Gene annotation
Transcriptome id Sobic.001G288000.1
Synonym Sb01g028256
Functional annotation ankyrin repeat domain containing protein, putative, expressed
UniProt A0A1B6QLP7
Pfam PF07719 PF13414 PF12796
Panther DB PTHR22904 PTHR22904:SF328
NCBI CDD KOG4412; 26S proteasome regulatory complex, subunit PSMD10
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G04710 : ankyrin repeat family protein
RAP-DB (Rice) LOC_Os01g09384.1 : ankyrin repeat domain containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK02960 , KQK02961 , KQK02962 , KQK02963 , KQK02964 , PNT70059
Barley HORVU3Hr1G023740.5 , HORVU3Hr1G023740.4 , HORVU3Hr1G023740.7 , HORVU3Hr1G023740.6 , HORVU3Hr1G023740.1 , HORVU3Hr1G023740.3 , HORVU3Hr1G023740.2
Wheat TraesCS3B02G145700 , TraesCS3D02G127500 , TraesCS3A02G126800 , TraesCS3A02G126800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G137400 ankyrin, putative, expressed -
2 Sobic.001G137500 ankyrin, putative, expressed -
3 Sobic.003G091300 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
4 Sobic.002G258000 homologous to AGL2 and AGL4: expression analysis and mapping data suggest that it is the ortholog of OsMADS24.(PubMedID : 9065695)@OsMADS8 - MADS-box family gene with MIKCc type-box, expressed -
5 Sobic.007G193300 OsMADS7 - MADS-box family gene with MIKCc type-box, expressed -
6 Sobic.002G299200 PINHEAD, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
7 Sobic.003G006000 expressed protein -
8 Sobic.002G178700 ubiquitin fusion protein, putative, expressed -
9 Sobic.001G419500 DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
10 Sobic.003G090000 seven in absentia protein family protein, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1
11 Sobic.001G500500 expressed protein -
12 Sobic.002G259301 - K15382: SLC50A, solute carrier family 50 (sugar transporter)
13 Sobic.003G088600 transcription factor X1, putative, expressed -
14 Sobic.006G215800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@microtubule associated protein, putative, expressed -
15 Sobic.003G396500 ZOS5-12 - C2H2 zinc finger protein, expressed -
16 Sobic.003G027000 OsMADS3 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
17 Sobic.004G313400 transcription elongation factor SPT5 homolog 1, putative, expressed K15172: SUPT5H, transcription elongation factor SPT5
18 Sobic.001G457600 piwi domain containing protein, expressed -
19 Sobic.004G218000 SET domain containing protein, expressed -
20 Sobic.008G137700 XH domain containing protein, expressed -


Gene co-expression network
sample Sobic001G288000 Sobic001G288000 Sobic001G137400 Sobic001G137400 Sobic001G288000--Sobic001G137400 Sobic001G137500 Sobic001G137500 Sobic001G288000--Sobic001G137500 Sobic003G091300 Sobic003G091300 Sobic001G288000--Sobic003G091300 Sobic002G258000 Sobic002G258000 Sobic001G288000--Sobic002G258000 Sobic007G193300 Sobic007G193300 Sobic001G288000--Sobic007G193300 Sobic002G299200 Sobic002G299200 Sobic001G288000--Sobic002G299200 Sobic003G006000 Sobic003G006000 Sobic001G288000--Sobic003G006000 Sobic002G178700 Sobic002G178700 Sobic001G288000--Sobic002G178700 Sobic001G419500 Sobic001G419500 Sobic001G288000--Sobic001G419500 Sobic001G137400--Sobic001G137500 Sobic001G137400--Sobic002G258000 Sobic001G137400--Sobic007G193300 Sobic001G457600 Sobic001G457600 Sobic001G137400--Sobic001G457600 Sobic010G194600 Sobic010G194600 Sobic001G137400--Sobic010G194600 Sobic001G137400--Sobic001G288000 Sobic009G243000 Sobic009G243000 Sobic001G137400--Sobic009G243000 Sobic001G086400 Sobic001G086400 Sobic001G137400--Sobic001G086400 Sobic001G137400--Sobic001G419500 Sobic001G137500--Sobic001G419500 Sobic001G137500--Sobic002G258000 Sobic001G137500--Sobic001G457600 Sobic001G137500--Sobic002G178700 Sobic001G137500--Sobic003G006000 Sobic001G137500--Sobic007G193300 Sobic001G137500--Sobic001G137400 Sobic001G137500--Sobic010G194600 Sobic003G088600 Sobic003G088600 Sobic001G137500--Sobic003G088600 Sobic010G111750 Sobic010G111750 Sobic003G091300--Sobic010G111750 Sobic003G091300--Sobic001G288000 Sobic003G091300--Sobic002G178700 Sobic003G091300--Sobic001G137500 Sobic003G091300--Sobic003G006000 Sobic003G091300--Sobic002G258000 Sobic003G091300--Sobic001G419500 Sobic002G205000 Sobic002G205000 Sobic003G091300--Sobic002G205000 Sobic004G031501 Sobic004G031501 Sobic003G091300--Sobic004G031501 Sobic002G258000--Sobic001G137500 Sobic002G258000--Sobic001G457600 Sobic002G258000--Sobic001G419500 Sobic002G258000--Sobic001G137400 Sobic002G258000--Sobic003G006000 Sobic002G258000--Sobic009G243000 Sobic002G258000--Sobic007G193300 Sobic002G258000--Sobic010G194600 Sobic002G258000--Sobic002G178700 Sobic007G193300--Sobic001G137500 Sobic001G216400 Sobic001G216400 Sobic007G193300--Sobic001G216400 Sobic007G193300--Sobic001G419500 Sobic005G166100 Sobic005G166100 Sobic007G193300--Sobic005G166100 Sobic003G381100 Sobic003G381100 Sobic007G193300--Sobic003G381100 Sobic007G128200 Sobic007G128200 Sobic007G193300--Sobic007G128200 Sobic004G234600 Sobic004G234600 Sobic007G193300--Sobic004G234600 Sobic007G193300--Sobic001G457600 Sobic002G121900 Sobic002G121900 Sobic007G193300--Sobic002G121900 Sobic003G027000 Sobic003G027000 Sobic002G299200--Sobic003G027000 Sobic003G090000 Sobic003G090000 Sobic002G299200--Sobic003G090000 Sobic003G396500 Sobic003G396500 Sobic002G299200--Sobic003G396500 Sobic009G152120 Sobic009G152120 Sobic002G299200--Sobic009G152120 Sobic001G218600 Sobic001G218600 Sobic002G299200--Sobic001G218600 Sobic006G215800 Sobic006G215800 Sobic002G299200--Sobic006G215800 Sobic002G259301 Sobic002G259301 Sobic002G299200--Sobic002G259301 Sobic002G299200--Sobic001G288000 Sobic005G070301 Sobic005G070301 Sobic002G299200--Sobic005G070301 Sobic003G006000--Sobic002G178700 Sobic003G006000--Sobic001G137500 Sobic003G006000--Sobic001G419500 Sobic006G271600 Sobic006G271600 Sobic003G006000--Sobic006G271600 Sobic002G078900 Sobic002G078900 Sobic003G006000--Sobic002G078900 Sobic003G006000--Sobic003G088600 Sobic003G006000--Sobic009G243000 Sobic003G006000--Sobic002G258000 Sobic003G006000--Sobic001G457600 Sobic002G178700--Sobic001G419500 Sobic002G178700--Sobic003G006000 Sobic002G178700--Sobic001G137500 Sobic002G178700--Sobic003G088600 Sobic009G063700 Sobic009G063700 Sobic002G178700--Sobic009G063700 Sobic002G178700--Sobic002G078900 Sobic001G459400 Sobic001G459400 Sobic002G178700--Sobic001G459400 Sobic008G137700 Sobic008G137700 Sobic002G178700--Sobic008G137700 Sobic003G300000 Sobic003G300000 Sobic002G178700--Sobic003G300000 Sobic001G419500--Sobic002G178700 Sobic001G419500--Sobic001G137500 Sobic001G419500--Sobic001G216400 Sobic001G419500--Sobic003G006000 Sobic001G419500--Sobic001G457600 Sobic001G419500--Sobic009G063700 Sobic001G419500--Sobic002G258000 Sobic001G419500--Sobic010G194600 Sobic009G075500 Sobic009G075500 Sobic001G419500--Sobic009G075500
Octagon: transcription factors


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