Gene annotation
Transcriptome id Sobic.007G141600.1,Sobic.007G141600.2
Synonym Sb07g021710
Functional annotation ZOS8-05 - C2H2 zinc finger protein, expressed
UniProt C5YLL8
Pfam PF12874
Panther DB PTHR23067 PTHR23067:SF47
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G19380 : RNA recognition motif (RRM)-containing protein
RAP-DB (Rice) LOC_Os08g34310.1 : ZOS8-05 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G299500 expressed protein -
2 Sobic.001G385300 auxin-independent growth promoter protein, putative, expressed -
3 Sobic.008G171900 kinesin motor domain containing protein, putative, expressed K10406: kinesin family member C2/C3
4 Sobic.008G007600 - -
5 Sobic.003G352900 OsFtsH3 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
6 Sobic.001G076600 hydrolase, acting on carbon-nitrogen, putative, expressed -
7 Sobic.009G163100 kinesin motor domain containing protein, putative, expressed K10403: kinesin family member 22
8 Sobic.007G144100 eukaryotic translation initiation factor 3 subunit C, putative, expressed K03252: translation initiation factor 3 subunit C
9 Sobic.006G265800 OsFBX154 - F-box domain containing protein, expressed -
10 Sobic.003G379000 OsMADS2 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
11 Sobic.005G045800 serine/threonine-protein kinase WNK4, putative, expressed K08867: WNK, WNK lysine deficient protein kinase
12 Sobic.004G038400 fruit bromelain precursor, putative, expressed -
13 Sobic.004G250800 pre-mRNA-processing factor 31, putative, expressed K12844: U4/U6 small nuclear ribonucleoprotein PRP31
14 Sobic.008G124600 expressed protein -
15 Sobic.003G072700 expressed protein -
16 Sobic.003G376900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed -
17 Sobic.010G263400 expressed protein -
18 Sobic.007G063800 - -
19 Sobic.001G308500 glycosyltransferase family protein 1, putative, expressed -
20 Sobic.005G020600 Mad3/BUB1 homology region 1 domain containing protein, expressed -


Gene co-expression network
sample Sobic007G141600 Sobic007G141600 Sobic002G299500 Sobic002G299500 Sobic007G141600--Sobic002G299500 Sobic001G385300 Sobic001G385300 Sobic007G141600--Sobic001G385300 Sobic008G171900 Sobic008G171900 Sobic007G141600--Sobic008G171900 Sobic008G007600 Sobic008G007600 Sobic007G141600--Sobic008G007600 Sobic003G352900 Sobic003G352900 Sobic007G141600--Sobic003G352900 Sobic001G076600 Sobic001G076600 Sobic007G141600--Sobic001G076600 Sobic009G163100 Sobic009G163100 Sobic007G141600--Sobic009G163100 Sobic007G144100 Sobic007G144100 Sobic007G141600--Sobic007G144100 Sobic006G265800 Sobic006G265800 Sobic007G141600--Sobic006G265800 Sobic002G299500--Sobic008G171900 Sobic003G376900 Sobic003G376900 Sobic002G299500--Sobic003G376900 Sobic002G299500--Sobic009G163100 Sobic005G020600 Sobic005G020600 Sobic002G299500--Sobic005G020600 Sobic002G299500--Sobic008G007600 Sobic002G299500--Sobic003G352900 Sobic004G250800 Sobic004G250800 Sobic002G299500--Sobic004G250800 Sobic009G202000 Sobic009G202000 Sobic002G299500--Sobic009G202000 Sobic001G072000 Sobic001G072000 Sobic002G299500--Sobic001G072000 Sobic001G385300--Sobic003G376900 Sobic001G385300--Sobic002G299500 Sobic001G385300--Sobic003G352900 Sobic001G385300--Sobic009G163100 Sobic001G385300--Sobic008G171900 Sobic005G045800 Sobic005G045800 Sobic001G385300--Sobic005G045800 Sobic001G385300--Sobic007G141600 Sobic001G385300--Sobic005G020600 Sobic004G298600 Sobic004G298600 Sobic001G385300--Sobic004G298600 Sobic008G171900--Sobic002G299500 Sobic008G171900--Sobic009G163100 Sobic004G241300 Sobic004G241300 Sobic008G171900--Sobic004G241300 Sobic001G435700 Sobic001G435700 Sobic008G171900--Sobic001G435700 Sobic008G156600 Sobic008G156600 Sobic008G171900--Sobic008G156600 Sobic008G171900--Sobic005G020600 Sobic008G171900--Sobic003G376900 Sobic008G171900--Sobic008G007600 Sobic008G171900--Sobic001G385300 Sobic010G266600 Sobic010G266600 Sobic008G007600--Sobic010G266600 Sobic002G364700 Sobic002G364700 Sobic008G007600--Sobic002G364700 Sobic002G307400 Sobic002G307400 Sobic008G007600--Sobic002G307400 Sobic008G071800 Sobic008G071800 Sobic008G007600--Sobic008G071800 Sobic007G063800 Sobic007G063800 Sobic008G007600--Sobic007G063800 Sobic009G061500 Sobic009G061500 Sobic008G007600--Sobic009G061500 Sobic006G204500 Sobic006G204500 Sobic008G007600--Sobic006G204500 Sobic008G007600--Sobic002G299500 Sobic001G340800 Sobic001G340800 Sobic008G007600--Sobic001G340800 Sobic003G352900--Sobic007G144100 Sobic003G352900--Sobic002G299500 Sobic003G352900--Sobic001G076600 Sobic003G352900--Sobic003G376900 Sobic009G201000 Sobic009G201000 Sobic003G352900--Sobic009G201000 Sobic003G352900--Sobic005G045800 Sobic003G352900--Sobic009G163100 Sobic003G352900--Sobic001G385300 Sobic003G352900--Sobic008G007600 Sobic001G076600--Sobic003G352900 Sobic001G076600--Sobic007G144100 Sobic008G166100 Sobic008G166100 Sobic001G076600--Sobic008G166100 Sobic004G038400 Sobic004G038400 Sobic001G076600--Sobic004G038400 Sobic001G076600--Sobic002G299500 Sobic004G045632 Sobic004G045632 Sobic001G076600--Sobic004G045632 Sobic003G258100 Sobic003G258100 Sobic001G076600--Sobic003G258100 Sobic005G173700 Sobic005G173700 Sobic001G076600--Sobic005G173700 Sobic001G076600--Sobic003G376900 Sobic009G163100--Sobic008G156600 Sobic009G163100--Sobic005G020600 Sobic009G163100--Sobic008G171900 Sobic009G163100--Sobic001G072000 Sobic009G163100--Sobic002G299500 Sobic005G050400 Sobic005G050400 Sobic009G163100--Sobic005G050400 Sobic009G163100--Sobic001G435700 Sobic001G112600 Sobic001G112600 Sobic009G163100--Sobic001G112600 Sobic001G322400 Sobic001G322400 Sobic009G163100--Sobic001G322400 Sobic007G144100--Sobic003G258100 Sobic007G144100--Sobic003G352900 Sobic007G144100--Sobic001G076600 Sobic003G217800 Sobic003G217800 Sobic007G144100--Sobic003G217800 Sobic010G058300 Sobic010G058300 Sobic007G144100--Sobic010G058300 Sobic001G506400 Sobic001G506400 Sobic007G144100--Sobic001G506400 Sobic007G144100--Sobic002G299500 Sobic007G144100--Sobic004G045632 Sobic007G144100--Sobic004G038400 Sobic001G384200 Sobic001G384200 Sobic006G265800--Sobic001G384200 Sobic006G134500 Sobic006G134500 Sobic006G265800--Sobic006G134500 Sobic001G400000 Sobic001G400000 Sobic006G265800--Sobic001G400000 Sobic006G265800--Sobic009G163100 Sobic006G265800--Sobic009G201000 Sobic003G024100 Sobic003G024100 Sobic006G265800--Sobic003G024100 Sobic006G265800--Sobic008G156600 Sobic003G244400 Sobic003G244400 Sobic006G265800--Sobic003G244400 Sobic006G265800--Sobic008G007600
Octagon: transcription factors


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