Gene annotation
Transcriptome id Sobic.002G108100.1
Synonym Sb02g009190
Functional annotation OsFBLD6 - F-box, LRR and FBD domain containing protein, expressed
UniProt A0A1W0W3C1
Pfam PF08387
Panther DB PTHR32212 PTHR32212:SF107
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G52670 : FBD, F-box, Skp2-like and Leucine Rich Repeat domains containing protein
RAP-DB (Rice) LOC_Os07g18560.1 : OsFBLD6 - F-box, LRR and FBD domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQK07654
Barley -
Wheat TraesCS1B02G317600 , TraesCS5D02G362900 , TraesCS1D02G346900 , TraesCS1D02G229200 , TraesCS5D02G362700 , TraesCS1D02G229100 , TraesCS1A02G227400 , TraesCS5B02G357600 , TraesCS1A02G307100
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G342500 methyltransferase, putative, expressed -
2 Sobic.008G155400 ankyrin, putative, expressed -
3 Sobic.005G045800 serine/threonine-protein kinase WNK4, putative, expressed K08867: WNK, WNK lysine deficient protein kinase
4 Sobic.009G066200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -
5 Sobic.003G200000 respiratory burst oxidase, putative, expressed -
6 Sobic.003G352900 OsFtsH3 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
7 Sobic.007G189100 SFC, putative, expressed K12489: Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
8 Sobic.007G118050 - -
9 Sobic.001G131900 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
10 Sobic.001G305900 GTP binding protein, putative, expressed -
11 Sobic.002G106200 OsFBLD6 - F-box, LRR and FBD domain containing protein, expressed -
12 Sobic.001G433600 - -
13 Sobic.009G066600 expressed protein -
14 Sobic.007G048900 OsFBX381 - F-box domain containing protein, expressed -
15 Sobic.002G322700 expressed protein -
16 Sobic.006G167100 - -
17 Sobic.007G118075 - -
18 Sobic.001G385300 auxin-independent growth promoter protein, putative, expressed -
19 Sobic.004G353300 growth regulator related protein, putative, expressed -
20 Sobic.007G106600 - -


Gene co-expression network
sample Sobic002G108100 Sobic002G108100 Sobic003G342500 Sobic003G342500 Sobic002G108100--Sobic003G342500 Sobic008G155400 Sobic008G155400 Sobic002G108100--Sobic008G155400 Sobic005G045800 Sobic005G045800 Sobic002G108100--Sobic005G045800 Sobic009G066200 Sobic009G066200 Sobic002G108100--Sobic009G066200 Sobic003G200000 Sobic003G200000 Sobic002G108100--Sobic003G200000 Sobic003G352900 Sobic003G352900 Sobic002G108100--Sobic003G352900 Sobic007G189100 Sobic007G189100 Sobic002G108100--Sobic007G189100 Sobic007G118050 Sobic007G118050 Sobic002G108100--Sobic007G118050 Sobic001G131900 Sobic001G131900 Sobic002G108100--Sobic001G131900 Sobic009G201000 Sobic009G201000 Sobic003G342500--Sobic009G201000 Sobic003G342500--Sobic003G352900 Sobic001G073700 Sobic001G073700 Sobic003G342500--Sobic001G073700 Sobic006G116900 Sobic006G116900 Sobic003G342500--Sobic006G116900 Sobic006G156400 Sobic006G156400 Sobic003G342500--Sobic006G156400 Sobic006G265800 Sobic006G265800 Sobic003G342500--Sobic006G265800 Sobic001G308500 Sobic001G308500 Sobic003G342500--Sobic001G308500 Sobic001G076600 Sobic001G076600 Sobic003G342500--Sobic001G076600 Sobic003G342500--Sobic002G108100 Sobic002G158300 Sobic002G158300 Sobic008G155400--Sobic002G158300 Sobic008G155400--Sobic003G342500 Sobic005G171700 Sobic005G171700 Sobic008G155400--Sobic005G171700 Sobic004G140400 Sobic004G140400 Sobic008G155400--Sobic004G140400 Sobic002G102300 Sobic002G102300 Sobic008G155400--Sobic002G102300 Sobic008G036600 Sobic008G036600 Sobic008G155400--Sobic008G036600 Sobic001G270700 Sobic001G270700 Sobic008G155400--Sobic001G270700 Sobic003G213000 Sobic003G213000 Sobic008G155400--Sobic003G213000 Sobic008G155400--Sobic002G108100 Sobic005G045800--Sobic003G352900 Sobic003G376900 Sobic003G376900 Sobic005G045800--Sobic003G376900 Sobic001G385300 Sobic001G385300 Sobic005G045800--Sobic001G385300 Sobic002G299500 Sobic002G299500 Sobic005G045800--Sobic002G299500 Sobic005G045800--Sobic001G131900 Sobic005G045800--Sobic003G200000 Sobic008G171900 Sobic008G171900 Sobic005G045800--Sobic008G171900 Sobic009G163100 Sobic009G163100 Sobic005G045800--Sobic009G163100 Sobic007G144100 Sobic007G144100 Sobic005G045800--Sobic007G144100 Sobic009G066200--Sobic001G131900 Sobic002G322700 Sobic002G322700 Sobic009G066200--Sobic002G322700 Sobic001G309200 Sobic001G309200 Sobic009G066200--Sobic001G309200 Sobic009G066200--Sobic005G045800 Sobic002G348400 Sobic002G348400 Sobic009G066200--Sobic002G348400 Sobic009G066200--Sobic006G265800 Sobic001G433600 Sobic001G433600 Sobic009G066200--Sobic001G433600 Sobic004G298600 Sobic004G298600 Sobic009G066200--Sobic004G298600 Sobic009G066200--Sobic001G385300 Sobic003G200000--Sobic005G045800 Sobic003G200000--Sobic009G163100 Sobic003G200000--Sobic007G189100 Sobic004G062600 Sobic004G062600 Sobic003G200000--Sobic004G062600 Sobic003G200000--Sobic001G385300 Sobic003G200000--Sobic003G352900 Sobic008G156600 Sobic008G156600 Sobic003G200000--Sobic008G156600 Sobic004G241300 Sobic004G241300 Sobic003G200000--Sobic004G241300 Sobic002G414800 Sobic002G414800 Sobic003G200000--Sobic002G414800 Sobic003G352900--Sobic007G144100 Sobic003G352900--Sobic002G299500 Sobic003G352900--Sobic001G076600 Sobic003G352900--Sobic003G376900 Sobic003G352900--Sobic009G201000 Sobic003G352900--Sobic005G045800 Sobic003G352900--Sobic009G163100 Sobic003G352900--Sobic001G385300 Sobic008G007600 Sobic008G007600 Sobic003G352900--Sobic008G007600 Sobic007G189100--Sobic001G433600 Sobic007G189100--Sobic003G200000 Sobic007G189100--Sobic001G308500 Sobic007G189100--Sobic001G131900 Sobic002G392400 Sobic002G392400 Sobic007G189100--Sobic002G392400 Sobic007G189100--Sobic005G045800 Sobic007G043700 Sobic007G043700 Sobic007G189100--Sobic007G043700 Sobic007G189100--Sobic003G352900 Sobic004G353300 Sobic004G353300 Sobic007G189100--Sobic004G353300 Sobic007G118075 Sobic007G118075 Sobic007G118050--Sobic007G118075 Sobic009G054400 Sobic009G054400 Sobic007G118050--Sobic009G054400 Sobic007G118050--Sobic002G108100 Sobic007G118050--Sobic001G433600 Sobic007G118050--Sobic004G353300 Sobic003G285700 Sobic003G285700 Sobic007G118050--Sobic003G285700 Sobic005G123400 Sobic005G123400 Sobic007G118050--Sobic005G123400 Sobic003G091600 Sobic003G091600 Sobic007G118050--Sobic003G091600 Sobic007G118050--Sobic003G200000 Sobic003G293400 Sobic003G293400 Sobic001G131900--Sobic003G293400 Sobic001G131900--Sobic003G352900 Sobic004G038400 Sobic004G038400 Sobic001G131900--Sobic004G038400 Sobic001G131900--Sobic001G076600 Sobic001G131900--Sobic001G385300 Sobic001G131900--Sobic005G045800 Sobic001G131900--Sobic004G298600 Sobic002G420100 Sobic002G420100 Sobic001G131900--Sobic002G420100 Sobic001G131900--Sobic007G144100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.