Gene annotation
Transcriptome id Sobic.002G151500.3,Sobic.002G151500.2,Sobic.002G151500.7,Sobic.002G151500.6
Synonym
Functional annotation R-interacting factor 1, putative, expressed
UniProt A0A1B6QBH6 , A0A1B6QBJ8
Pfam PF03735
Panther DB PTHR33432 PTHR33432:SF2
NCBI CDD KOG4675; Uncharacterized conserved protein, contains ENT domain
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G13020 : Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein
RAP-DB (Rice) LOC_Os09g10710.3 : R-interacting factor 1, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G131900 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
2 Sobic.004G313400 transcription elongation factor SPT5 homolog 1, putative, expressed K15172: SUPT5H, transcription elongation factor SPT5
3 Sobic.010G009700 OsFBX182 - F-box domain containing protein, expressed -
4 Sobic.003G377300 expressed protein K11643: CHD4, chromodomain-helicase-DNA-binding protein 4
5 Sobic.003G352900 OsFtsH3 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
6 Sobic.007G144100 eukaryotic translation initiation factor 3 subunit C, putative, expressed K03252: translation initiation factor 3 subunit C
7 Sobic.003G258100 dynamin family protein, putative, expressed -
8 Sobic.005G045800 serine/threonine-protein kinase WNK4, putative, expressed K08867: WNK, WNK lysine deficient protein kinase
9 Sobic.004G298600 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
10 Sobic.008G140600 targeting protein for Xklp2 containing protein, expressed -
11 Sobic.003G293400 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
12 Sobic.006G189000 ubiquitin-conjugating enzyme, putative, expressed K10577: UBE2I, ubiquitin-conjugating enzyme E2 I
13 Sobic.001G076600 hydrolase, acting on carbon-nitrogen, putative, expressed -
14 Sobic.001G385300 auxin-independent growth promoter protein, putative, expressed -
15 Sobic.007G141600 ZOS8-05 - C2H2 zinc finger protein, expressed -
16 Sobic.009G066600 expressed protein -
17 Sobic.005G060100 growth regulator related protein, putative, expressed -
18 Sobic.010G261800 OsMADS16 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
19 Sobic.006G152700 - -
20 Sobic.001G080800 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase


Gene co-expression network
sample Sobic002G151500 Sobic002G151500 Sobic001G131900 Sobic001G131900 Sobic002G151500--Sobic001G131900 Sobic004G313400 Sobic004G313400 Sobic002G151500--Sobic004G313400 Sobic010G009700 Sobic010G009700 Sobic002G151500--Sobic010G009700 Sobic003G377300 Sobic003G377300 Sobic002G151500--Sobic003G377300 Sobic003G352900 Sobic003G352900 Sobic002G151500--Sobic003G352900 Sobic007G144100 Sobic007G144100 Sobic002G151500--Sobic007G144100 Sobic003G258100 Sobic003G258100 Sobic002G151500--Sobic003G258100 Sobic005G045800 Sobic005G045800 Sobic002G151500--Sobic005G045800 Sobic004G298600 Sobic004G298600 Sobic002G151500--Sobic004G298600 Sobic003G293400 Sobic003G293400 Sobic001G131900--Sobic003G293400 Sobic001G131900--Sobic003G352900 Sobic004G038400 Sobic004G038400 Sobic001G131900--Sobic004G038400 Sobic001G076600 Sobic001G076600 Sobic001G131900--Sobic001G076600 Sobic001G385300 Sobic001G385300 Sobic001G131900--Sobic001G385300 Sobic001G131900--Sobic005G045800 Sobic001G131900--Sobic004G298600 Sobic002G420100 Sobic002G420100 Sobic001G131900--Sobic002G420100 Sobic001G131900--Sobic007G144100 Sobic003G090000 Sobic003G090000 Sobic004G313400--Sobic003G090000 Sobic003G027000 Sobic003G027000 Sobic004G313400--Sobic003G027000 Sobic001G218600 Sobic001G218600 Sobic004G313400--Sobic001G218600 Sobic005G070301 Sobic005G070301 Sobic004G313400--Sobic005G070301 Sobic006G215800 Sobic006G215800 Sobic004G313400--Sobic006G215800 Sobic004G313400--Sobic002G151500 Sobic003G396500 Sobic003G396500 Sobic004G313400--Sobic003G396500 Sobic009G066600 Sobic009G066600 Sobic004G313400--Sobic009G066600 Sobic003G044000 Sobic003G044000 Sobic004G313400--Sobic003G044000 Sobic010G009700--Sobic004G298600 Sobic010G009700--Sobic001G131900 Sobic010G038200 Sobic010G038200 Sobic010G009700--Sobic010G038200 Sobic006G189000 Sobic006G189000 Sobic010G009700--Sobic006G189000 Sobic005G060100 Sobic005G060100 Sobic010G009700--Sobic005G060100 Sobic009G054400 Sobic009G054400 Sobic010G009700--Sobic009G054400 Sobic002G322700 Sobic002G322700 Sobic010G009700--Sobic002G322700 Sobic010G009700--Sobic002G151500 Sobic007G102300 Sobic007G102300 Sobic010G009700--Sobic007G102300 Sobic008G140600 Sobic008G140600 Sobic003G377300--Sobic008G140600 Sobic009G142500 Sobic009G142500 Sobic003G377300--Sobic009G142500 Sobic010G261800 Sobic010G261800 Sobic003G377300--Sobic010G261800 Sobic003G377300--Sobic002G151500 Sobic010G090000 Sobic010G090000 Sobic003G377300--Sobic010G090000 Sobic007G141600 Sobic007G141600 Sobic003G377300--Sobic007G141600 Sobic006G152700 Sobic006G152700 Sobic003G377300--Sobic006G152700 Sobic003G379000 Sobic003G379000 Sobic003G377300--Sobic003G379000 Sobic009G168100 Sobic009G168100 Sobic003G377300--Sobic009G168100 Sobic003G352900--Sobic007G144100 Sobic002G299500 Sobic002G299500 Sobic003G352900--Sobic002G299500 Sobic003G352900--Sobic001G076600 Sobic003G376900 Sobic003G376900 Sobic003G352900--Sobic003G376900 Sobic009G201000 Sobic009G201000 Sobic003G352900--Sobic009G201000 Sobic003G352900--Sobic005G045800 Sobic009G163100 Sobic009G163100 Sobic003G352900--Sobic009G163100 Sobic003G352900--Sobic001G385300 Sobic008G007600 Sobic008G007600 Sobic003G352900--Sobic008G007600 Sobic007G144100--Sobic003G258100 Sobic007G144100--Sobic003G352900 Sobic007G144100--Sobic001G076600 Sobic003G217800 Sobic003G217800 Sobic007G144100--Sobic003G217800 Sobic010G058300 Sobic010G058300 Sobic007G144100--Sobic010G058300 Sobic001G506400 Sobic001G506400 Sobic007G144100--Sobic001G506400 Sobic007G144100--Sobic002G299500 Sobic004G045632 Sobic004G045632 Sobic007G144100--Sobic004G045632 Sobic007G144100--Sobic004G038400 Sobic003G258100--Sobic007G144100 Sobic003G258100--Sobic003G217800 Sobic010G263400 Sobic010G263400 Sobic003G258100--Sobic010G263400 Sobic003G258100--Sobic001G076600 Sobic003G258100--Sobic003G352900 Sobic003G258100--Sobic001G506400 Sobic007G060100 Sobic007G060100 Sobic003G258100--Sobic007G060100 Sobic003G258100--Sobic002G299500 Sobic003G018000 Sobic003G018000 Sobic003G258100--Sobic003G018000 Sobic005G045800--Sobic003G352900 Sobic005G045800--Sobic003G376900 Sobic005G045800--Sobic001G385300 Sobic005G045800--Sobic002G299500 Sobic005G045800--Sobic001G131900 Sobic003G200000 Sobic003G200000 Sobic005G045800--Sobic003G200000 Sobic008G171900 Sobic008G171900 Sobic005G045800--Sobic008G171900 Sobic005G045800--Sobic009G163100 Sobic005G045800--Sobic007G144100 Sobic004G298600--Sobic001G385300 Sobic004G298600--Sobic001G131900 Sobic004G298600--Sobic003G293400 Sobic004G026600 Sobic004G026600 Sobic004G298600--Sobic004G026600 Sobic004G298600--Sobic005G060100 Sobic001G308500 Sobic001G308500 Sobic004G298600--Sobic001G308500 Sobic001G433600 Sobic001G433600 Sobic004G298600--Sobic001G433600 Sobic007G105700 Sobic007G105700 Sobic004G298600--Sobic007G105700 Sobic004G298600--Sobic003G352900
Octagon: transcription factors


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