Gene annotation
Transcriptome id Sobic.007G023100.1,Sobic.007G023100.2
Synonym Sb07g002040
Functional annotation CCT motif family protein, expressed
UniProt A0A1Z5R7V5 , A0A1B6PF44
Pfam PF06203
Panther DB PTHR31874 PTHR31874:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G14370 : CCT motif family protein
RAP-DB (Rice) LOC_Os06g15330.1 : CCT/B-box zinc finger protein, putative, expressed
MaizeGDB (Corn) Zm00025a030220 , Zm00025a040317
Brachypodium -
Barley -
Wheat TraesCS7A02G314300 , TraesCS7D02G311500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G090600 seven in absentia protein family protein, putative, expressed -
2 Sobic.007G147200 OsSub56 - Putative Subtilisin homologue, expressed -
3 Sobic.002G430700 glycosyltransferase family 43 protein, putative, expressed -
4 Sobic.006G107500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
5 Sobic.005G062600 MLO domain containing protein, putative, expressed K08472: mlo protein
6 Sobic.007G033700 OsFBX309 - F-box domain containing protein, expressed -
7 Sobic.003G019900 GDSL-like lipase/acylhydrolase, putative, expressed -
8 Sobic.007G128100 expressed protein -
9 Sobic.006G163300 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
10 Sobic.003G008800 expressed protein -
11 Sobic.001G271600 transferase family protein, putative, expressed -
12 Sobic.001G463301 - -
13 Sobic.010G014500 aspartic protease, putative, expressed -
14 Sobic.010G070900 keratin, type I cytoskeletal 9, putative, expressed -
15 Sobic.003G046400 transcriptional corepressor LEUNIG, putative, expressed -
16 Sobic.002G360600 expressed protein -
17 Sobic.001G464800 cyclin, putative, expressed K18811: cyclin D5, plant
18 Sobic.003G085900 Glycosyl hydrolase. predicted target of sbi-miR-5568 and sbi-miR-6220 expressed in the stems of sweet sorghum(PubMedID : 26117170)@glycosyl hydrolase, family 31, putative, expressed K15925: alpha-D-xyloside xylohydrolase
19 Sobic.001G137600 ankyrin, putative, expressed -
20 Sobic.010G276600 PAZ domain containing protein, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C


Gene co-expression network
sample Sobic007G023100 Sobic007G023100 Sobic003G090600 Sobic003G090600 Sobic007G023100--Sobic003G090600 Sobic007G147200 Sobic007G147200 Sobic007G023100--Sobic007G147200 Sobic002G430700 Sobic002G430700 Sobic007G023100--Sobic002G430700 Sobic006G107500 Sobic006G107500 Sobic007G023100--Sobic006G107500 Sobic005G062600 Sobic005G062600 Sobic007G023100--Sobic005G062600 Sobic007G033700 Sobic007G033700 Sobic007G023100--Sobic007G033700 Sobic003G019900 Sobic003G019900 Sobic007G023100--Sobic003G019900 Sobic007G128100 Sobic007G128100 Sobic007G023100--Sobic007G128100 Sobic006G163300 Sobic006G163300 Sobic007G023100--Sobic006G163300 Sobic003G090600--Sobic002G430700 Sobic003G085900 Sobic003G085900 Sobic003G090600--Sobic003G085900 Sobic003G090600--Sobic007G023100 Sobic003G090600--Sobic006G107500 Sobic001G271600 Sobic001G271600 Sobic003G090600--Sobic001G271600 Sobic003G090600--Sobic006G163300 Sobic006G271600 Sobic006G271600 Sobic003G090600--Sobic006G271600 Sobic002G360600 Sobic002G360600 Sobic003G090600--Sobic002G360600 Sobic003G046400 Sobic003G046400 Sobic003G090600--Sobic003G046400 Sobic010G070900 Sobic010G070900 Sobic007G147200--Sobic010G070900 Sobic010G255000 Sobic010G255000 Sobic007G147200--Sobic010G255000 Sobic004G003700 Sobic004G003700 Sobic007G147200--Sobic004G003700 Sobic007G147200--Sobic003G046400 Sobic007G147200--Sobic006G163300 Sobic001G143400 Sobic001G143400 Sobic007G147200--Sobic001G143400 Sobic007G147200--Sobic003G019900 Sobic007G147200--Sobic006G107500 Sobic001G101700 Sobic001G101700 Sobic007G147200--Sobic001G101700 Sobic002G430700--Sobic006G107500 Sobic002G430700--Sobic003G085900 Sobic002G430700--Sobic006G163300 Sobic002G430700--Sobic002G360600 Sobic002G430700--Sobic010G070900 Sobic002G430700--Sobic003G090600 Sobic002G430700--Sobic003G046400 Sobic002G430700--Sobic007G147200 Sobic010G014500 Sobic010G014500 Sobic002G430700--Sobic010G014500 Sobic006G107500--Sobic002G360600 Sobic006G107500--Sobic010G070900 Sobic010G087600 Sobic010G087600 Sobic006G107500--Sobic010G087600 Sobic006G107500--Sobic003G085900 Sobic006G107500--Sobic006G163300 Sobic009G146700 Sobic009G146700 Sobic006G107500--Sobic009G146700 Sobic006G107500--Sobic007G147200 Sobic006G107500--Sobic002G430700 Sobic003G338700 Sobic003G338700 Sobic006G107500--Sobic003G338700 Sobic004G267600 Sobic004G267600 Sobic005G062600--Sobic004G267600 Sobic010G092400 Sobic010G092400 Sobic005G062600--Sobic010G092400 Sobic007G121600 Sobic007G121600 Sobic005G062600--Sobic007G121600 Sobic001G079900 Sobic001G079900 Sobic005G062600--Sobic001G079900 Sobic010G129700 Sobic010G129700 Sobic005G062600--Sobic010G129700 Sobic007G161600 Sobic007G161600 Sobic005G062600--Sobic007G161600 Sobic001G493900 Sobic001G493900 Sobic005G062600--Sobic001G493900 Sobic008G070700 Sobic008G070700 Sobic005G062600--Sobic008G070700 Sobic005G062600--Sobic003G019900 Sobic007G033700--Sobic003G046400 Sobic009G243000 Sobic009G243000 Sobic007G033700--Sobic009G243000 Sobic001G137600 Sobic001G137600 Sobic007G033700--Sobic001G137600 Sobic001G455900 Sobic001G455900 Sobic007G033700--Sobic001G455900 Sobic007G033700--Sobic006G163300 Sobic007G033700--Sobic010G070900 Sobic007G033700--Sobic006G271600 Sobic001G071600 Sobic001G071600 Sobic007G033700--Sobic001G071600 Sobic004G237000 Sobic004G237000 Sobic007G033700--Sobic004G237000 Sobic006G274200 Sobic006G274200 Sobic003G019900--Sobic006G274200 Sobic003G019900--Sobic001G493900 Sobic003G019900--Sobic003G338700 Sobic008G151600 Sobic008G151600 Sobic003G019900--Sobic008G151600 Sobic003G019900--Sobic007G147200 Sobic003G019900--Sobic010G014500 Sobic003G019900--Sobic006G163300 Sobic001G074000 Sobic001G074000 Sobic003G019900--Sobic001G074000 Sobic003G019900--Sobic004G267600 Sobic007G128100--Sobic007G023100 Sobic007G128100--Sobic005G062600 Sobic007G128100--Sobic007G161600 Sobic008G038200 Sobic008G038200 Sobic007G128100--Sobic008G038200 Sobic001G298800 Sobic001G298800 Sobic007G128100--Sobic001G298800 Sobic003G027800 Sobic003G027800 Sobic007G128100--Sobic003G027800 Sobic007G128100--Sobic003G019900 Sobic007G128100--Sobic008G151600 Sobic003G008800 Sobic003G008800 Sobic007G128100--Sobic003G008800 Sobic006G163300--Sobic002G360600 Sobic006G163300--Sobic001G455900 Sobic006G163300--Sobic003G046400 Sobic003G010700 Sobic003G010700 Sobic006G163300--Sobic003G010700 Sobic006G163300--Sobic010G070900 Sobic006G163300--Sobic007G147200 Sobic006G163300--Sobic007G033700 Sobic006G163300--Sobic006G107500 Sobic001G101900 Sobic001G101900 Sobic006G163300--Sobic001G101900
Octagon: transcription factors


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