Gene annotation
| Transcriptome id | Sobic.001G271600.3,Sobic.001G271600.1,Sobic.001G271600.2,Sobic.001G271600.4 |
|---|---|
| Synonym | Sb01g026670 |
| Functional annotation | transferase family protein, putative, expressed |
| UniProt | A0A1Z5S7T7 , C5WPS2 , A0A1Z5S7T8 , A0A1Z5S7U8 |
| Pfam | PF02458 |
| Panther DB | PTHR31642 PTHR31642:SF52 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups |
Orthologs (automatic annotation)
| TAIR | AT5G17540 : HXXXD-type acyl-transferase family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os10g11980.1 : transferase family protein, putative, expressed |
| MaizeGDB (Corn) | Zm00025a003711 |
| Brachypodium | - |
| Barley | HORVU1Hr1G074510.2 , HORVU1Hr1G074510.3 , HORVU1Hr1G074510.1 , HORVU7Hr1G026190.1 |
| Wheat | TraesCS1A02G270000 , TraesCS1D02G270000 , TraesCS1B02G280400 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.003G365800 | expressed protein | - |
| 2 | Sobic.005G020100 | CDC45B - Putative DNA replication initiation protein, expressed | K06628: cell division control protein 45 |
| 3 | Sobic.003G374100 | beta-galactosidase precursor, putative, expressed | - |
| 4 | Sobic.006G107500 | MYB family transcription factor, putative, expressed | K09422: transcription factor MYB, plant |
| 5 | Sobic.006G228000 | glycine-rich protein 2, putative | - |
| 6 | Sobic.003G295100 | GDSL-like lipase/acylhydrolase, putative, expressed | - |
| 7 | Sobic.003G090600 | seven in absentia protein family protein, putative, expressed | - |
| 8 | Sobic.009G169800 | DEFL4 - Defensin and Defensin-like DEFL family, expressed | - |
| 9 | Sobic.003G085900 | Glycosyl hydrolase. predicted target of sbi-miR-5568 and sbi-miR-6220 expressed in the stems of sweet sorghum(PubMedID : 26117170)@glycosyl hydrolase, family 31, putative, expressed | K15925: alpha-D-xyloside xylohydrolase |
| 10 | Sobic.004G343700 | serine/threonine-protein kinase, putative, expressed | - |
| 11 | Sobic.002G430700 | glycosyltransferase family 43 protein, putative, expressed | - |
| 12 | Sobic.003G283400 | GDSL-like lipase/acylhydrolase, putative, expressed | - |
| 13 | Sobic.003G019900 | GDSL-like lipase/acylhydrolase, putative, expressed | - |
| 14 | Sobic.003G383700 | "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed | - |
| 15 | Sobic.003G373900 | universal stress protein domain containing protein, putative, expressed | - |
| 16 | Sobic.007G023100 | CCT motif family protein, expressed | - |
| 17 | Sobic.001G074000 | receptor protein kinase CLAVATA1 precursor, putative, expressed | - |
| 18 | Sobic.004G215500 | GDSL-like lipase/acylhydrolase, putative, expressed | - |
| 19 | Sobic.002G360600 | expressed protein | - |
| 20 | Sobic.010G204700 | LTPL129 - Protease inhibitor/seed storage/LTP family protein precursor, expressed | - |
Gene co-expression network
Octagon: transcription factors
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