Gene annotation
Transcriptome id Sobic.003G044000.1
Synonym Sb03g003860
Functional annotation lipase class 3 family protein, putative, expressed
UniProt C5XMR1
Pfam PF01764
Panther DB PTHR31479 PTHR31479:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006629; lipid metabolic process


Orthologs (automatic annotation)
TAIR AT5G50890 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os01g14080.1 : lipase class 3 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a023190
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G218600 MATH domain containing protein, expressed -
2 Sobic.003G090000 seven in absentia protein family protein, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1
3 Sobic.003G027000 OsMADS3 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
4 Sobic.001G506400 expressed protein -
5 Sobic.001G131900 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
6 Sobic.003G396500 ZOS5-12 - C2H2 zinc finger protein, expressed -
7 Sobic.009G066600 expressed protein -
8 Sobic.004G313400 transcription elongation factor SPT5 homolog 1, putative, expressed K15172: SUPT5H, transcription elongation factor SPT5
9 Sobic.003G293400 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
10 Sobic.002G299200 PINHEAD, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
11 Sobic.010G157200 MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
12 Sobic.001G076600 hydrolase, acting on carbon-nitrogen, putative, expressed -
13 Sobic.007G144100 eukaryotic translation initiation factor 3 subunit C, putative, expressed K03252: translation initiation factor 3 subunit C
14 Sobic.005G070301 - K03007: RPB10, DNA-directed RNA polymerases I, II, and III subunit RPABC5
15 Sobic.006G215800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@microtubule associated protein, putative, expressed -
16 Sobic.002G304500 mutS family domain IV containing protein, expressed K08740: DNA mismatch repair protein MSH4
17 Sobic.004G038400 fruit bromelain precursor, putative, expressed -
18 Sobic.007G060100 expressed protein -
19 Sobic.002G336400 OsFBLD4 - F-box, LRR and FBD domain containing protein, expressed -
20 Sobic.003G352900 OsFtsH3 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein


Gene co-expression network
sample Sobic003G044000 Sobic003G044000 Sobic001G218600 Sobic001G218600 Sobic003G044000--Sobic001G218600 Sobic003G090000 Sobic003G090000 Sobic003G044000--Sobic003G090000 Sobic003G027000 Sobic003G027000 Sobic003G044000--Sobic003G027000 Sobic001G506400 Sobic001G506400 Sobic003G044000--Sobic001G506400 Sobic001G131900 Sobic001G131900 Sobic003G044000--Sobic001G131900 Sobic003G396500 Sobic003G396500 Sobic003G044000--Sobic003G396500 Sobic009G066600 Sobic009G066600 Sobic003G044000--Sobic009G066600 Sobic004G313400 Sobic004G313400 Sobic003G044000--Sobic004G313400 Sobic003G293400 Sobic003G293400 Sobic003G044000--Sobic003G293400 Sobic001G218600--Sobic003G090000 Sobic001G218600--Sobic003G027000 Sobic001G218600--Sobic003G396500 Sobic005G070301 Sobic005G070301 Sobic001G218600--Sobic005G070301 Sobic001G218600--Sobic001G506400 Sobic001G218600--Sobic003G044000 Sobic007G060100 Sobic007G060100 Sobic001G218600--Sobic007G060100 Sobic010G157200 Sobic010G157200 Sobic001G218600--Sobic010G157200 Sobic010G263400 Sobic010G263400 Sobic001G218600--Sobic010G263400 Sobic003G090000--Sobic003G027000 Sobic003G090000--Sobic001G218600 Sobic002G299200 Sobic002G299200 Sobic003G090000--Sobic002G299200 Sobic006G215800 Sobic006G215800 Sobic003G090000--Sobic006G215800 Sobic003G090000--Sobic003G396500 Sobic003G090000--Sobic004G313400 Sobic003G090000--Sobic003G044000 Sobic003G090000--Sobic005G070301 Sobic003G090000--Sobic010G157200 Sobic003G027000--Sobic003G090000 Sobic003G027000--Sobic001G218600 Sobic003G027000--Sobic002G299200 Sobic003G027000--Sobic005G070301 Sobic003G027000--Sobic004G313400 Sobic003G027000--Sobic003G396500 Sobic003G027000--Sobic006G215800 Sobic003G027000--Sobic003G044000 Sobic009G152120 Sobic009G152120 Sobic003G027000--Sobic009G152120 Sobic007G144100 Sobic007G144100 Sobic001G506400--Sobic007G144100 Sobic003G258100 Sobic003G258100 Sobic001G506400--Sobic003G258100 Sobic001G034200 Sobic001G034200 Sobic001G506400--Sobic001G034200 Sobic004G038400 Sobic004G038400 Sobic001G506400--Sobic004G038400 Sobic001G076600 Sobic001G076600 Sobic001G506400--Sobic001G076600 Sobic007G048900 Sobic007G048900 Sobic001G506400--Sobic007G048900 Sobic003G352900 Sobic003G352900 Sobic001G506400--Sobic003G352900 Sobic004G168900 Sobic004G168900 Sobic001G506400--Sobic004G168900 Sobic010G038300 Sobic010G038300 Sobic001G506400--Sobic010G038300 Sobic001G131900--Sobic003G293400 Sobic001G131900--Sobic003G352900 Sobic001G131900--Sobic004G038400 Sobic001G131900--Sobic001G076600 Sobic001G385300 Sobic001G385300 Sobic001G131900--Sobic001G385300 Sobic005G045800 Sobic005G045800 Sobic001G131900--Sobic005G045800 Sobic004G298600 Sobic004G298600 Sobic001G131900--Sobic004G298600 Sobic002G420100 Sobic002G420100 Sobic001G131900--Sobic002G420100 Sobic001G131900--Sobic007G144100 Sobic003G396500--Sobic001G218600 Sobic003G325600 Sobic003G325600 Sobic003G396500--Sobic003G325600 Sobic003G396500--Sobic003G090000 Sobic003G396500--Sobic002G299200 Sobic003G396500--Sobic003G027000 Sobic003G396500--Sobic006G215800 Sobic006G152700 Sobic006G152700 Sobic003G396500--Sobic006G152700 Sobic003G396500--Sobic005G070301 Sobic003G396500--Sobic004G313400 Sobic009G066600--Sobic001G131900 Sobic009G066600--Sobic004G313400 Sobic009G066600--Sobic003G044000 Sobic006G189000 Sobic006G189000 Sobic009G066600--Sobic006G189000 Sobic009G066600--Sobic005G045800 Sobic002G151500 Sobic002G151500 Sobic009G066600--Sobic002G151500 Sobic009G066600--Sobic003G352900 Sobic009G066600--Sobic004G038400 Sobic009G066600--Sobic007G144100 Sobic004G313400--Sobic003G090000 Sobic004G313400--Sobic003G027000 Sobic004G313400--Sobic001G218600 Sobic004G313400--Sobic005G070301 Sobic004G313400--Sobic006G215800 Sobic004G313400--Sobic002G151500 Sobic004G313400--Sobic003G396500 Sobic004G313400--Sobic009G066600 Sobic004G313400--Sobic003G044000 Sobic003G293400--Sobic001G131900 Sobic003G293400--Sobic003G352900 Sobic004G198300 Sobic004G198300 Sobic003G293400--Sobic004G198300 Sobic003G293400--Sobic001G076600 Sobic003G293400--Sobic002G420100 Sobic003G293400--Sobic004G038400 Sobic004G026600 Sobic004G026600 Sobic003G293400--Sobic004G026600 Sobic003G293400--Sobic004G298600 Sobic003G293400--Sobic007G144100
Octagon: transcription factors


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