Gene annotation
Transcriptome id Sobic.001G216400.1
Synonym Sb01g019060
Functional annotation nodulin, putative, expressed
UniProt C5WYC5
Pfam PF01145
Panther DB PTHR13806 PTHR13806:SF23
NCBI CDD KOG2668; Flotillins
KEGG Orthology K07192; flotillin
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G25260 : SPFH/Band 7/PHB domain-containing membrane-associated protein family
RAP-DB (Rice) LOC_Os10g34150.1 : nodulin, putative, expressed
MaizeGDB (Corn) Zm00025a017598
Brachypodium KQJ97143 , KQJ97142 , KQJ97144
Barley HORVU1Hr1G042180.1 , HORVU1Hr1G042180.2 , HORVU5Hr1G078930.1 , HORVU5Hr1G078930.2 , HORVU5Hr1G078930.3 , HORVU5Hr1G078930.4
Wheat TraesCS1B02G174900 , TraesCS1D02G156300 , TraesCS5A02G301900 , TraesCS3B02G584800 , TraesCS5B02G299800 , TraesCS5D02G306900 , TraesCS6B02G170400 , TraesCS5B02G300400 , TraesCS5D02G307500 , TraesCS3A02G517200 , TraesCS1A02G159000 , TraesCS5A02G300700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G075500 OsMADS58 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
2 Sobic.004G234600 expressed protein -
3 Sobic.009G063700 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
4 Sobic.005G166100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
5 Sobic.001G419500 DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
6 Sobic.003G381100 OsMADS21 - MADS-box family gene with MIKCc type-box, expressed -
7 Sobic.006G213900 OsMADS31 - MADS-box family gene with MIKCc type-box, expressed -
8 Sobic.007G193300 OsMADS7 - MADS-box family gene with MIKCc type-box, expressed -
9 Sobic.004G056000 OsMADS29 - MADS-box family gene with MIKCc type-box, expressed -
10 Sobic.009G211300 MATH domain containing protein, expressed -
11 Sobic.007G128200 expressed protein -
12 Sobic.001G158100 MBTB43 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
13 Sobic.007G043000 transcription factor X1, putative, expressed -
14 Sobic.004G254100 pleiotropic drug resistance protein, putative, expressed -
15 Sobic.001G235200 MYB family transcription factor, putative, expressed -
16 Sobic.002G053350 - -
17 Sobic.003G063700 - -
18 Sobic.001G137800 ankyrin, putative, expressed -
19 Sobic.002G239101 - -
20 Sobic.001G459400 B3 DNA binding domain containing protein, expressed -


Gene co-expression network
sample Sobic001G216400 Sobic001G216400 Sobic009G075500 Sobic009G075500 Sobic001G216400--Sobic009G075500 Sobic004G234600 Sobic004G234600 Sobic001G216400--Sobic004G234600 Sobic009G063700 Sobic009G063700 Sobic001G216400--Sobic009G063700 Sobic005G166100 Sobic005G166100 Sobic001G216400--Sobic005G166100 Sobic001G419500 Sobic001G419500 Sobic001G216400--Sobic001G419500 Sobic003G381100 Sobic003G381100 Sobic001G216400--Sobic003G381100 Sobic006G213900 Sobic006G213900 Sobic001G216400--Sobic006G213900 Sobic007G193300 Sobic007G193300 Sobic001G216400--Sobic007G193300 Sobic004G056000 Sobic004G056000 Sobic001G216400--Sobic004G056000 Sobic001G459400 Sobic001G459400 Sobic009G075500--Sobic001G459400 Sobic009G075500--Sobic001G216400 Sobic009G075500--Sobic009G063700 Sobic003G092300 Sobic003G092300 Sobic009G075500--Sobic003G092300 Sobic002G239101 Sobic002G239101 Sobic009G075500--Sobic002G239101 Sobic009G075500--Sobic006G213900 Sobic001G158100 Sobic001G158100 Sobic009G075500--Sobic001G158100 Sobic003G300000 Sobic003G300000 Sobic009G075500--Sobic003G300000 Sobic009G075500--Sobic004G056000 Sobic007G128200 Sobic007G128200 Sobic004G234600--Sobic007G128200 Sobic004G234600--Sobic001G216400 Sobic004G234600--Sobic009G063700 Sobic002G053350 Sobic002G053350 Sobic004G234600--Sobic002G053350 Sobic001G457600 Sobic001G457600 Sobic004G234600--Sobic001G457600 Sobic004G234600--Sobic001G419500 Sobic010G194600 Sobic010G194600 Sobic004G234600--Sobic010G194600 Sobic004G234600--Sobic001G158100 Sobic010G183800 Sobic010G183800 Sobic004G234600--Sobic010G183800 Sobic009G063700--Sobic001G158100 Sobic009G063700--Sobic004G056000 Sobic009G063700--Sobic001G459400 Sobic009G063700--Sobic009G075500 Sobic009G063700--Sobic007G128200 Sobic009G063700--Sobic010G183800 Sobic009G063700--Sobic001G216400 Sobic009G063700--Sobic004G234600 Sobic009G063700--Sobic001G419500 Sobic005G166100--Sobic001G216400 Sobic005G166100--Sobic004G056000 Sobic005G166100--Sobic009G063700 Sobic005G166100--Sobic007G128200 Sobic005G166100--Sobic003G381100 Sobic005G166100--Sobic009G075500 Sobic005G166100--Sobic001G419500 Sobic005G166100--Sobic007G193300 Sobic006G097300 Sobic006G097300 Sobic005G166100--Sobic006G097300 Sobic002G178700 Sobic002G178700 Sobic001G419500--Sobic002G178700 Sobic001G137500 Sobic001G137500 Sobic001G419500--Sobic001G137500 Sobic001G419500--Sobic001G216400 Sobic003G006000 Sobic003G006000 Sobic001G419500--Sobic003G006000 Sobic001G419500--Sobic001G457600 Sobic001G419500--Sobic009G063700 Sobic002G258000 Sobic002G258000 Sobic001G419500--Sobic002G258000 Sobic001G419500--Sobic010G194600 Sobic001G419500--Sobic009G075500 Sobic003G381100--Sobic004G056000 Sobic003G381100--Sobic001G216400 Sobic008G072900 Sobic008G072900 Sobic003G381100--Sobic008G072900 Sobic003G027200 Sobic003G027200 Sobic003G381100--Sobic003G027200 Sobic003G381100--Sobic006G097300 Sobic004G254100 Sobic004G254100 Sobic003G381100--Sobic004G254100 Sobic007G043000 Sobic007G043000 Sobic003G381100--Sobic007G043000 Sobic003G381100--Sobic005G166100 Sobic003G381100--Sobic007G193300 Sobic001G235200 Sobic001G235200 Sobic006G213900--Sobic001G235200 Sobic006G213900--Sobic002G239101 Sobic006G134700 Sobic006G134700 Sobic006G213900--Sobic006G134700 Sobic002G159000 Sobic002G159000 Sobic006G213900--Sobic002G159000 Sobic004G168000 Sobic004G168000 Sobic006G213900--Sobic004G168000 Sobic005G070101 Sobic005G070101 Sobic006G213900--Sobic005G070101 Sobic006G213900--Sobic001G216400 Sobic006G213900--Sobic009G075500 Sobic003G063700 Sobic003G063700 Sobic006G213900--Sobic003G063700 Sobic007G193300--Sobic001G137500 Sobic007G193300--Sobic001G216400 Sobic007G193300--Sobic001G419500 Sobic007G193300--Sobic005G166100 Sobic007G193300--Sobic003G381100 Sobic007G193300--Sobic007G128200 Sobic007G193300--Sobic004G234600 Sobic007G193300--Sobic001G457600 Sobic002G121900 Sobic002G121900 Sobic007G193300--Sobic002G121900 Sobic004G056000--Sobic003G381100 Sobic004G056000--Sobic009G063700 Sobic003G020800 Sobic003G020800 Sobic004G056000--Sobic003G020800 Sobic004G056000--Sobic001G158100 Sobic004G056000--Sobic005G166100 Sobic004G056000--Sobic001G216400 Sobic004G056000--Sobic009G075500 Sobic004G056000--Sobic007G128200 Sobic004G056000--Sobic002G239101
Octagon: transcription factors


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