Gene annotation
Transcriptome id Sobic.009G066600.1
Synonym Sb09g005560
Functional annotation expressed protein
UniProt C5YU65
Pfam -
Panther DB PTHR36800
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G25570 : -
RAP-DB (Rice) LOC_Os05g08820.1 : expressed protein
MaizeGDB (Corn) Zm00025a043113
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G066600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G131900 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
2 Sobic.004G313400 transcription elongation factor SPT5 homolog 1, putative, expressed K15172: SUPT5H, transcription elongation factor SPT5
3 Sobic.003G044000 lipase class 3 family protein, putative, expressed -
4 Sobic.006G189000 ubiquitin-conjugating enzyme, putative, expressed K10577: UBE2I, ubiquitin-conjugating enzyme E2 I
5 Sobic.005G045800 serine/threonine-protein kinase WNK4, putative, expressed K08867: WNK, WNK lysine deficient protein kinase
6 Sobic.002G151500 R-interacting factor 1, putative, expressed -
7 Sobic.003G352900 OsFtsH3 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
8 Sobic.004G038400 fruit bromelain precursor, putative, expressed -
9 Sobic.007G144100 eukaryotic translation initiation factor 3 subunit C, putative, expressed K03252: translation initiation factor 3 subunit C
10 Sobic.001G076600 hydrolase, acting on carbon-nitrogen, putative, expressed -
11 Sobic.003G090000 seven in absentia protein family protein, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1
12 Sobic.010G009700 OsFBX182 - F-box domain containing protein, expressed -
13 Sobic.002G108100 OsFBLD6 - F-box, LRR and FBD domain containing protein, expressed -
14 Sobic.007G060100 expressed protein -
15 Sobic.004G045632 - -
16 Sobic.001G218600 MATH domain containing protein, expressed -
17 Sobic.003G293400 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
18 Sobic.001G385300 auxin-independent growth promoter protein, putative, expressed -
19 Sobic.004G298600 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
20 Sobic.002G322700 expressed protein -


Gene co-expression network
sample Sobic009G066600 Sobic009G066600 Sobic001G131900 Sobic001G131900 Sobic009G066600--Sobic001G131900 Sobic004G313400 Sobic004G313400 Sobic009G066600--Sobic004G313400 Sobic003G044000 Sobic003G044000 Sobic009G066600--Sobic003G044000 Sobic006G189000 Sobic006G189000 Sobic009G066600--Sobic006G189000 Sobic005G045800 Sobic005G045800 Sobic009G066600--Sobic005G045800 Sobic002G151500 Sobic002G151500 Sobic009G066600--Sobic002G151500 Sobic003G352900 Sobic003G352900 Sobic009G066600--Sobic003G352900 Sobic004G038400 Sobic004G038400 Sobic009G066600--Sobic004G038400 Sobic007G144100 Sobic007G144100 Sobic009G066600--Sobic007G144100 Sobic003G293400 Sobic003G293400 Sobic001G131900--Sobic003G293400 Sobic001G131900--Sobic003G352900 Sobic001G131900--Sobic004G038400 Sobic001G076600 Sobic001G076600 Sobic001G131900--Sobic001G076600 Sobic001G385300 Sobic001G385300 Sobic001G131900--Sobic001G385300 Sobic001G131900--Sobic005G045800 Sobic004G298600 Sobic004G298600 Sobic001G131900--Sobic004G298600 Sobic002G420100 Sobic002G420100 Sobic001G131900--Sobic002G420100 Sobic001G131900--Sobic007G144100 Sobic003G090000 Sobic003G090000 Sobic004G313400--Sobic003G090000 Sobic003G027000 Sobic003G027000 Sobic004G313400--Sobic003G027000 Sobic001G218600 Sobic001G218600 Sobic004G313400--Sobic001G218600 Sobic005G070301 Sobic005G070301 Sobic004G313400--Sobic005G070301 Sobic006G215800 Sobic006G215800 Sobic004G313400--Sobic006G215800 Sobic004G313400--Sobic002G151500 Sobic003G396500 Sobic003G396500 Sobic004G313400--Sobic003G396500 Sobic004G313400--Sobic009G066600 Sobic004G313400--Sobic003G044000 Sobic003G044000--Sobic001G218600 Sobic003G044000--Sobic003G090000 Sobic003G044000--Sobic003G027000 Sobic001G506400 Sobic001G506400 Sobic003G044000--Sobic001G506400 Sobic003G044000--Sobic001G131900 Sobic003G044000--Sobic003G396500 Sobic003G044000--Sobic009G066600 Sobic003G044000--Sobic004G313400 Sobic003G044000--Sobic003G293400 Sobic006G189000--Sobic001G385300 Sobic006G189000--Sobic001G076600 Sobic003G376900 Sobic003G376900 Sobic006G189000--Sobic003G376900 Sobic006G189000--Sobic001G131900 Sobic006G189000--Sobic003G352900 Sobic006G189000--Sobic004G298600 Sobic010G009700 Sobic010G009700 Sobic006G189000--Sobic010G009700 Sobic006G189000--Sobic005G045800 Sobic001G380700 Sobic001G380700 Sobic006G189000--Sobic001G380700 Sobic005G045800--Sobic003G352900 Sobic005G045800--Sobic003G376900 Sobic005G045800--Sobic001G385300 Sobic002G299500 Sobic002G299500 Sobic005G045800--Sobic002G299500 Sobic005G045800--Sobic001G131900 Sobic003G200000 Sobic003G200000 Sobic005G045800--Sobic003G200000 Sobic008G171900 Sobic008G171900 Sobic005G045800--Sobic008G171900 Sobic009G163100 Sobic009G163100 Sobic005G045800--Sobic009G163100 Sobic005G045800--Sobic007G144100 Sobic002G151500--Sobic001G131900 Sobic002G151500--Sobic004G313400 Sobic002G151500--Sobic010G009700 Sobic003G377300 Sobic003G377300 Sobic002G151500--Sobic003G377300 Sobic002G151500--Sobic003G352900 Sobic002G151500--Sobic007G144100 Sobic003G258100 Sobic003G258100 Sobic002G151500--Sobic003G258100 Sobic002G151500--Sobic005G045800 Sobic002G151500--Sobic004G298600 Sobic003G352900--Sobic007G144100 Sobic003G352900--Sobic002G299500 Sobic003G352900--Sobic001G076600 Sobic003G352900--Sobic003G376900 Sobic009G201000 Sobic009G201000 Sobic003G352900--Sobic009G201000 Sobic003G352900--Sobic005G045800 Sobic003G352900--Sobic009G163100 Sobic003G352900--Sobic001G385300 Sobic008G007600 Sobic008G007600 Sobic003G352900--Sobic008G007600 Sobic005G173700 Sobic005G173700 Sobic004G038400--Sobic005G173700 Sobic009G048700 Sobic009G048700 Sobic004G038400--Sobic009G048700 Sobic004G038400--Sobic001G076600 Sobic004G168900 Sobic004G168900 Sobic004G038400--Sobic004G168900 Sobic003G005700 Sobic003G005700 Sobic004G038400--Sobic003G005700 Sobic004G038400--Sobic007G144100 Sobic002G243400 Sobic002G243400 Sobic004G038400--Sobic002G243400 Sobic008G056600 Sobic008G056600 Sobic004G038400--Sobic008G056600 Sobic009G002100 Sobic009G002100 Sobic004G038400--Sobic009G002100 Sobic007G144100--Sobic003G258100 Sobic007G144100--Sobic003G352900 Sobic007G144100--Sobic001G076600 Sobic003G217800 Sobic003G217800 Sobic007G144100--Sobic003G217800 Sobic010G058300 Sobic010G058300 Sobic007G144100--Sobic010G058300 Sobic007G144100--Sobic001G506400 Sobic007G144100--Sobic002G299500 Sobic004G045632 Sobic004G045632 Sobic007G144100--Sobic004G045632 Sobic007G144100--Sobic004G038400
Octagon: transcription factors


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