Gene annotation
Transcriptome id Sobic.006G215800.1
Synonym ATMAP65-3, Sb06g028590, MAP65-3, PLE
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
microtubule associated protein, putative, expressed
UniProt C5YG21
Pfam -
Panther DB PTHR19321 PTHR19321:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008017; microtubule binding GO:0000910cytokinesis GO:0000226microtubule cytoskeleton organization


Orthologs (automatic annotation)
TAIR AT5G51600 : Microtubule associated protein (MAP65/ASE1) family protein
RAP-DB (Rice) LOC_Os01g49200.1 : microtubule associated protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G090000 seven in absentia protein family protein, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1
2 Sobic.003G027000 OsMADS3 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
3 Sobic.001G218600 MATH domain containing protein, expressed -
4 Sobic.004G313400 transcription elongation factor SPT5 homolog 1, putative, expressed K15172: SUPT5H, transcription elongation factor SPT5
5 Sobic.003G396500 ZOS5-12 - C2H2 zinc finger protein, expressed -
6 Sobic.002G299200 PINHEAD, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
7 Sobic.008G098700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pumilio-family RNA binding repeat containing protein, expressed -
8 Sobic.007G060100 expressed protein -
9 Sobic.005G070301 - K03007: RPB10, DNA-directed RNA polymerases I, II, and III subunit RPABC5
10 Sobic.002G106200 OsFBLD6 - F-box, LRR and FBD domain containing protein, expressed -
11 Sobic.003G044000 lipase class 3 family protein, putative, expressed -
12 Sobic.007G048900 OsFBX381 - F-box domain containing protein, expressed -
13 Sobic.001G288000 ankyrin repeat domain containing protein, putative, expressed -
14 Sobic.010G263400 expressed protein -
15 Sobic.009G152120 - -
16 Sobic.006G181500 RNA recognition motif containing protein, putative, expressed K03248: translation initiation factor 3 subunit G
17 Sobic.003G258100 dynamin family protein, putative, expressed -
18 Sobic.009G066600 expressed protein -
19 Sobic.001G506400 expressed protein -
20 Sobic.002G060400 OsFBX237 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic006G215800 Sobic006G215800 Sobic003G090000 Sobic003G090000 Sobic006G215800--Sobic003G090000 Sobic003G027000 Sobic003G027000 Sobic006G215800--Sobic003G027000 Sobic001G218600 Sobic001G218600 Sobic006G215800--Sobic001G218600 Sobic004G313400 Sobic004G313400 Sobic006G215800--Sobic004G313400 Sobic003G396500 Sobic003G396500 Sobic006G215800--Sobic003G396500 Sobic002G299200 Sobic002G299200 Sobic006G215800--Sobic002G299200 Sobic008G098700 Sobic008G098700 Sobic006G215800--Sobic008G098700 Sobic007G060100 Sobic007G060100 Sobic006G215800--Sobic007G060100 Sobic005G070301 Sobic005G070301 Sobic006G215800--Sobic005G070301 Sobic003G090000--Sobic003G027000 Sobic003G090000--Sobic001G218600 Sobic003G090000--Sobic002G299200 Sobic003G090000--Sobic006G215800 Sobic003G090000--Sobic003G396500 Sobic003G090000--Sobic004G313400 Sobic003G044000 Sobic003G044000 Sobic003G090000--Sobic003G044000 Sobic003G090000--Sobic005G070301 Sobic010G157200 Sobic010G157200 Sobic003G090000--Sobic010G157200 Sobic003G027000--Sobic003G090000 Sobic003G027000--Sobic001G218600 Sobic003G027000--Sobic002G299200 Sobic003G027000--Sobic005G070301 Sobic003G027000--Sobic004G313400 Sobic003G027000--Sobic003G396500 Sobic003G027000--Sobic006G215800 Sobic003G027000--Sobic003G044000 Sobic009G152120 Sobic009G152120 Sobic003G027000--Sobic009G152120 Sobic001G218600--Sobic003G090000 Sobic001G218600--Sobic003G027000 Sobic001G218600--Sobic003G396500 Sobic001G218600--Sobic005G070301 Sobic001G506400 Sobic001G506400 Sobic001G218600--Sobic001G506400 Sobic001G218600--Sobic003G044000 Sobic001G218600--Sobic007G060100 Sobic001G218600--Sobic010G157200 Sobic010G263400 Sobic010G263400 Sobic001G218600--Sobic010G263400 Sobic004G313400--Sobic003G090000 Sobic004G313400--Sobic003G027000 Sobic004G313400--Sobic001G218600 Sobic004G313400--Sobic005G070301 Sobic004G313400--Sobic006G215800 Sobic002G151500 Sobic002G151500 Sobic004G313400--Sobic002G151500 Sobic004G313400--Sobic003G396500 Sobic009G066600 Sobic009G066600 Sobic004G313400--Sobic009G066600 Sobic004G313400--Sobic003G044000 Sobic003G396500--Sobic001G218600 Sobic003G325600 Sobic003G325600 Sobic003G396500--Sobic003G325600 Sobic003G396500--Sobic003G090000 Sobic003G396500--Sobic002G299200 Sobic003G396500--Sobic003G027000 Sobic003G396500--Sobic006G215800 Sobic006G152700 Sobic006G152700 Sobic003G396500--Sobic006G152700 Sobic003G396500--Sobic005G070301 Sobic003G396500--Sobic004G313400 Sobic002G299200--Sobic003G027000 Sobic002G299200--Sobic003G090000 Sobic002G299200--Sobic003G396500 Sobic002G299200--Sobic009G152120 Sobic002G299200--Sobic001G218600 Sobic002G299200--Sobic006G215800 Sobic002G259301 Sobic002G259301 Sobic002G299200--Sobic002G259301 Sobic001G288000 Sobic001G288000 Sobic002G299200--Sobic001G288000 Sobic002G299200--Sobic005G070301 Sobic008G098700--Sobic006G215800 Sobic008G098700--Sobic002G299200 Sobic008G098700--Sobic003G090000 Sobic008G098700--Sobic009G152120 Sobic008G098700--Sobic003G027000 Sobic001G500500 Sobic001G500500 Sobic008G098700--Sobic001G500500 Sobic010G090700 Sobic010G090700 Sobic008G098700--Sobic010G090700 Sobic002G106200 Sobic002G106200 Sobic008G098700--Sobic002G106200 Sobic008G098700--Sobic003G396500 Sobic007G060100--Sobic010G263400 Sobic004G168900 Sobic004G168900 Sobic007G060100--Sobic004G168900 Sobic004G038400 Sobic004G038400 Sobic007G060100--Sobic004G038400 Sobic007G060100--Sobic001G506400 Sobic007G144100 Sobic007G144100 Sobic007G060100--Sobic007G144100 Sobic003G258100 Sobic003G258100 Sobic007G060100--Sobic003G258100 Sobic007G048900 Sobic007G048900 Sobic007G060100--Sobic007G048900 Sobic001G076600 Sobic001G076600 Sobic007G060100--Sobic001G076600 Sobic007G060100--Sobic001G218600 Sobic005G070301--Sobic001G218600 Sobic005G070301--Sobic003G027000 Sobic005G070301--Sobic004G313400 Sobic005G070301--Sobic007G144100 Sobic005G070301--Sobic003G090000 Sobic005G171900 Sobic005G171900 Sobic005G070301--Sobic005G171900 Sobic005G070301--Sobic003G258100 Sobic003G001901 Sobic003G001901 Sobic005G070301--Sobic003G001901 Sobic005G070301--Sobic003G396500
Octagon: transcription factors


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