Gene annotation
Transcriptome id Sobic.007G165800.1
Synonym PEL3, DCR, Sb07g023870, EMB3009
Functional annotation SLG(Ortholog in rice:Feng et al. (2016)) (PubMedID : 31659908)
transferase family protein, putative, expressed
UniProt C5YMV0
Pfam PF02458
Panther DB PTHR31896 PTHR31896:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups


Orthologs (automatic annotation)
TAIR AT5G23940 : HXXXD-type acyl-transferase family protein
RAP-DB (Rice) LOC_Os08g44840.1 : transferase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a005557
Brachypodium KQJ94674
Barley HORVU1Hr1G075900.2 , HORVU1Hr1G075900.3 , HORVU1Hr1G075900.1 , HORVU1Hr1G075900.4 , HORVU1Hr1G002890.2 , HORVU1Hr1G002890.1
Wheat TraesCS1A02G341300 , TraesCS1D02G343400 , TraesCS1B02G354000
Populus -


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cDNA sequences
Sobic.007G165800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G274600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower and stem, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
2 Sobic.001G434100 NB-ARC/LRR disease resistance protein, putative, expressed K13459: disease resistance protein RPS2
3 Sobic.007G180200 NC domain-containing protein, putative, expressed -
4 Sobic.001G286700 homeobox and START domains containing protein, putative, expressed -
5 Sobic.003G027100 keratin, type I cytoskeletal 9, putative, expressed -
6 Sobic.010G235300 acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
7 Sobic.001G199400 monocopper oxidase, putative, expressed -
8 Sobic.007G170100 male sterility protein 2, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
9 Sobic.003G338700 LTPL16 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
10 Sobic.010G078700 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
11 Sobic.010G014500 aspartic protease, putative, expressed -
12 Sobic.005G199700 leucine-rich repeat family protein, putative, expressed -
13 Sobic.001G470200 membrane associated DUF588 domain containing protein, putative, expressed -
14 Sobic.004G357000 inactive receptor kinase At2g26730 precursor, putative, expressed -
15 Sobic.002G363300 - -
16 Sobic.006G273600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.010G014700 expressed protein -
18 Sobic.004G211700 - -
19 Sobic.010G020600 Receptor-like protein kinase 5 precursor(PubMedID : 28620409)@receptor-like protein kinase 5 precursor, putative, expressed -
20 Sobic.009G235700 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8


Gene co-expression network
sample Sobic007G165800 Sobic007G165800 Sobic004G274600 Sobic004G274600 Sobic007G165800--Sobic004G274600 Sobic001G434100 Sobic001G434100 Sobic007G165800--Sobic001G434100 Sobic007G180200 Sobic007G180200 Sobic007G165800--Sobic007G180200 Sobic001G286700 Sobic001G286700 Sobic007G165800--Sobic001G286700 Sobic003G027100 Sobic003G027100 Sobic007G165800--Sobic003G027100 Sobic010G235300 Sobic010G235300 Sobic007G165800--Sobic010G235300 Sobic001G199400 Sobic001G199400 Sobic007G165800--Sobic001G199400 Sobic007G170100 Sobic007G170100 Sobic007G165800--Sobic007G170100 Sobic003G338700 Sobic003G338700 Sobic007G165800--Sobic003G338700 Sobic004G274600--Sobic007G165800 Sobic004G211700 Sobic004G211700 Sobic004G274600--Sobic004G211700 Sobic004G274600--Sobic001G434100 Sobic004G274600--Sobic001G286700 Sobic001G207600 Sobic001G207600 Sobic004G274600--Sobic001G207600 Sobic008G097700 Sobic008G097700 Sobic004G274600--Sobic008G097700 Sobic008G008100 Sobic008G008100 Sobic004G274600--Sobic008G008100 Sobic004G274600--Sobic003G027100 Sobic003G298700 Sobic003G298700 Sobic004G274600--Sobic003G298700 Sobic001G434100--Sobic007G165800 Sobic001G434100--Sobic004G274600 Sobic001G434100--Sobic001G286700 Sobic001G434100--Sobic003G027100 Sobic001G434100--Sobic001G199400 Sobic001G470200 Sobic001G470200 Sobic001G434100--Sobic001G470200 Sobic007G032100 Sobic007G032100 Sobic001G434100--Sobic007G032100 Sobic001G434100--Sobic010G235300 Sobic004G357000 Sobic004G357000 Sobic001G434100--Sobic004G357000 Sobic005G199700 Sobic005G199700 Sobic007G180200--Sobic005G199700 Sobic007G180200--Sobic007G165800 Sobic001G299600 Sobic001G299600 Sobic007G180200--Sobic001G299600 Sobic007G180200--Sobic003G338700 Sobic007G180200--Sobic003G027100 Sobic009G146700 Sobic009G146700 Sobic007G180200--Sobic009G146700 Sobic007G180200--Sobic001G199400 Sobic010G014700 Sobic010G014700 Sobic007G180200--Sobic010G014700 Sobic007G180200--Sobic010G235300 Sobic001G286700--Sobic010G235300 Sobic001G286700--Sobic003G027100 Sobic002G363300 Sobic002G363300 Sobic001G286700--Sobic002G363300 Sobic001G286700--Sobic004G211700 Sobic006G273600 Sobic006G273600 Sobic001G286700--Sobic006G273600 Sobic001G473500 Sobic001G473500 Sobic001G286700--Sobic001G473500 Sobic001G286700--Sobic003G338700 Sobic001G286700--Sobic005G199700 Sobic001G286700--Sobic007G165800 Sobic003G178500 Sobic003G178500 Sobic003G027100--Sobic003G178500 Sobic003G027100--Sobic002G363300 Sobic003G027100--Sobic001G286700 Sobic003G027100--Sobic010G235300 Sobic003G027100--Sobic004G211700 Sobic010G166300 Sobic010G166300 Sobic003G027100--Sobic010G166300 Sobic003G027100--Sobic007G165800 Sobic005G034500 Sobic005G034500 Sobic003G027100--Sobic005G034500 Sobic002G312300 Sobic002G312300 Sobic003G027100--Sobic002G312300 Sobic010G235300--Sobic001G286700 Sobic005G009600 Sobic005G009600 Sobic010G235300--Sobic005G009600 Sobic010G235300--Sobic006G273600 Sobic010G235300--Sobic003G027100 Sobic010G235300--Sobic007G170100 Sobic010G235300--Sobic007G165800 Sobic010G235300--Sobic010G166300 Sobic010G235300--Sobic003G178500 Sobic010G235300--Sobic002G363300 Sobic001G199400--Sobic010G014700 Sobic003G113500 Sobic003G113500 Sobic001G199400--Sobic003G113500 Sobic001G199400--Sobic003G027100 Sobic001G199400--Sobic003G338700 Sobic001G199400--Sobic007G165800 Sobic010G078700 Sobic010G078700 Sobic001G199400--Sobic010G078700 Sobic003G070600 Sobic003G070600 Sobic001G199400--Sobic003G070600 Sobic001G199400--Sobic007G180200 Sobic001G074000 Sobic001G074000 Sobic001G199400--Sobic001G074000 Sobic007G170100--Sobic006G273600 Sobic007G170100--Sobic005G009600 Sobic007G170100--Sobic010G235300 Sobic003G010700 Sobic003G010700 Sobic007G170100--Sobic003G010700 Sobic007G170100--Sobic002G363300 Sobic007G170100--Sobic001G286700 Sobic007G170100--Sobic007G165800 Sobic007G170100--Sobic005G199700 Sobic007G170100--Sobic003G027100 Sobic003G338700--Sobic009G146700 Sobic003G338700--Sobic005G199700 Sobic010G014500 Sobic010G014500 Sobic003G338700--Sobic010G014500 Sobic003G338700--Sobic010G014700 Sobic003G338700--Sobic002G363300 Sobic003G338700--Sobic001G286700 Sobic003G338700--Sobic007G180200 Sobic003G338700--Sobic001G199400 Sobic003G019900 Sobic003G019900 Sobic003G338700--Sobic003G019900
Octagon: transcription factors


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