Gene annotation
Transcriptome id Sobic.001G137500.1,Sobic.001G137500.3
Synonym Sb01g012010
Functional annotation ankyrin, putative, expressed
UniProt A0A1B6QIW5 , A0A1Z5S5K0
Pfam PF07719 PF13414 PF12796
Panther DB PTHR22904 PTHR22904:SF326
NCBI CDD KOG4412; 26S proteasome regulatory complex, subunit PSMD10
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G04710 : ankyrin repeat family protein
RAP-DB (Rice) LOC_Os03g47620.1 : ankyrin, putative, expressed
MaizeGDB (Corn) Zm00025a005013
Brachypodium -
Barley -
Wheat TraesCS4A02G289900 , TraesCS4B02G024400
Populus -


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cDNA sequences
Sobic.001G137500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G419500 DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
2 Sobic.002G258000 homologous to AGL2 and AGL4: expression analysis and mapping data suggest that it is the ortholog of OsMADS24.(PubMedID : 9065695)@OsMADS8 - MADS-box family gene with MIKCc type-box, expressed -
3 Sobic.001G457600 piwi domain containing protein, expressed -
4 Sobic.002G178700 ubiquitin fusion protein, putative, expressed -
5 Sobic.003G006000 expressed protein -
6 Sobic.007G193300 OsMADS7 - MADS-box family gene with MIKCc type-box, expressed -
7 Sobic.001G137400 ankyrin, putative, expressed -
8 Sobic.010G194600 CW-type Zinc Finger, putative, expressed -
9 Sobic.003G088600 transcription factor X1, putative, expressed -
10 Sobic.007G128200 expressed protein -
11 Sobic.008G137700 XH domain containing protein, expressed -
12 Sobic.004G234600 expressed protein -
13 Sobic.006G271600 RNA recognition motif containing protein, putative, expressed K13126: polyadenylate-binding protein
14 Sobic.009G243000 OsFBL2 - F-box domain and LRR containing protein, expressed -
15 Sobic.001G216400 nodulin, putative, expressed K07192: flotillin
16 Sobic.002G053350 - -
17 Sobic.009G063700 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
18 Sobic.005G166100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
19 Sobic.001G288000 ankyrin repeat domain containing protein, putative, expressed -
20 Sobic.002G078900 agenet domain containing protein, expressed -


Gene co-expression network
sample Sobic001G137500 Sobic001G137500 Sobic001G419500 Sobic001G419500 Sobic001G137500--Sobic001G419500 Sobic002G258000 Sobic002G258000 Sobic001G137500--Sobic002G258000 Sobic001G457600 Sobic001G457600 Sobic001G137500--Sobic001G457600 Sobic002G178700 Sobic002G178700 Sobic001G137500--Sobic002G178700 Sobic003G006000 Sobic003G006000 Sobic001G137500--Sobic003G006000 Sobic007G193300 Sobic007G193300 Sobic001G137500--Sobic007G193300 Sobic001G137400 Sobic001G137400 Sobic001G137500--Sobic001G137400 Sobic010G194600 Sobic010G194600 Sobic001G137500--Sobic010G194600 Sobic003G088600 Sobic003G088600 Sobic001G137500--Sobic003G088600 Sobic001G419500--Sobic002G178700 Sobic001G419500--Sobic001G137500 Sobic001G216400 Sobic001G216400 Sobic001G419500--Sobic001G216400 Sobic001G419500--Sobic003G006000 Sobic001G419500--Sobic001G457600 Sobic009G063700 Sobic009G063700 Sobic001G419500--Sobic009G063700 Sobic001G419500--Sobic002G258000 Sobic001G419500--Sobic010G194600 Sobic009G075500 Sobic009G075500 Sobic001G419500--Sobic009G075500 Sobic002G258000--Sobic001G137500 Sobic002G258000--Sobic001G457600 Sobic002G258000--Sobic001G419500 Sobic002G258000--Sobic001G137400 Sobic002G258000--Sobic003G006000 Sobic009G243000 Sobic009G243000 Sobic002G258000--Sobic009G243000 Sobic002G258000--Sobic007G193300 Sobic002G258000--Sobic010G194600 Sobic002G258000--Sobic002G178700 Sobic001G457600--Sobic001G137500 Sobic001G457600--Sobic010G194600 Sobic001G457600--Sobic001G419500 Sobic001G457600--Sobic002G258000 Sobic007G128200 Sobic007G128200 Sobic001G457600--Sobic007G128200 Sobic004G234600 Sobic004G234600 Sobic001G457600--Sobic004G234600 Sobic001G457600--Sobic009G063700 Sobic004G281000 Sobic004G281000 Sobic001G457600--Sobic004G281000 Sobic001G457600--Sobic007G193300 Sobic002G178700--Sobic001G419500 Sobic002G178700--Sobic003G006000 Sobic002G178700--Sobic001G137500 Sobic002G178700--Sobic003G088600 Sobic002G178700--Sobic009G063700 Sobic002G078900 Sobic002G078900 Sobic002G178700--Sobic002G078900 Sobic001G459400 Sobic001G459400 Sobic002G178700--Sobic001G459400 Sobic008G137700 Sobic008G137700 Sobic002G178700--Sobic008G137700 Sobic003G300000 Sobic003G300000 Sobic002G178700--Sobic003G300000 Sobic003G006000--Sobic002G178700 Sobic003G006000--Sobic001G137500 Sobic003G006000--Sobic001G419500 Sobic006G271600 Sobic006G271600 Sobic003G006000--Sobic006G271600 Sobic003G006000--Sobic002G078900 Sobic003G006000--Sobic003G088600 Sobic003G006000--Sobic009G243000 Sobic003G006000--Sobic002G258000 Sobic003G006000--Sobic001G457600 Sobic007G193300--Sobic001G137500 Sobic007G193300--Sobic001G216400 Sobic007G193300--Sobic001G419500 Sobic005G166100 Sobic005G166100 Sobic007G193300--Sobic005G166100 Sobic003G381100 Sobic003G381100 Sobic007G193300--Sobic003G381100 Sobic007G193300--Sobic007G128200 Sobic007G193300--Sobic004G234600 Sobic007G193300--Sobic001G457600 Sobic002G121900 Sobic002G121900 Sobic007G193300--Sobic002G121900 Sobic001G137400--Sobic001G137500 Sobic001G137400--Sobic002G258000 Sobic001G137400--Sobic007G193300 Sobic001G137400--Sobic001G457600 Sobic001G137400--Sobic010G194600 Sobic001G288000 Sobic001G288000 Sobic001G137400--Sobic001G288000 Sobic001G137400--Sobic009G243000 Sobic001G086400 Sobic001G086400 Sobic001G137400--Sobic001G086400 Sobic001G137400--Sobic001G419500 Sobic010G194600--Sobic001G457600 Sobic010G194600--Sobic006G271600 Sobic010G194600--Sobic007G128200 Sobic010G194600--Sobic001G137500 Sobic010G194600--Sobic001G419500 Sobic010G194600--Sobic003G088600 Sobic010G194600--Sobic004G234600 Sobic010G194600--Sobic009G063700 Sobic010G194600--Sobic003G300000 Sobic003G088600--Sobic008G137700 Sobic003G088600--Sobic001G137500 Sobic002G053350 Sobic002G053350 Sobic003G088600--Sobic002G053350 Sobic003G088600--Sobic001G419500 Sobic003G088600--Sobic010G194600 Sobic003G088600--Sobic006G271600 Sobic003G088600--Sobic003G006000 Sobic009G219500 Sobic009G219500 Sobic003G088600--Sobic009G219500 Sobic003G088600--Sobic002G178700
Octagon: transcription factors


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