precursor, putative, expressed -
18 Sobic.004G222400 DEF7 - Defensin and Defensin-like DEFL family, expressed -
19 Sobic.009G091000 TKL_IRAK_CrRLK1L-1.11 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
20 Sobic.008G181900 OsFBLD9 - F-box, LRR and FBD domain containing protein, expressed -


Gene co-expression network
sample Sobic002G084700 Sobic002G084700 Sobic008G057800 Sobic008G057800 Sobic002G084700--Sobic008G057800 Sobic008G071400 Sobic008G071400 Sobic002G084700--Sobic008G071400 Sobic004G080000 Sobic004G080000 Sobic002G084700--Sobic004G080000 Sobic010G176400 Sobic010G176400 Sobic002G084700--Sobic010G176400 Sobic003G329600 Sobic003G329600 Sobic002G084700--Sobic003G329600 Sobic009G145750 Sobic009G145750 Sobic002G084700--Sobic009G145750 Sobic009G167201 Sobic009G167201 Sobic002G084700--Sobic009G167201 Sobic010G089900 Sobic010G089900 Sobic002G084700--Sobic010G089900 Sobic001G068000 Sobic001G068000 Sobic002G084700--Sobic001G068000 Sobic008G011901 Sobic008G011901 Sobic008G057800--Sobic008G011901 Sobic008G097800 Sobic008G097800 Sobic008G057800--Sobic008G097800 Sobic002G145400 Sobic002G145400 Sobic008G057800--Sobic002G145400 Sobic004G024800 Sobic004G024800 Sobic008G057800--Sobic004G024800 Sobic005G035200 Sobic005G035200 Sobic008G057800--Sobic005G035200 Sobic007G221932 Sobic007G221932 Sobic008G057800--Sobic007G221932 Sobic007G080100 Sobic007G080100 Sobic008G057800--Sobic007G080100 Sobic003G195400 Sobic003G195400 Sobic008G057800--Sobic003G195400 Sobic001G539880 Sobic001G539880 Sobic008G057800--Sobic001G539880 Sobic008G071400--Sobic002G084700 Sobic008G071400--Sobic008G057800 Sobic008G071400--Sobic009G167201 Sobic004G136100 Sobic004G136100 Sobic008G071400--Sobic004G136100 Sobic004G080800 Sobic004G080800 Sobic008G071400--Sobic004G080800 Sobic006G173400 Sobic006G173400 Sobic008G071400--Sobic006G173400 Sobic004G093100 Sobic004G093100 Sobic008G071400--Sobic004G093100 Sobic006G234400 Sobic006G234400 Sobic008G071400--Sobic006G234400 Sobic002G225800 Sobic002G225800 Sobic008G071400--Sobic002G225800 Sobic004G041800 Sobic004G041800 Sobic004G080000--Sobic004G041800 Sobic007G146300 Sobic007G146300 Sobic004G080000--Sobic007G146300 Sobic001G466100 Sobic001G466100 Sobic004G080000--Sobic001G466100 Sobic010G276200 Sobic010G276200 Sobic004G080000--Sobic010G276200 Sobic005G023600 Sobic005G023600 Sobic004G080000--Sobic005G023600 Sobic005G209300 Sobic005G209300 Sobic004G080000--Sobic005G209300 Sobic004G080000--Sobic010G176400 Sobic004G123100 Sobic004G123100 Sobic004G080000--Sobic004G123100 Sobic004G080000--Sobic003G329600 Sobic010G176400--Sobic003G329600 Sobic010G141001 Sobic010G141001 Sobic010G176400--Sobic010G141001 Sobic003G255400 Sobic003G255400 Sobic010G176400--Sobic003G255400 Sobic004G222400 Sobic004G222400 Sobic010G176400--Sobic004G222400 Sobic001G539600 Sobic001G539600 Sobic010G176400--Sobic001G539600 Sobic008G099000 Sobic008G099000 Sobic010G176400--Sobic008G099000 Sobic010G176400--Sobic010G089900 Sobic010G176400--Sobic001G466100 Sobic002G273200 Sobic002G273200 Sobic010G176400--Sobic002G273200 Sobic003G329600--Sobic010G176400 Sobic003G329600--Sobic003G255400 Sobic003G329600--Sobic010G141001 Sobic003G329600--Sobic001G539600 Sobic003G329600--Sobic004G222400 Sobic003G329600--Sobic010G089900 Sobic003G329600--Sobic008G099000 Sobic003G329600--Sobic002G273200 Sobic003G329600--Sobic001G466100 Sobic007G166500 Sobic007G166500 Sobic009G145750--Sobic007G166500 Sobic002G029000 Sobic002G029000 Sobic009G145750--Sobic002G029000 Sobic009G145750--Sobic007G146300 Sobic009G145750--Sobic005G209300 Sobic002G323200 Sobic002G323200 Sobic009G145750--Sobic002G323200 Sobic009G145750--Sobic004G080000 Sobic003G434100 Sobic003G434100 Sobic009G145750--Sobic003G434100 Sobic009G145750--Sobic004G041800 Sobic005G181500 Sobic005G181500 Sobic009G145750--Sobic005G181500 Sobic009G166000 Sobic009G166000 Sobic009G167201--Sobic009G166000 Sobic010G177600 Sobic010G177600 Sobic009G167201--Sobic010G177600 Sobic004G331500 Sobic004G331500 Sobic009G167201--Sobic004G331500 Sobic008G075800 Sobic008G075800 Sobic009G167201--Sobic008G075800 Sobic007G061800 Sobic007G061800 Sobic009G167201--Sobic007G061800 Sobic001G222800 Sobic001G222800 Sobic009G167201--Sobic001G222800 Sobic009G165900 Sobic009G165900 Sobic009G167201--Sobic009G165900 Sobic004G287200 Sobic004G287200 Sobic009G167201--Sobic004G287200 Sobic010G118800 Sobic010G118800 Sobic009G167201--Sobic010G118800 Sobic010G089900--Sobic003G329600 Sobic010G089900--Sobic001G539600 Sobic010G089900--Sobic010G176400 Sobic010G089900--Sobic003G255400 Sobic001G539940 Sobic001G539940 Sobic010G089900--Sobic001G539940 Sobic002G224000 Sobic002G224000 Sobic010G089900--Sobic002G224000 Sobic010G151575 Sobic010G151575 Sobic010G089900--Sobic010G151575 Sobic006G105500 Sobic006G105500 Sobic010G089900--Sobic006G105500 Sobic010G089900--Sobic002G273200 Sobic005G023400 Sobic005G023400 Sobic001G068000--Sobic005G023400 Sobic001G068000--Sobic008G057800 Sobic001G068000--Sobic004G024800 Sobic001G068000--Sobic008G011901 Sobic001G068000--Sobic007G221932 Sobic001G068000--Sobic008G097800 Sobic001G068000--Sobic007G080100 Sobic002G323000 Sobic002G323000 Sobic001G068000--Sobic002G323000 Sobic001G068000--Sobic002G145400
Octagon: transcription factors


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