Gene annotation
Transcriptome id Sobic.007G043000.2,Sobic.007G043000.1
Synonym Sb07g003550
Functional annotation transcription factor X1, putative, expressed
UniProt A0A1Z5R804 , A0A1B6PFH4
Pfam PF03470 PF03468 PF03469
Panther DB PTHR21596 PTHR21596:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G15910 : XH/XS domain-containing protein
RAP-DB (Rice) LOC_Os02g19130.1 : transcription factor X1, putative, expressed
MaizeGDB (Corn) Zm00025a055189
Brachypodium KQJ95400 , PNT66792 , KQJ95399
Barley HORVU7Hr1G071790.11 , HORVU7Hr1G071790.10 , HORVU7Hr1G071790.13 , HORVU7Hr1G071790.12 , HORVU7Hr1G071790.15 , HORVU7Hr1G071790.14 , HORVU7Hr1G071790.5 , HORVU7Hr1G071790.4 , HORVU7Hr1G071790.7 , HORVU7Hr1G071790.6 , HORVU7Hr1G071790.3 , HORVU7Hr1G071790.2 , HORVU7Hr1G071790.9 , HORVU7Hr1G071790.8
Wheat TraesCS7D02G478000 , TraesCS6D02G249500 , TraesCS7D02G298100 , TraesCS7A02G302800 , TraesCS5D02G508600 , TraesCS5D02G508600 , TraesCS7B02G202900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G235100 MYB family transcription factor, putative, expressed -
2 Sobic.002G121900 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2
3 Sobic.004G254100 pleiotropic drug resistance protein, putative, expressed -
4 Sobic.008G138200 RNA recognition motif family protein, expressed -
5 Sobic.001G137800 ankyrin, putative, expressed -
6 Sobic.001G216400 nodulin, putative, expressed K07192: flotillin
7 Sobic.003G381100 OsMADS21 - MADS-box family gene with MIKCc type-box, expressed -
8 Sobic.007G128200 expressed protein -
9 Sobic.003G063700 - -
10 Sobic.007G193300 OsMADS7 - MADS-box family gene with MIKCc type-box, expressed -
11 Sobic.001G235200 MYB family transcription factor, putative, expressed -
12 Sobic.005G166100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
13 Sobic.004G234600 expressed protein -
14 Sobic.004G056000 OsMADS29 - MADS-box family gene with MIKCc type-box, expressed -
15 Sobic.003G374100 beta-galactosidase precursor, putative, expressed -
16 Sobic.006G213900 OsMADS31 - MADS-box family gene with MIKCc type-box, expressed -
17 Sobic.006G228000 glycine-rich protein 2, putative -
18 Sobic.002G053350 - -
19 Sobic.006G097300 F-box protein FBW2, putative, expressed -
20 Sobic.001G287900 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42


Gene co-expression network
sample Sobic007G043000 Sobic007G043000 Sobic001G235100 Sobic001G235100 Sobic007G043000--Sobic001G235100 Sobic002G121900 Sobic002G121900 Sobic007G043000--Sobic002G121900 Sobic004G254100 Sobic004G254100 Sobic007G043000--Sobic004G254100 Sobic008G138200 Sobic008G138200 Sobic007G043000--Sobic008G138200 Sobic001G137800 Sobic001G137800 Sobic007G043000--Sobic001G137800 Sobic001G216400 Sobic001G216400 Sobic007G043000--Sobic001G216400 Sobic003G381100 Sobic003G381100 Sobic007G043000--Sobic003G381100 Sobic007G128200 Sobic007G128200 Sobic007G043000--Sobic007G128200 Sobic003G063700 Sobic003G063700 Sobic007G043000--Sobic003G063700 Sobic001G235100--Sobic007G043000 Sobic001G235100--Sobic004G254100 Sobic001G235100--Sobic008G138200 Sobic001G235100--Sobic002G121900 Sobic001G235100--Sobic001G137800 Sobic006G213900 Sobic006G213900 Sobic001G235100--Sobic006G213900 Sobic001G235200 Sobic001G235200 Sobic001G235100--Sobic001G235200 Sobic001G235100--Sobic003G063700 Sobic001G235100--Sobic001G216400 Sobic002G121900--Sobic007G043000 Sobic001G287900 Sobic001G287900 Sobic002G121900--Sobic001G287900 Sobic002G121900--Sobic001G137800 Sobic002G121900--Sobic007G128200 Sobic002G121900--Sobic001G235100 Sobic007G193300 Sobic007G193300 Sobic002G121900--Sobic007G193300 Sobic002G121900--Sobic008G138200 Sobic003G374100 Sobic003G374100 Sobic002G121900--Sobic003G374100 Sobic001G171200 Sobic001G171200 Sobic002G121900--Sobic001G171200 Sobic004G254100--Sobic007G043000 Sobic004G254100--Sobic001G235100 Sobic004G254100--Sobic001G216400 Sobic004G254100--Sobic003G381100 Sobic004G254100--Sobic008G138200 Sobic004G254100--Sobic007G128200 Sobic004G254100--Sobic007G193300 Sobic004G056000 Sobic004G056000 Sobic004G254100--Sobic004G056000 Sobic004G254100--Sobic002G121900 Sobic008G138200--Sobic007G043000 Sobic008G138200--Sobic001G235100 Sobic008G138200--Sobic004G254100 Sobic008G138200--Sobic001G287900 Sobic001G141900 Sobic001G141900 Sobic008G138200--Sobic001G141900 Sobic008G138200--Sobic003G063700 Sobic003G044800 Sobic003G044800 Sobic008G138200--Sobic003G044800 Sobic001G152901 Sobic001G152901 Sobic008G138200--Sobic001G152901 Sobic008G138200--Sobic001G235200 Sobic006G228000 Sobic006G228000 Sobic001G137800--Sobic006G228000 Sobic001G137800--Sobic001G235200 Sobic001G137800--Sobic003G374100 Sobic001G137800--Sobic007G043000 Sobic001G137800--Sobic002G121900 Sobic001G137800--Sobic001G235100 Sobic001G137800--Sobic006G213900 Sobic001G137800--Sobic001G216400 Sobic001G137800--Sobic007G128200 Sobic009G075500 Sobic009G075500 Sobic001G216400--Sobic009G075500 Sobic004G234600 Sobic004G234600 Sobic001G216400--Sobic004G234600 Sobic009G063700 Sobic009G063700 Sobic001G216400--Sobic009G063700 Sobic005G166100 Sobic005G166100 Sobic001G216400--Sobic005G166100 Sobic001G419500 Sobic001G419500 Sobic001G216400--Sobic001G419500 Sobic001G216400--Sobic003G381100 Sobic001G216400--Sobic006G213900 Sobic001G216400--Sobic007G193300 Sobic001G216400--Sobic004G056000 Sobic003G381100--Sobic004G056000 Sobic003G381100--Sobic001G216400 Sobic008G072900 Sobic008G072900 Sobic003G381100--Sobic008G072900 Sobic003G027200 Sobic003G027200 Sobic003G381100--Sobic003G027200 Sobic006G097300 Sobic006G097300 Sobic003G381100--Sobic006G097300 Sobic003G381100--Sobic004G254100 Sobic003G381100--Sobic007G043000 Sobic003G381100--Sobic005G166100 Sobic003G381100--Sobic007G193300 Sobic007G128200--Sobic004G234600 Sobic007G128200--Sobic009G063700 Sobic010G194600 Sobic010G194600 Sobic007G128200--Sobic010G194600 Sobic007G128200--Sobic001G216400 Sobic001G158100 Sobic001G158100 Sobic007G128200--Sobic001G158100 Sobic001G457600 Sobic001G457600 Sobic007G128200--Sobic001G457600 Sobic007G128200--Sobic004G056000 Sobic007G128200--Sobic005G166100 Sobic007G128200--Sobic007G043000 Sobic003G063700--Sobic001G235200 Sobic009G211300 Sobic009G211300 Sobic003G063700--Sobic009G211300 Sobic006G134700 Sobic006G134700 Sobic003G063700--Sobic006G134700 Sobic003G063700--Sobic006G213900 Sobic003G063700--Sobic001G158100 Sobic003G063700--Sobic001G216400 Sobic002G239101 Sobic002G239101 Sobic003G063700--Sobic002G239101 Sobic003G063700--Sobic001G141900 Sobic003G063700--Sobic008G138200
Octagon: transcription factors


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