Gene annotation
Transcriptome id Sobic.007G146200.1
Synonym Sb07g022090
Functional annotation pectinesterase, putative, expressed
UniProt C5YLR6
Pfam PF04043 PF01095
Panther DB PTHR31707 PTHR31707:SF10
NCBI CDD -
KEGG Orthology K01051; pectinesterase
Gene Ontology GO:0004857; enzyme inhibitor activity GO:0005618cell wall


Orthologs (automatic annotation)
TAIR AT3G43270 : Plant invertase/pectin methylesterase inhibitor superfamily
RAP-DB (Rice) LOC_Os08g34900.1 : pectinesterase, putative, expressed
MaizeGDB (Corn) Zm00025a035335 , Zm00025a049134 , Zm00025a026574 , Zm00025a030727
Brachypodium KQK03643 , KQK04130 , KQJ98516
Barley HORVU3Hr1G091360.6 , HORVU3Hr1G091360.7 , HORVU3Hr1G091360.4 , HORVU3Hr1G091360.2 , HORVU3Hr1G091360.3 , HORVU3Hr1G091360.1 , HORVU3Hr1G077630.5 , HORVU3Hr1G077630.1 , HORVU3Hr1G077630.2 , HORVU3Hr1G077630.3 , HORVU6Hr1G084030.4 , HORVU6Hr1G084030.1 , HORVU6Hr1G084030.3 , HORVU6Hr1G084030.2 , HORVU2Hr1G018710.4 , HORVU2Hr1G018710.1 , HORVU2Hr1G018710.3
Wheat TraesCS1D02G230800 , TraesCS6B02G383700 , TraesCS6A02G351000 , TraesCS2A02G109600 , TraesCS6D02G333500 , TraesCS3D02G318800 , TraesCS2D02G109800 , TraesCS2B02G127600 , TraesCS1B02G243000 , TraesCS3B02G354300 , TraesCS1A02G231500 , TraesCS3A02G325500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G322700 expressed protein -
2 Sobic.008G188800 ankyrin repeat domain-containing protein, putative, expressed -
3 Sobic.003G072700 expressed protein -
4 Sobic.010G009700 OsFBX182 - F-box domain containing protein, expressed -
5 Sobic.009G125800 expressed protein -
6 Sobic.006G152700 - -
7 Sobic.005G045800 serine/threonine-protein kinase WNK4, putative, expressed K08867: WNK, WNK lysine deficient protein kinase
8 Sobic.007G141600 ZOS8-05 - C2H2 zinc finger protein, expressed -
9 Sobic.008G140600 targeting protein for Xklp2 containing protein, expressed -
10 Sobic.005G008850 - -
11 Sobic.003G377300 expressed protein K11643: CHD4, chromodomain-helicase-DNA-binding protein 4
12 Sobic.001G131900 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
13 Sobic.009G136000 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
14 Sobic.009G084700 - -
15 Sobic.010G263400 expressed protein -
16 Sobic.001G385300 auxin-independent growth promoter protein, putative, expressed -
17 Sobic.004G062600 OsFBX154 - F-box domain containing protein, expressed -
18 Sobic.009G131200 expressed protein -
19 Sobic.008G171900 kinesin motor domain containing protein, putative, expressed K10406: kinesin family member C2/C3
20 Sobic.002G151500 R-interacting factor 1, putative, expressed -


Gene co-expression network
sample Sobic007G146200 Sobic007G146200 Sobic002G322700 Sobic002G322700 Sobic007G146200--Sobic002G322700 Sobic008G188800 Sobic008G188800 Sobic007G146200--Sobic008G188800 Sobic003G072700 Sobic003G072700 Sobic007G146200--Sobic003G072700 Sobic010G009700 Sobic010G009700 Sobic007G146200--Sobic010G009700 Sobic009G125800 Sobic009G125800 Sobic007G146200--Sobic009G125800 Sobic006G152700 Sobic006G152700 Sobic007G146200--Sobic006G152700 Sobic005G045800 Sobic005G045800 Sobic007G146200--Sobic005G045800 Sobic007G141600 Sobic007G141600 Sobic007G146200--Sobic007G141600 Sobic008G140600 Sobic008G140600 Sobic007G146200--Sobic008G140600 Sobic002G322700--Sobic010G009700 Sobic002G322700--Sobic005G045800 Sobic002G322700--Sobic007G146200 Sobic001G131900 Sobic001G131900 Sobic002G322700--Sobic001G131900 Sobic002G322700--Sobic008G140600 Sobic001G385300 Sobic001G385300 Sobic002G322700--Sobic001G385300 Sobic007G105700 Sobic007G105700 Sobic002G322700--Sobic007G105700 Sobic009G066200 Sobic009G066200 Sobic002G322700--Sobic009G066200 Sobic002G322700--Sobic008G188800 Sobic008G188800--Sobic007G146200 Sobic005G008850 Sobic005G008850 Sobic008G188800--Sobic005G008850 Sobic008G188800--Sobic006G152700 Sobic008G188800--Sobic009G125800 Sobic008G188800--Sobic008G140600 Sobic003G377300 Sobic003G377300 Sobic008G188800--Sobic003G377300 Sobic008G188800--Sobic002G322700 Sobic008G188800--Sobic003G072700 Sobic008G188800--Sobic010G009700 Sobic010G263400 Sobic010G263400 Sobic003G072700--Sobic010G263400 Sobic004G014500 Sobic004G014500 Sobic003G072700--Sobic004G014500 Sobic003G072700--Sobic006G152700 Sobic003G379000 Sobic003G379000 Sobic003G072700--Sobic003G379000 Sobic003G072700--Sobic007G141600 Sobic003G258100 Sobic003G258100 Sobic003G072700--Sobic003G258100 Sobic002G299500 Sobic002G299500 Sobic003G072700--Sobic002G299500 Sobic006G115900 Sobic006G115900 Sobic003G072700--Sobic006G115900 Sobic003G072700--Sobic007G146200 Sobic004G298600 Sobic004G298600 Sobic010G009700--Sobic004G298600 Sobic010G009700--Sobic001G131900 Sobic010G038200 Sobic010G038200 Sobic010G009700--Sobic010G038200 Sobic006G189000 Sobic006G189000 Sobic010G009700--Sobic006G189000 Sobic005G060100 Sobic005G060100 Sobic010G009700--Sobic005G060100 Sobic009G054400 Sobic009G054400 Sobic010G009700--Sobic009G054400 Sobic010G009700--Sobic002G322700 Sobic002G151500 Sobic002G151500 Sobic010G009700--Sobic002G151500 Sobic007G102300 Sobic007G102300 Sobic010G009700--Sobic007G102300 Sobic009G136000 Sobic009G136000 Sobic009G125800--Sobic009G136000 Sobic004G117400 Sobic004G117400 Sobic009G125800--Sobic004G117400 Sobic001G082800 Sobic001G082800 Sobic009G125800--Sobic001G082800 Sobic009G131200 Sobic009G131200 Sobic009G125800--Sobic009G131200 Sobic002G390800 Sobic002G390800 Sobic009G125800--Sobic002G390800 Sobic009G125800--Sobic010G009700 Sobic009G125800--Sobic007G146200 Sobic009G125800--Sobic008G188800 Sobic009G214500 Sobic009G214500 Sobic009G125800--Sobic009G214500 Sobic007G012600 Sobic007G012600 Sobic006G152700--Sobic007G012600 Sobic006G152700--Sobic003G072700 Sobic003G396500 Sobic003G396500 Sobic006G152700--Sobic003G396500 Sobic006G152700--Sobic003G377300 Sobic006G152700--Sobic008G188800 Sobic006G152700--Sobic008G140600 Sobic009G142500 Sobic009G142500 Sobic006G152700--Sobic009G142500 Sobic006G152700--Sobic007G146200 Sobic006G152700--Sobic003G258100 Sobic003G352900 Sobic003G352900 Sobic005G045800--Sobic003G352900 Sobic003G376900 Sobic003G376900 Sobic005G045800--Sobic003G376900 Sobic005G045800--Sobic001G385300 Sobic005G045800--Sobic002G299500 Sobic005G045800--Sobic001G131900 Sobic003G200000 Sobic003G200000 Sobic005G045800--Sobic003G200000 Sobic008G171900 Sobic008G171900 Sobic005G045800--Sobic008G171900 Sobic009G163100 Sobic009G163100 Sobic005G045800--Sobic009G163100 Sobic007G144100 Sobic007G144100 Sobic005G045800--Sobic007G144100 Sobic007G141600--Sobic002G299500 Sobic007G141600--Sobic001G385300 Sobic007G141600--Sobic008G171900 Sobic008G007600 Sobic008G007600 Sobic007G141600--Sobic008G007600 Sobic007G141600--Sobic003G352900 Sobic001G076600 Sobic001G076600 Sobic007G141600--Sobic001G076600 Sobic007G141600--Sobic009G163100 Sobic007G141600--Sobic007G144100 Sobic006G265800 Sobic006G265800 Sobic007G141600--Sobic006G265800 Sobic008G140600--Sobic003G377300 Sobic009G168100 Sobic009G168100 Sobic008G140600--Sobic009G168100 Sobic003G102100 Sobic003G102100 Sobic008G140600--Sobic003G102100 Sobic010G090000 Sobic010G090000 Sobic008G140600--Sobic010G090000 Sobic008G140600--Sobic005G045800 Sobic008G104000 Sobic008G104000 Sobic008G140600--Sobic008G104000 Sobic008G140600--Sobic007G141600 Sobic010G261800 Sobic010G261800 Sobic008G140600--Sobic010G261800 Sobic008G140600--Sobic002G322700
Octagon: transcription factors


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