Gene annotation
Transcriptome id Sobic.010G014500.1
Synonym Sb10g001440
Functional annotation aspartic protease, putative, expressed
UniProt C5Z2V8
Pfam PF14541 PF14543
Panther DB PTHR13683 PTHR13683:SF330
NCBI CDD KOG1339; Aspartyl protease
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004190aspartic-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT5G10770 : Eukaryotic aspartyl protease family protein
RAP-DB (Rice) LOC_Os06g02780.1 : aspartic protease, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G338700 LTPL16 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.010G077000 "Upregulated in leave and stem in response to drouht stress, not expredded in roots"(PubMedID : 31615416)@receptor-like protein kinase 5 precursor, putative, expressed -
3 Sobic.005G199700 leucine-rich repeat family protein, putative, expressed -
4 Sobic.003G019900 GDSL-like lipase/acylhydrolase, putative, expressed -
5 Sobic.010G014700 expressed protein -
6 Sobic.009G146700 universal stress protein domain containing protein, putative, expressed -
7 Sobic.001G299600 GATA zinc finger domain containing protein, expressed -
8 Sobic.007G165800 SLG(Ortholog in rice:Feng et al. (2016))(PubMedID : 31659908)@transferase family protein, putative, expressed -
9 Sobic.007G180200 NC domain-containing protein, putative, expressed -
10 Sobic.004G003700 Trihelix Family(PubMedID : 24864043)@expressed protein -
11 Sobic.001G493900 beta-galactosidase, putative, expressed -
12 Sobic.006G107500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
13 Sobic.007G147200 OsSub56 - Putative Subtilisin homologue, expressed -
14 Sobic.010G070900 keratin, type I cytoskeletal 9, putative, expressed -
15 Sobic.002G430700 glycosyltransferase family 43 protein, putative, expressed -
16 Sobic.001G074000 receptor protein kinase CLAVATA1 precursor, putative, expressed -
17 Sobic.010G168700 GDSL-like lipase/acylhydrolase, putative, expressed -
18 Sobic.001G199400 monocopper oxidase, putative, expressed -
19 Sobic.006G163300 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
20 Sobic.001G522300 leucine-rich repeat transmembrane protein kinase, putative, expressed -


Gene co-expression network
sample Sobic010G014500 Sobic010G014500 Sobic003G338700 Sobic003G338700 Sobic010G014500--Sobic003G338700 Sobic010G077000 Sobic010G077000 Sobic010G014500--Sobic010G077000 Sobic005G199700 Sobic005G199700 Sobic010G014500--Sobic005G199700 Sobic003G019900 Sobic003G019900 Sobic010G014500--Sobic003G019900 Sobic010G014700 Sobic010G014700 Sobic010G014500--Sobic010G014700 Sobic009G146700 Sobic009G146700 Sobic010G014500--Sobic009G146700 Sobic001G299600 Sobic001G299600 Sobic010G014500--Sobic001G299600 Sobic007G165800 Sobic007G165800 Sobic010G014500--Sobic007G165800 Sobic007G180200 Sobic007G180200 Sobic010G014500--Sobic007G180200 Sobic003G338700--Sobic009G146700 Sobic003G338700--Sobic005G199700 Sobic003G338700--Sobic010G014500 Sobic003G338700--Sobic010G014700 Sobic002G363300 Sobic002G363300 Sobic003G338700--Sobic002G363300 Sobic001G286700 Sobic001G286700 Sobic003G338700--Sobic001G286700 Sobic003G338700--Sobic007G180200 Sobic001G199400 Sobic001G199400 Sobic003G338700--Sobic001G199400 Sobic003G338700--Sobic003G019900 Sobic010G077000--Sobic003G338700 Sobic010G077000--Sobic010G014500 Sobic010G077000--Sobic003G019900 Sobic004G003700 Sobic004G003700 Sobic010G077000--Sobic004G003700 Sobic006G163300 Sobic006G163300 Sobic010G077000--Sobic006G163300 Sobic001G379900 Sobic001G379900 Sobic010G077000--Sobic001G379900 Sobic001G493900 Sobic001G493900 Sobic010G077000--Sobic001G493900 Sobic003G010700 Sobic003G010700 Sobic010G077000--Sobic003G010700 Sobic007G147200 Sobic007G147200 Sobic010G077000--Sobic007G147200 Sobic005G199700--Sobic009G146700 Sobic005G199700--Sobic003G338700 Sobic005G199700--Sobic002G363300 Sobic005G199700--Sobic007G180200 Sobic005G199700--Sobic001G286700 Sobic006G273600 Sobic006G273600 Sobic005G199700--Sobic006G273600 Sobic005G199700--Sobic003G010700 Sobic003G027100 Sobic003G027100 Sobic005G199700--Sobic003G027100 Sobic005G199700--Sobic010G014700 Sobic006G274200 Sobic006G274200 Sobic003G019900--Sobic006G274200 Sobic003G019900--Sobic001G493900 Sobic003G019900--Sobic003G338700 Sobic008G151600 Sobic008G151600 Sobic003G019900--Sobic008G151600 Sobic003G019900--Sobic007G147200 Sobic003G019900--Sobic010G014500 Sobic003G019900--Sobic006G163300 Sobic001G074000 Sobic001G074000 Sobic003G019900--Sobic001G074000 Sobic004G267600 Sobic004G267600 Sobic003G019900--Sobic004G267600 Sobic010G014700--Sobic003G338700 Sobic010G014700--Sobic009G146700 Sobic010G014700--Sobic001G199400 Sobic010G014700--Sobic005G199700 Sobic010G014700--Sobic002G363300 Sobic010G014700--Sobic010G014500 Sobic010G014700--Sobic007G180200 Sobic010G014700--Sobic003G027100 Sobic004G215400 Sobic004G215400 Sobic010G014700--Sobic004G215400 Sobic009G146700--Sobic005G199700 Sobic009G146700--Sobic003G338700 Sobic009G146700--Sobic002G363300 Sobic009G146700--Sobic010G014700 Sobic009G146700--Sobic003G010700 Sobic009G146700--Sobic001G286700 Sobic009G146700--Sobic007G180200 Sobic006G107500 Sobic006G107500 Sobic009G146700--Sobic006G107500 Sobic009G146700--Sobic010G014500 Sobic001G299600--Sobic007G180200 Sobic001G299600--Sobic010G014500 Sobic001G488900 Sobic001G488900 Sobic001G299600--Sobic001G488900 Sobic001G299600--Sobic003G338700 Sobic001G299600--Sobic005G199700 Sobic001G299600--Sobic001G199400 Sobic001G155700 Sobic001G155700 Sobic001G299600--Sobic001G155700 Sobic001G299600--Sobic007G165800 Sobic001G299600--Sobic001G493900 Sobic004G274600 Sobic004G274600 Sobic007G165800--Sobic004G274600 Sobic001G434100 Sobic001G434100 Sobic007G165800--Sobic001G434100 Sobic007G165800--Sobic007G180200 Sobic007G165800--Sobic001G286700 Sobic007G165800--Sobic003G027100 Sobic010G235300 Sobic010G235300 Sobic007G165800--Sobic010G235300 Sobic007G165800--Sobic001G199400 Sobic007G170100 Sobic007G170100 Sobic007G165800--Sobic007G170100 Sobic007G165800--Sobic003G338700 Sobic007G180200--Sobic005G199700 Sobic007G180200--Sobic007G165800 Sobic007G180200--Sobic001G299600 Sobic007G180200--Sobic003G338700 Sobic007G180200--Sobic003G027100 Sobic007G180200--Sobic009G146700 Sobic007G180200--Sobic001G199400 Sobic007G180200--Sobic010G014700 Sobic007G180200--Sobic010G235300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.