Gene annotation
Transcriptome id Sobic.003G374100.1,Sobic.003G374100.2
Synonym BGAL10, Sb03g041450
Functional annotation beta-galactosidase precursor, putative, expressed
UniProt A0A1W0W0R3 , C5XRC3
Pfam PF13364 PF02140 PF01301
Panther DB PTHR23421 PTHR23421:SF67
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G63810 : beta-galactosidase 10
RAP-DB (Rice) LOC_Os01g65460.1,LOC_Os01g65460.2 : beta-galactosidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a026614
Brachypodium KQK10850
Barley HORVU3Hr1G081960.7 , HORVU3Hr1G081960.6 , HORVU3Hr1G081970.2 , HORVU3Hr1G081970.3 , HORVU3Hr1G081970.1 , HORVU3Hr1G081960.1 , HORVU3Hr1G081960.2 , HORVU3Hr1G081960.5 , HORVU3Hr1G081960.4 , HORVU3Hr1G081960.9 , HORVU3Hr1G081960.8 , HORVU3Hr1G081960.15 , HORVU3Hr1G081960.14 , HORVU3Hr1G081960.17 , HORVU3Hr1G081960.16 , HORVU3Hr1G081960.11 , HORVU3Hr1G081960.10 , HORVU3Hr1G081960.13 , HORVU3Hr1G081960.12
Wheat TraesCS3A02G386200 , TraesCS3A02G386200 , TraesCS3A02G386300 , TraesCS3D02G379200 , TraesCS3D02G379300 , TraesCS3B02G418400 , TraesCS3B02G418400 , TraesCS3D02G379300 , TraesCS3B02G418300 , TraesCS3B02G418300
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.003G374100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G137800 ankyrin, putative, expressed -
2 Sobic.006G228000 glycine-rich protein 2, putative -
3 Sobic.003G129200 argonaute, putative, expressed -
4 Sobic.007G043000 transcription factor X1, putative, expressed -
5 Sobic.002G121900 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2
6 Sobic.004G234600 expressed protein -
7 Sobic.002G053350 - -
8 Sobic.001G235200 MYB family transcription factor, putative, expressed -
9 Sobic.001G235100 MYB family transcription factor, putative, expressed -
10 Sobic.006G111100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@pathogenesis-related Bet v I family protein, putative, expressed -
11 Sobic.007G128200 expressed protein -
12 Sobic.003G295100 GDSL-like lipase/acylhydrolase, putative, expressed -
13 Sobic.008G137700 XH domain containing protein, expressed -
14 Sobic.003G088600 transcription factor X1, putative, expressed -
15 Sobic.010G204700 LTPL129 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.008G138200 RNA recognition motif family protein, expressed -
17 Sobic.002G239101 - -
18 Sobic.001G216400 nodulin, putative, expressed K07192: flotillin
19 Sobic.001G271600 transferase family protein, putative, expressed -
20 Sobic.006G213900 OsMADS31 - MADS-box family gene with MIKCc type-box, expressed -


Gene co-expression network
sample Sobic003G374100 Sobic003G374100 Sobic001G137800 Sobic001G137800 Sobic003G374100--Sobic001G137800 Sobic006G228000 Sobic006G228000 Sobic003G374100--Sobic006G228000 Sobic003G129200 Sobic003G129200 Sobic003G374100--Sobic003G129200 Sobic007G043000 Sobic007G043000 Sobic003G374100--Sobic007G043000 Sobic002G121900 Sobic002G121900 Sobic003G374100--Sobic002G121900 Sobic004G234600 Sobic004G234600 Sobic003G374100--Sobic004G234600 Sobic002G053350 Sobic002G053350 Sobic003G374100--Sobic002G053350 Sobic001G235200 Sobic001G235200 Sobic003G374100--Sobic001G235200 Sobic001G235100 Sobic001G235100 Sobic003G374100--Sobic001G235100 Sobic001G137800--Sobic006G228000 Sobic001G137800--Sobic001G235200 Sobic001G137800--Sobic003G374100 Sobic001G137800--Sobic007G043000 Sobic001G137800--Sobic002G121900 Sobic001G137800--Sobic001G235100 Sobic006G213900 Sobic006G213900 Sobic001G137800--Sobic006G213900 Sobic001G216400 Sobic001G216400 Sobic001G137800--Sobic001G216400 Sobic007G128200 Sobic007G128200 Sobic001G137800--Sobic007G128200 Sobic006G228000--Sobic001G137800 Sobic006G228000--Sobic003G374100 Sobic006G228000--Sobic007G043000 Sobic006G228000--Sobic001G235200 Sobic002G237000 Sobic002G237000 Sobic006G228000--Sobic002G237000 Sobic006G228000--Sobic004G234600 Sobic003G092300 Sobic003G092300 Sobic006G228000--Sobic003G092300 Sobic003G300000 Sobic003G300000 Sobic006G228000--Sobic003G300000 Sobic006G228000--Sobic002G121900 Sobic003G129200--Sobic003G374100 Sobic003G129200--Sobic004G234600 Sobic008G137700 Sobic008G137700 Sobic003G129200--Sobic008G137700 Sobic003G129200--Sobic001G137800 Sobic003G088600 Sobic003G088600 Sobic003G129200--Sobic003G088600 Sobic003G129200--Sobic002G053350 Sobic002G239101 Sobic002G239101 Sobic003G129200--Sobic002G239101 Sobic003G295100 Sobic003G295100 Sobic003G129200--Sobic003G295100 Sobic003G129200--Sobic001G235200 Sobic007G043000--Sobic001G235100 Sobic007G043000--Sobic002G121900 Sobic004G254100 Sobic004G254100 Sobic007G043000--Sobic004G254100 Sobic008G138200 Sobic008G138200 Sobic007G043000--Sobic008G138200 Sobic007G043000--Sobic001G137800 Sobic007G043000--Sobic001G216400 Sobic003G381100 Sobic003G381100 Sobic007G043000--Sobic003G381100 Sobic007G043000--Sobic007G128200 Sobic003G063700 Sobic003G063700 Sobic007G043000--Sobic003G063700 Sobic002G121900--Sobic007G043000 Sobic001G287900 Sobic001G287900 Sobic002G121900--Sobic001G287900 Sobic002G121900--Sobic001G137800 Sobic002G121900--Sobic007G128200 Sobic002G121900--Sobic001G235100 Sobic007G193300 Sobic007G193300 Sobic002G121900--Sobic007G193300 Sobic002G121900--Sobic008G138200 Sobic002G121900--Sobic003G374100 Sobic001G171200 Sobic001G171200 Sobic002G121900--Sobic001G171200 Sobic004G234600--Sobic007G128200 Sobic004G234600--Sobic001G216400 Sobic009G063700 Sobic009G063700 Sobic004G234600--Sobic009G063700 Sobic004G234600--Sobic002G053350 Sobic001G457600 Sobic001G457600 Sobic004G234600--Sobic001G457600 Sobic001G419500 Sobic001G419500 Sobic004G234600--Sobic001G419500 Sobic010G194600 Sobic010G194600 Sobic004G234600--Sobic010G194600 Sobic001G158100 Sobic001G158100 Sobic004G234600--Sobic001G158100 Sobic010G183800 Sobic010G183800 Sobic004G234600--Sobic010G183800 Sobic002G053350--Sobic004G234600 Sobic002G053350--Sobic003G088600 Sobic002G053350--Sobic008G137700 Sobic002G053350--Sobic007G128200 Sobic002G053350--Sobic001G216400 Sobic002G053350--Sobic001G419500 Sobic002G053350--Sobic010G194600 Sobic002G053350--Sobic007G193300 Sobic001G137500 Sobic001G137500 Sobic002G053350--Sobic001G137500 Sobic001G235200--Sobic006G213900 Sobic001G235200--Sobic003G063700 Sobic006G134700 Sobic006G134700 Sobic001G235200--Sobic006G134700 Sobic001G235200--Sobic002G239101 Sobic001G235200--Sobic001G137800 Sobic002G159000 Sobic002G159000 Sobic001G235200--Sobic002G159000 Sobic004G168000 Sobic004G168000 Sobic001G235200--Sobic004G168000 Sobic005G070101 Sobic005G070101 Sobic001G235200--Sobic005G070101 Sobic009G211300 Sobic009G211300 Sobic001G235200--Sobic009G211300 Sobic001G235100--Sobic007G043000 Sobic001G235100--Sobic004G254100 Sobic001G235100--Sobic008G138200 Sobic001G235100--Sobic002G121900 Sobic001G235100--Sobic001G137800 Sobic001G235100--Sobic006G213900 Sobic001G235100--Sobic001G235200 Sobic001G235100--Sobic003G063700 Sobic001G235100--Sobic001G216400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.