Gene annotation
Transcriptome id Sobic.010G204700.1
Synonym Sb10g025210
Functional annotation LTPL129 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
UniProt C5Z6N9
Pfam PF14547
Panther DB PTHR31731 PTHR31731:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G22142 : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RAP-DB (Rice) LOC_Os06g07220.1 : LTPL128 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) Zm00025a051406 , Zm00025a042072
Brachypodium -
Barley HORVU7Hr1G115830.2 , HORVU7Hr1G115810.1 , HORVU7Hr1G115850.2 , HORVU7Hr1G115850.1 , HORVU7Hr1G115830.5 , HORVU7Hr1G115830.4 , HORVU7Hr1G115830.7 , HORVU7Hr1G115830.6 , HORVU7Hr1G115830.1 , HORVU7Hr1G115830.3
Wheat TraesCS7D02G509900
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.010G204700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G374100 beta-galactosidase precursor, putative, expressed -
2 Sobic.005G020100 CDC45B - Putative DNA replication initiation protein, expressed K06628: cell division control protein 45
3 Sobic.010G230000 monocopper oxidase, putative, expressed -
4 Sobic.007G121650 - -
5 Sobic.007G007800 DNA repair metallo-beta-lactamase, putative, expressed K15340: DCLRE1A, SNM1A, DNA cross-link repair 1A protein
6 Sobic.004G238801 - -
7 Sobic.003G444000 WRKY17, expressed -
8 Sobic.006G111100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@pathogenesis-related Bet v I family protein, putative, expressed -
9 Sobic.001G439400 glycosyl hydrolase family 10 protein, putative, expressed -
10 Sobic.001G271600 transferase family protein, putative, expressed -
11 Sobic.001G456500 RPA1B - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
12 Sobic.004G215500 GDSL-like lipase/acylhydrolase, putative, expressed -
13 Sobic.006G228000 glycine-rich protein 2, putative -
14 Sobic.001G137800 ankyrin, putative, expressed -
15 Sobic.008G143300 - -
16 Sobic.002G237000 fasciclin domain containing protein, expressed -
17 Sobic.001G105800 OsFBX109 - F-box domain containing protein, expressed -
18 Sobic.004G331600 MCM5 - Putative minichromosome maintenance MCM complex subunit 5, expressed K02209: MCM5, DNA replication licensing factor MCM5
19 Sobic.007G000500 HMG1/2, putative, expressed -
20 Sobic.001G152901 "YABBY transcription factor, "(PubMedID : 22581231) -


Gene co-expression network
sample Sobic010G204700 Sobic010G204700 Sobic003G374100 Sobic003G374100 Sobic010G204700--Sobic003G374100 Sobic005G020100 Sobic005G020100 Sobic010G204700--Sobic005G020100 Sobic010G230000 Sobic010G230000 Sobic010G204700--Sobic010G230000 Sobic007G121650 Sobic007G121650 Sobic010G204700--Sobic007G121650 Sobic007G007800 Sobic007G007800 Sobic010G204700--Sobic007G007800 Sobic004G238801 Sobic004G238801 Sobic010G204700--Sobic004G238801 Sobic003G444000 Sobic003G444000 Sobic010G204700--Sobic003G444000 Sobic006G111100 Sobic006G111100 Sobic010G204700--Sobic006G111100 Sobic001G439400 Sobic001G439400 Sobic010G204700--Sobic001G439400 Sobic001G137800 Sobic001G137800 Sobic003G374100--Sobic001G137800 Sobic006G228000 Sobic006G228000 Sobic003G374100--Sobic006G228000 Sobic003G129200 Sobic003G129200 Sobic003G374100--Sobic003G129200 Sobic007G043000 Sobic007G043000 Sobic003G374100--Sobic007G043000 Sobic002G121900 Sobic002G121900 Sobic003G374100--Sobic002G121900 Sobic004G234600 Sobic004G234600 Sobic003G374100--Sobic004G234600 Sobic002G053350 Sobic002G053350 Sobic003G374100--Sobic002G053350 Sobic001G235200 Sobic001G235200 Sobic003G374100--Sobic001G235200 Sobic001G235100 Sobic001G235100 Sobic003G374100--Sobic001G235100 Sobic005G020100--Sobic007G007800 Sobic001G271600 Sobic001G271600 Sobic005G020100--Sobic001G271600 Sobic007G000500 Sobic007G000500 Sobic005G020100--Sobic007G000500 Sobic003G085900 Sobic003G085900 Sobic005G020100--Sobic003G085900 Sobic005G020100--Sobic010G204700 Sobic005G020100--Sobic003G374100 Sobic010G269700 Sobic010G269700 Sobic005G020100--Sobic010G269700 Sobic002G272300 Sobic002G272300 Sobic005G020100--Sobic002G272300 Sobic005G020100--Sobic006G228000 Sobic010G230000--Sobic010G204700 Sobic001G456500 Sobic001G456500 Sobic010G230000--Sobic001G456500 Sobic004G238700 Sobic004G238700 Sobic010G230000--Sobic004G238700 Sobic004G229200 Sobic004G229200 Sobic010G230000--Sobic004G229200 Sobic001G142000 Sobic001G142000 Sobic010G230000--Sobic001G142000 Sobic006G081800 Sobic006G081800 Sobic010G230000--Sobic006G081800 Sobic004G075900 Sobic004G075900 Sobic010G230000--Sobic004G075900 Sobic007G176800 Sobic007G176800 Sobic010G230000--Sobic007G176800 Sobic002G128000 Sobic002G128000 Sobic010G230000--Sobic002G128000 Sobic007G121600 Sobic007G121600 Sobic007G121650--Sobic007G121600 Sobic007G121650--Sobic004G238801 Sobic007G121650--Sobic007G007800 Sobic007G121650--Sobic003G129200 Sobic007G121650--Sobic003G374100 Sobic001G118800 Sobic001G118800 Sobic007G121650--Sobic001G118800 Sobic007G121650--Sobic010G204700 Sobic007G121650--Sobic005G020100 Sobic010G092400 Sobic010G092400 Sobic007G121650--Sobic010G092400 Sobic007G007800--Sobic002G272300 Sobic001G105800 Sobic001G105800 Sobic007G007800--Sobic001G105800 Sobic009G184200 Sobic009G184200 Sobic007G007800--Sobic009G184200 Sobic001G013400 Sobic001G013400 Sobic007G007800--Sobic001G013400 Sobic002G223900 Sobic002G223900 Sobic007G007800--Sobic002G223900 Sobic004G331600 Sobic004G331600 Sobic007G007800--Sobic004G331600 Sobic007G007800--Sobic005G020100 Sobic007G007800--Sobic010G092400 Sobic001G083300 Sobic001G083300 Sobic007G007800--Sobic001G083300 Sobic004G238801--Sobic007G121650 Sobic010G178300 Sobic010G178300 Sobic004G238801--Sobic010G178300 Sobic005G157300 Sobic005G157300 Sobic004G238801--Sobic005G157300 Sobic004G238801--Sobic010G204700 Sobic004G238801--Sobic002G272300 Sobic001G148450 Sobic001G148450 Sobic004G238801--Sobic001G148450 Sobic001G377700 Sobic001G377700 Sobic004G238801--Sobic001G377700 Sobic003G320300 Sobic003G320300 Sobic004G238801--Sobic003G320300 Sobic004G238801--Sobic001G439400 Sobic003G411100 Sobic003G411100 Sobic003G444000--Sobic003G411100 Sobic008G031000 Sobic008G031000 Sobic003G444000--Sobic008G031000 Sobic001G324600 Sobic001G324600 Sobic003G444000--Sobic001G324600 Sobic003G274000 Sobic003G274000 Sobic003G444000--Sobic003G274000 Sobic002G345500 Sobic002G345500 Sobic003G444000--Sobic002G345500 Sobic004G015100 Sobic004G015100 Sobic003G444000--Sobic004G015100 Sobic006G144101 Sobic006G144101 Sobic003G444000--Sobic006G144101 Sobic008G048600 Sobic008G048600 Sobic003G444000--Sobic008G048600 Sobic004G090400 Sobic004G090400 Sobic003G444000--Sobic004G090400 Sobic006G111100--Sobic003G374100 Sobic006G111100--Sobic003G274000 Sobic006G111100--Sobic002G121900 Sobic010G156100 Sobic010G156100 Sobic006G111100--Sobic010G156100 Sobic004G101200 Sobic004G101200 Sobic006G111100--Sobic004G101200 Sobic004G072900 Sobic004G072900 Sobic006G111100--Sobic004G072900 Sobic001G152901 Sobic001G152901 Sobic006G111100--Sobic001G152901 Sobic001G287900 Sobic001G287900 Sobic006G111100--Sobic001G287900 Sobic006G111100--Sobic001G137800 Sobic001G439400--Sobic004G238700 Sobic001G439400--Sobic010G204700 Sobic001G439400--Sobic004G238801 Sobic005G024000 Sobic005G024000 Sobic001G439400--Sobic005G024000 Sobic001G439400--Sobic003G444000 Sobic001G439400--Sobic010G230000 Sobic008G119900 Sobic008G119900 Sobic001G439400--Sobic008G119900 Sobic001G009100 Sobic001G009100 Sobic001G439400--Sobic001G009100 Sobic001G146900 Sobic001G146900 Sobic001G439400--Sobic001G146900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.