Gene annotation
Transcriptome id Sobic.003G072700.1
Synonym Sb03g006155
Functional annotation expressed protein
UniProt A0A1B6Q1V7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g05460.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G263400 expressed protein -
2 Sobic.004G014500 THION20 - Plant thionin family protein precursor, putative, expressed -
3 Sobic.006G152700 - -
4 Sobic.003G379000 OsMADS2 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
5 Sobic.007G141600 ZOS8-05 - C2H2 zinc finger protein, expressed -
6 Sobic.003G258100 dynamin family protein, putative, expressed -
7 Sobic.002G299500 expressed protein -
8 Sobic.006G115900 fasciclin domain containing protein, expressed -
9 Sobic.007G146200 pectinesterase, putative, expressed K01051: pectinesterase
10 Sobic.007G060100 expressed protein -
11 Sobic.009G142500 OsMADS4 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
12 Sobic.004G250800 pre-mRNA-processing factor 31, putative, expressed K12844: U4/U6 small nuclear ribonucleoprotein PRP31
13 Sobic.007G144100 eukaryotic translation initiation factor 3 subunit C, putative, expressed K03252: translation initiation factor 3 subunit C
14 Sobic.003G217800 ras-related protein, putative, expressed K07936: GTP-binding nuclear protein Ran
15 Sobic.008G171900 kinesin motor domain containing protein, putative, expressed K10406: kinesin family member C2/C3
16 Sobic.010G057600 expressed protein -
17 Sobic.008G007600 - -
18 Sobic.004G062600 OsFBX154 - F-box domain containing protein, expressed -
19 Sobic.005G045800 serine/threonine-protein kinase WNK4, putative, expressed K08867: WNK, WNK lysine deficient protein kinase
20 Sobic.003G018000 expressed protein -


Gene co-expression network
sample Sobic003G072700 Sobic003G072700 Sobic010G263400 Sobic010G263400 Sobic003G072700--Sobic010G263400 Sobic004G014500 Sobic004G014500 Sobic003G072700--Sobic004G014500 Sobic006G152700 Sobic006G152700 Sobic003G072700--Sobic006G152700 Sobic003G379000 Sobic003G379000 Sobic003G072700--Sobic003G379000 Sobic007G141600 Sobic007G141600 Sobic003G072700--Sobic007G141600 Sobic003G258100 Sobic003G258100 Sobic003G072700--Sobic003G258100 Sobic002G299500 Sobic002G299500 Sobic003G072700--Sobic002G299500 Sobic006G115900 Sobic006G115900 Sobic003G072700--Sobic006G115900 Sobic007G146200 Sobic007G146200 Sobic003G072700--Sobic007G146200 Sobic007G060100 Sobic007G060100 Sobic010G263400--Sobic007G060100 Sobic010G263400--Sobic003G258100 Sobic010G263400--Sobic003G072700 Sobic007G144100 Sobic007G144100 Sobic010G263400--Sobic007G144100 Sobic004G168900 Sobic004G168900 Sobic010G263400--Sobic004G168900 Sobic010G263400--Sobic002G299500 Sobic003G217800 Sobic003G217800 Sobic010G263400--Sobic003G217800 Sobic004G038400 Sobic004G038400 Sobic010G263400--Sobic004G038400 Sobic004G250800 Sobic004G250800 Sobic010G263400--Sobic004G250800 Sobic006G171600 Sobic006G171600 Sobic004G014500--Sobic006G171600 Sobic010G142650 Sobic010G142650 Sobic004G014500--Sobic010G142650 Sobic004G014500--Sobic004G250800 Sobic001G442400 Sobic001G442400 Sobic004G014500--Sobic001G442400 Sobic009G202000 Sobic009G202000 Sobic004G014500--Sobic009G202000 Sobic010G003200 Sobic010G003200 Sobic004G014500--Sobic010G003200 Sobic006G115700 Sobic006G115700 Sobic004G014500--Sobic006G115700 Sobic005G110160 Sobic005G110160 Sobic004G014500--Sobic005G110160 Sobic001G207900 Sobic001G207900 Sobic004G014500--Sobic001G207900 Sobic007G012600 Sobic007G012600 Sobic006G152700--Sobic007G012600 Sobic006G152700--Sobic003G072700 Sobic003G396500 Sobic003G396500 Sobic006G152700--Sobic003G396500 Sobic003G377300 Sobic003G377300 Sobic006G152700--Sobic003G377300 Sobic008G188800 Sobic008G188800 Sobic006G152700--Sobic008G188800 Sobic008G140600 Sobic008G140600 Sobic006G152700--Sobic008G140600 Sobic009G142500 Sobic009G142500 Sobic006G152700--Sobic009G142500 Sobic006G152700--Sobic007G146200 Sobic006G152700--Sobic003G258100 Sobic006G256400 Sobic006G256400 Sobic003G379000--Sobic006G256400 Sobic002G188300 Sobic002G188300 Sobic003G379000--Sobic002G188300 Sobic006G200300 Sobic006G200300 Sobic003G379000--Sobic006G200300 Sobic007G193600 Sobic007G193600 Sobic003G379000--Sobic007G193600 Sobic007G133100 Sobic007G133100 Sobic003G379000--Sobic007G133100 Sobic008G155000 Sobic008G155000 Sobic003G379000--Sobic008G155000 Sobic004G003300 Sobic004G003300 Sobic003G379000--Sobic004G003300 Sobic002G307400 Sobic002G307400 Sobic003G379000--Sobic002G307400 Sobic003G379000--Sobic001G442400 Sobic007G141600--Sobic002G299500 Sobic001G385300 Sobic001G385300 Sobic007G141600--Sobic001G385300 Sobic008G171900 Sobic008G171900 Sobic007G141600--Sobic008G171900 Sobic008G007600 Sobic008G007600 Sobic007G141600--Sobic008G007600 Sobic003G352900 Sobic003G352900 Sobic007G141600--Sobic003G352900 Sobic001G076600 Sobic001G076600 Sobic007G141600--Sobic001G076600 Sobic009G163100 Sobic009G163100 Sobic007G141600--Sobic009G163100 Sobic007G141600--Sobic007G144100 Sobic006G265800 Sobic006G265800 Sobic007G141600--Sobic006G265800 Sobic003G258100--Sobic007G144100 Sobic003G258100--Sobic003G217800 Sobic003G258100--Sobic010G263400 Sobic003G258100--Sobic001G076600 Sobic003G258100--Sobic003G352900 Sobic001G506400 Sobic001G506400 Sobic003G258100--Sobic001G506400 Sobic003G258100--Sobic007G060100 Sobic003G258100--Sobic002G299500 Sobic003G018000 Sobic003G018000 Sobic003G258100--Sobic003G018000 Sobic002G299500--Sobic008G171900 Sobic003G376900 Sobic003G376900 Sobic002G299500--Sobic003G376900 Sobic002G299500--Sobic009G163100 Sobic005G020600 Sobic005G020600 Sobic002G299500--Sobic005G020600 Sobic002G299500--Sobic008G007600 Sobic002G299500--Sobic003G352900 Sobic002G299500--Sobic004G250800 Sobic002G299500--Sobic009G202000 Sobic001G072000 Sobic001G072000 Sobic002G299500--Sobic001G072000 Sobic002G120800 Sobic002G120800 Sobic006G115900--Sobic002G120800 Sobic009G147200 Sobic009G147200 Sobic006G115900--Sobic009G147200 Sobic006G115900--Sobic003G072700 Sobic009G158000 Sobic009G158000 Sobic006G115900--Sobic009G158000 Sobic006G115900--Sobic004G014500 Sobic006G115900--Sobic007G146200 Sobic006G115900--Sobic010G263400 Sobic006G115900--Sobic007G060100 Sobic006G039500 Sobic006G039500 Sobic006G115900--Sobic006G039500 Sobic002G322700 Sobic002G322700 Sobic007G146200--Sobic002G322700 Sobic007G146200--Sobic008G188800 Sobic007G146200--Sobic003G072700 Sobic010G009700 Sobic010G009700 Sobic007G146200--Sobic010G009700 Sobic009G125800 Sobic009G125800 Sobic007G146200--Sobic009G125800 Sobic007G146200--Sobic006G152700 Sobic005G045800 Sobic005G045800 Sobic007G146200--Sobic005G045800 Sobic007G146200--Sobic007G141600 Sobic007G146200--Sobic008G140600
Octagon: transcription factors


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