Gene annotation
Transcriptome id Sobic.008G137700.3,Sobic.008G137700.4,Sobic.008G137700.1
Synonym
Functional annotation XH domain containing protein, expressed
UniProt A0A1Z5R6L3 , A0A1B6PDR2
Pfam PF03469
Panther DB PTHR21596 PTHR21596:SF15
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G00380 : XH/XS domain-containing protein
RAP-DB (Rice) LOC_Os12g38440.2,LOC_Os12g38440.1 : XH domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.008G137700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G088600 transcription factor X1, putative, expressed -
2 Sobic.002G053350 - -
3 Sobic.001G419500 DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
4 Sobic.002G178700 ubiquitin fusion protein, putative, expressed -
5 Sobic.001G137500 ankyrin, putative, expressed -
6 Sobic.003G300000 expressed protein -
7 Sobic.004G234600 expressed protein -
8 Sobic.010G194600 CW-type Zinc Finger, putative, expressed -
9 Sobic.003G006000 expressed protein -
10 Sobic.003G129200 argonaute, putative, expressed -
11 Sobic.006G271600 RNA recognition motif containing protein, putative, expressed K13126: polyadenylate-binding protein
12 Sobic.001G216400 nodulin, putative, expressed K07192: flotillin
13 Sobic.003G374100 beta-galactosidase precursor, putative, expressed -
14 Sobic.001G457600 piwi domain containing protein, expressed -
15 Sobic.006G112300 RNA recognition motif family protein, expressed -
16 Sobic.007G128200 expressed protein -
17 Sobic.002G258000 homologous to AGL2 and AGL4: expression analysis and mapping data suggest that it is the ortholog of OsMADS24.(PubMedID : 9065695)@OsMADS8 - MADS-box family gene with MIKCc type-box, expressed -
18 Sobic.001G137800 ankyrin, putative, expressed -
19 Sobic.009G063700 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
20 Sobic.006G228000 glycine-rich protein 2, putative -


Gene co-expression network
sample Sobic008G137700 Sobic008G137700 Sobic003G088600 Sobic003G088600 Sobic008G137700--Sobic003G088600 Sobic002G053350 Sobic002G053350 Sobic008G137700--Sobic002G053350 Sobic001G419500 Sobic001G419500 Sobic008G137700--Sobic001G419500 Sobic002G178700 Sobic002G178700 Sobic008G137700--Sobic002G178700 Sobic001G137500 Sobic001G137500 Sobic008G137700--Sobic001G137500 Sobic003G300000 Sobic003G300000 Sobic008G137700--Sobic003G300000 Sobic004G234600 Sobic004G234600 Sobic008G137700--Sobic004G234600 Sobic010G194600 Sobic010G194600 Sobic008G137700--Sobic010G194600 Sobic003G006000 Sobic003G006000 Sobic008G137700--Sobic003G006000 Sobic003G088600--Sobic008G137700 Sobic003G088600--Sobic001G137500 Sobic003G088600--Sobic002G053350 Sobic003G088600--Sobic001G419500 Sobic003G088600--Sobic010G194600 Sobic006G271600 Sobic006G271600 Sobic003G088600--Sobic006G271600 Sobic003G088600--Sobic003G006000 Sobic009G219500 Sobic009G219500 Sobic003G088600--Sobic009G219500 Sobic003G088600--Sobic002G178700 Sobic002G053350--Sobic004G234600 Sobic002G053350--Sobic003G088600 Sobic002G053350--Sobic008G137700 Sobic007G128200 Sobic007G128200 Sobic002G053350--Sobic007G128200 Sobic001G216400 Sobic001G216400 Sobic002G053350--Sobic001G216400 Sobic002G053350--Sobic001G419500 Sobic002G053350--Sobic010G194600 Sobic007G193300 Sobic007G193300 Sobic002G053350--Sobic007G193300 Sobic002G053350--Sobic001G137500 Sobic001G419500--Sobic002G178700 Sobic001G419500--Sobic001G137500 Sobic001G419500--Sobic001G216400 Sobic001G419500--Sobic003G006000 Sobic001G457600 Sobic001G457600 Sobic001G419500--Sobic001G457600 Sobic009G063700 Sobic009G063700 Sobic001G419500--Sobic009G063700 Sobic002G258000 Sobic002G258000 Sobic001G419500--Sobic002G258000 Sobic001G419500--Sobic010G194600 Sobic009G075500 Sobic009G075500 Sobic001G419500--Sobic009G075500 Sobic002G178700--Sobic001G419500 Sobic002G178700--Sobic003G006000 Sobic002G178700--Sobic001G137500 Sobic002G178700--Sobic003G088600 Sobic002G178700--Sobic009G063700 Sobic002G078900 Sobic002G078900 Sobic002G178700--Sobic002G078900 Sobic001G459400 Sobic001G459400 Sobic002G178700--Sobic001G459400 Sobic002G178700--Sobic008G137700 Sobic002G178700--Sobic003G300000 Sobic001G137500--Sobic001G419500 Sobic001G137500--Sobic002G258000 Sobic001G137500--Sobic001G457600 Sobic001G137500--Sobic002G178700 Sobic001G137500--Sobic003G006000 Sobic001G137500--Sobic007G193300 Sobic001G137400 Sobic001G137400 Sobic001G137500--Sobic001G137400 Sobic001G137500--Sobic010G194600 Sobic001G137500--Sobic003G088600 Sobic010G183800 Sobic010G183800 Sobic003G300000--Sobic010G183800 Sobic003G300000--Sobic001G459400 Sobic003G092300 Sobic003G092300 Sobic003G300000--Sobic003G092300 Sobic003G300000--Sobic002G078900 Sobic003G300000--Sobic009G063700 Sobic003G300000--Sobic009G075500 Sobic003G300000--Sobic006G271600 Sobic004G281000 Sobic004G281000 Sobic003G300000--Sobic004G281000 Sobic003G300000--Sobic001G419500 Sobic004G234600--Sobic007G128200 Sobic004G234600--Sobic001G216400 Sobic004G234600--Sobic009G063700 Sobic004G234600--Sobic002G053350 Sobic004G234600--Sobic001G457600 Sobic004G234600--Sobic001G419500 Sobic004G234600--Sobic010G194600 Sobic001G158100 Sobic001G158100 Sobic004G234600--Sobic001G158100 Sobic004G234600--Sobic010G183800 Sobic010G194600--Sobic001G457600 Sobic010G194600--Sobic006G271600 Sobic010G194600--Sobic007G128200 Sobic010G194600--Sobic001G137500 Sobic010G194600--Sobic001G419500 Sobic010G194600--Sobic003G088600 Sobic010G194600--Sobic004G234600 Sobic010G194600--Sobic009G063700 Sobic010G194600--Sobic003G300000 Sobic003G006000--Sobic002G178700 Sobic003G006000--Sobic001G137500 Sobic003G006000--Sobic001G419500 Sobic003G006000--Sobic006G271600 Sobic003G006000--Sobic002G078900 Sobic003G006000--Sobic003G088600 Sobic009G243000 Sobic009G243000 Sobic003G006000--Sobic009G243000 Sobic003G006000--Sobic002G258000 Sobic003G006000--Sobic001G457600
Octagon: transcription factors


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