Gene annotation
Transcriptome id Sobic.002G430700.1
Synonym IRX9, Sb02g044020
Functional annotation glycosyltransferase family 43 protein, putative, expressed
UniProt C5X6H1
Pfam PF03360
Panther DB PTHR10896 PTHR10896:SF26
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0015018galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity


Orthologs (automatic annotation)
TAIR AT2G37090 : Nucleotide-diphospho-sugar transferases superfamily protein
RAP-DB (Rice) LOC_Os07g49370.1 : glycosyltransferase family 43 protein, putative, expressed
MaizeGDB (Corn) Zm00025a015519
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G107500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
2 Sobic.003G085900 Glycosyl hydrolase. predicted target of sbi-miR-5568 and sbi-miR-6220 expressed in the stems of sweet sorghum(PubMedID : 26117170)@glycosyl hydrolase, family 31, putative, expressed K15925: alpha-D-xyloside xylohydrolase
3 Sobic.006G163300 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
4 Sobic.002G360600 expressed protein -
5 Sobic.010G070900 keratin, type I cytoskeletal 9, putative, expressed -
6 Sobic.003G090600 seven in absentia protein family protein, putative, expressed -
7 Sobic.003G046400 transcriptional corepressor LEUNIG, putative, expressed -
8 Sobic.007G147200 OsSub56 - Putative Subtilisin homologue, expressed -
9 Sobic.010G014500 aspartic protease, putative, expressed -
10 Sobic.007G033700 OsFBX309 - F-box domain containing protein, expressed -
11 Sobic.010G077000 "Upregulated in leave and stem in response to drouht stress, not expredded in roots"(PubMedID : 31615416)@receptor-like protein kinase 5 precursor, putative, expressed -
12 Sobic.007G023100 CCT motif family protein, expressed -
13 Sobic.006G014400 pectate lyase precursor, putative, expressed K01728: pectate lyase
14 Sobic.001G464800 cyclin, putative, expressed K18811: cyclin D5, plant
15 Sobic.001G271600 transferase family protein, putative, expressed -
16 Sobic.010G092400 glycosyl transferase 8 domain containing protein, putative, expressed -
17 Sobic.003G019900 GDSL-like lipase/acylhydrolase, putative, expressed -
18 Sobic.001G455900 "qGL3-2/qLGY3(Ortholog in rice:Yu et al., 2018/Liu et al., 2018)"(PubMedID : 31659846)@determinacy of the spikelet meristem and determining the identity of lemmas and paleas(PubMedID : 15208396)@OsMADS1 - MADS-box family gene with MIKCc type-box, expressed -
19 Sobic.006G271600 RNA recognition motif containing protein, putative, expressed K13126: polyadenylate-binding protein
20 Sobic.003G316601 - -


Gene co-expression network
sample Sobic002G430700 Sobic002G430700 Sobic006G107500 Sobic006G107500 Sobic002G430700--Sobic006G107500 Sobic003G085900 Sobic003G085900 Sobic002G430700--Sobic003G085900 Sobic006G163300 Sobic006G163300 Sobic002G430700--Sobic006G163300 Sobic002G360600 Sobic002G360600 Sobic002G430700--Sobic002G360600 Sobic010G070900 Sobic010G070900 Sobic002G430700--Sobic010G070900 Sobic003G090600 Sobic003G090600 Sobic002G430700--Sobic003G090600 Sobic003G046400 Sobic003G046400 Sobic002G430700--Sobic003G046400 Sobic007G147200 Sobic007G147200 Sobic002G430700--Sobic007G147200 Sobic010G014500 Sobic010G014500 Sobic002G430700--Sobic010G014500 Sobic006G107500--Sobic002G360600 Sobic006G107500--Sobic010G070900 Sobic010G087600 Sobic010G087600 Sobic006G107500--Sobic010G087600 Sobic006G107500--Sobic003G085900 Sobic006G107500--Sobic006G163300 Sobic009G146700 Sobic009G146700 Sobic006G107500--Sobic009G146700 Sobic006G107500--Sobic007G147200 Sobic006G107500--Sobic002G430700 Sobic003G338700 Sobic003G338700 Sobic006G107500--Sobic003G338700 Sobic003G085900--Sobic006G107500 Sobic003G085900--Sobic002G360600 Sobic004G237000 Sobic004G237000 Sobic003G085900--Sobic004G237000 Sobic010G092400 Sobic010G092400 Sobic003G085900--Sobic010G092400 Sobic003G085900--Sobic002G430700 Sobic003G085900--Sobic007G147200 Sobic003G085900--Sobic006G163300 Sobic003G085900--Sobic003G046400 Sobic003G316601 Sobic003G316601 Sobic003G085900--Sobic003G316601 Sobic006G163300--Sobic002G360600 Sobic001G455900 Sobic001G455900 Sobic006G163300--Sobic001G455900 Sobic006G163300--Sobic003G046400 Sobic003G010700 Sobic003G010700 Sobic006G163300--Sobic003G010700 Sobic006G163300--Sobic010G070900 Sobic006G163300--Sobic007G147200 Sobic007G033700 Sobic007G033700 Sobic006G163300--Sobic007G033700 Sobic006G163300--Sobic006G107500 Sobic001G101900 Sobic001G101900 Sobic006G163300--Sobic001G101900 Sobic002G360600--Sobic006G107500 Sobic002G360600--Sobic006G163300 Sobic002G360600--Sobic010G087600 Sobic002G360600--Sobic010G070900 Sobic002G360600--Sobic003G010700 Sobic002G360600--Sobic003G085900 Sobic002G360600--Sobic009G146700 Sobic002G360600--Sobic003G338700 Sobic002G360600--Sobic003G046400 Sobic010G070900--Sobic007G147200 Sobic010G070900--Sobic002G360600 Sobic010G070900--Sobic003G046400 Sobic010G070900--Sobic006G163300 Sobic010G070900--Sobic006G107500 Sobic002G426000 Sobic002G426000 Sobic010G070900--Sobic002G426000 Sobic010G070900--Sobic007G033700 Sobic010G168700 Sobic010G168700 Sobic010G070900--Sobic010G168700 Sobic001G143400 Sobic001G143400 Sobic010G070900--Sobic001G143400 Sobic003G090600--Sobic002G430700 Sobic003G090600--Sobic003G085900 Sobic007G023100 Sobic007G023100 Sobic003G090600--Sobic007G023100 Sobic003G090600--Sobic006G107500 Sobic001G271600 Sobic001G271600 Sobic003G090600--Sobic001G271600 Sobic003G090600--Sobic006G163300 Sobic006G271600 Sobic006G271600 Sobic003G090600--Sobic006G271600 Sobic003G090600--Sobic002G360600 Sobic003G090600--Sobic003G046400 Sobic003G046400--Sobic001G455900 Sobic001G071600 Sobic001G071600 Sobic003G046400--Sobic001G071600 Sobic003G046400--Sobic007G033700 Sobic001G106500 Sobic001G106500 Sobic003G046400--Sobic001G106500 Sobic003G046400--Sobic006G271600 Sobic010G183800 Sobic010G183800 Sobic003G046400--Sobic010G183800 Sobic003G046400--Sobic006G163300 Sobic003G046400--Sobic010G070900 Sobic009G048300 Sobic009G048300 Sobic003G046400--Sobic009G048300 Sobic007G147200--Sobic010G070900 Sobic010G255000 Sobic010G255000 Sobic007G147200--Sobic010G255000 Sobic004G003700 Sobic004G003700 Sobic007G147200--Sobic004G003700 Sobic007G147200--Sobic003G046400 Sobic007G147200--Sobic006G163300 Sobic007G147200--Sobic001G143400 Sobic003G019900 Sobic003G019900 Sobic007G147200--Sobic003G019900 Sobic007G147200--Sobic006G107500 Sobic001G101700 Sobic001G101700 Sobic007G147200--Sobic001G101700 Sobic010G014500--Sobic003G338700 Sobic010G077000 Sobic010G077000 Sobic010G014500--Sobic010G077000 Sobic005G199700 Sobic005G199700 Sobic010G014500--Sobic005G199700 Sobic010G014500--Sobic003G019900 Sobic010G014700 Sobic010G014700 Sobic010G014500--Sobic010G014700 Sobic010G014500--Sobic009G146700 Sobic001G299600 Sobic001G299600 Sobic010G014500--Sobic001G299600 Sobic007G165800 Sobic007G165800 Sobic010G014500--Sobic007G165800 Sobic007G180200 Sobic007G180200 Sobic010G014500--Sobic007G180200
Octagon: transcription factors


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